Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609202
Identifier: 120609202
GI number: 120609202
Start: 544457
End: 545341
Strand: Direct
Name: 120609202
Synonym: Aave_0500
Alternate gene names: NA
Gene position: 544457-545341 (Clockwise)
Preceding gene: 120609201
Following gene: 120609213
Centisome position: 10.17
GC content: 66.33
Gene sequence:
>885_bases ATGGTGGACCCCAAACCTCCGAAGATCTACGGTCTGATCCCCAGGTACGGGCAGGGCAGGCTACTACGCTGGTCAGTATC GATCACCCGCGGTGGGGAGCACTTCGATAAGGAATTCCGGGTTGCCACGTACGATGACCCGGAGAAGGCCAAAGCCGCGG CGATCGCCTATCGGGATGAACTGCTCAAGCGAGTCCCGGCCACGAGCCGGCGCGACTTCGCGACGATCGTCCGTTCCAAC AACACGTCTGGCGTACCTGGCGTGGTTCGCAGGGAGGAGAACGGCTTTGCGCGGTGGTGCGCGATGGTGTCTCTGCCGAA CGGGAAGACCCGCAGGCGTACGTTCGCCGTGACGAAGTACGGTGAGGACCAGGCGCGGGAAAGGGCCATCAAAGCCCGGC TCGAATTGCTCACGCTGATCGACGGATGGTTCGTGCACCATCCGGATGCCGTACCGGAGGGGCAGACACCGTCCGAGATC GTCGCTCCCGCCACGCCCAGGCGCGATAGGCGGCCGGCCCAAGCGTCCAACCGGAAGCCCTCGCCGGAAAAGAGGGTGTA TCGCATGGCGATCAAATGGACGCTGCGCGACGGTACCCAGGTCTGCCGCGACTACTGGGTGGCGGAATGCGATCTACCGA CGGGCGGTGTTCGTCGCAAGCAGTTTGCGGTGTGCGAGCACGGGGATGTGGAGGCGCGGCGGTTGGCCTTTGAGCAACGC CGGGAATGGCTCGCGCATCCTCCTGCAGCGGCGCCCCGCCGTGCGCGGCGGTCGAGCGCGGGCAGTCCTTCGGGTGATTC CTCGCCGGAGGTCAGCGCCCCGGCACCGGCGATGCCAGCAAGTCCAGCGCGGACATCAGGGCATCTGCCGGCACCGCCCC GCTGA
Upstream 100 bases:
>100_bases GGTCTCAAGAAGATATTGTCAGAGCAGTAACGGTTTCAGAGCGGATGATCCAATCTTCAGGAAGTACTGAGAGCGCCCGT GTGCGCTTCTACTCGTTGTC
Downstream 100 bases:
>100_bases GGTGCATTTCCTTGCCGCTGGTGCGGTCCCGCAGCCGCAGCGTCGGCGTCCCGGTGATGCCGTCGGCAGCCGCCTGCTGT GCTTGACGGCTGACGGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MVDPKPPKIYGLIPRYGQGRLLRWSVSITRGGEHFDKEFRVATYDDPEKAKAAAIAYRDELLKRVPATSRRDFATIVRSN NTSGVPGVVRREENGFARWCAMVSLPNGKTRRRTFAVTKYGEDQARERAIKARLELLTLIDGWFVHHPDAVPEGQTPSEI VAPATPRRDRRPAQASNRKPSPEKRVYRMAIKWTLRDGTQVCRDYWVAECDLPTGGVRRKQFAVCEHGDVEARRLAFEQR REWLAHPPAAAPRRARRSSAGSPSGDSSPEVSAPAPAMPASPARTSGHLPAPPR
Sequences:
>Translated_294_residues MVDPKPPKIYGLIPRYGQGRLLRWSVSITRGGEHFDKEFRVATYDDPEKAKAAAIAYRDELLKRVPATSRRDFATIVRSN NTSGVPGVVRREENGFARWCAMVSLPNGKTRRRTFAVTKYGEDQARERAIKARLELLTLIDGWFVHHPDAVPEGQTPSEI VAPATPRRDRRPAQASNRKPSPEKRVYRMAIKWTLRDGTQVCRDYWVAECDLPTGGVRRKQFAVCEHGDVEARRLAFEQR REWLAHPPAAAPRRARRSSAGSPSGDSSPEVSAPAPAMPASPARTSGHLPAPPR >Mature_294_residues MVDPKPPKIYGLIPRYGQGRLLRWSVSITRGGEHFDKEFRVATYDDPEKAKAAAIAYRDELLKRVPATSRRDFATIVRSN NTSGVPGVVRREENGFARWCAMVSLPNGKTRRRTFAVTKYGEDQARERAIKARLELLTLIDGWFVHHPDAVPEGQTPSEI VAPATPRRDRRPAQASNRKPSPEKRVYRMAIKWTLRDGTQVCRDYWVAECDLPTGGVRRKQFAVCEHGDVEARRLAFEQR REWLAHPPAAAPRRARRSSAGSPSGDSSPEVSAPAPAMPASPARTSGHLPAPPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32889; Mature: 32889
Theoretical pI: Translated: 10.97; Mature: 10.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDPKPPKIYGLIPRYGQGRLLRWSVSITRGGEHFDKEFRVATYDDPEKAKAAAIAYRDE CCCCCCCEEEECCCCCCCCEEEEEEEEEECCCHHHCCCCEEEECCCHHHHHHHHHHHHHH LLKRVPATSRRDFATIVRSNNTSGVPGVVRREENGFARWCAMVSLPNGKTRRRTFAVTKY HHHHCCCCCCCHHHHEEECCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCEEEEEEEC GEDQARERAIKARLELLTLIDGWFVHHPDAVPEGQTPSEIVAPATPRRDRRPAQASNRKP CHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC SPEKRVYRMAIKWTLRDGTQVCRDYWVAECDLPTGGVRRKQFAVCEHGDVEARRLAFEQR CHHHHHEEEEEEEEECCHHHHHHHHHEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHH REWLAHPPAAAPRRARRSSAGSPSGDSSPEVSAPAPAMPASPARTSGHLPAPPR HHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVDPKPPKIYGLIPRYGQGRLLRWSVSITRGGEHFDKEFRVATYDDPEKAKAAAIAYRDE CCCCCCCEEEECCCCCCCCEEEEEEEEEECCCHHHCCCCEEEECCCHHHHHHHHHHHHHH LLKRVPATSRRDFATIVRSNNTSGVPGVVRREENGFARWCAMVSLPNGKTRRRTFAVTKY HHHHCCCCCCCHHHHEEECCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCEEEEEEEC GEDQARERAIKARLELLTLIDGWFVHHPDAVPEGQTPSEIVAPATPRRDRRPAQASNRKP CHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC SPEKRVYRMAIKWTLRDGTQVCRDYWVAECDLPTGGVRRKQFAVCEHGDVEARRLAFEQR CHHHHHEEEEEEEEECCHHHHHHHHHEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHH REWLAHPPAAAPRRARRSSAGSPSGDSSPEVSAPAPAMPASPARTSGHLPAPPR HHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA