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The map label for this gene is atpF

Identifier: 120609071

GI number: 120609071

Start: 393952

End: 394422

Strand: Direct

Name: atpF

Synonym: Aave_0368

Alternate gene names: 120609071

Gene position: 393952-394422 (Clockwise)

Preceding gene: 120609070

Following gene: 120609072

Centisome position: 7.36

GC content: 66.45

Gene sequence:

>471_bases
GTGAGTATCAACGCGACCCTGTTCGTTCAGGCCATCGTCTTCCTGATCCTGGTGCTGTTCACGATGAAGTTCGTGTGGCC
CCCGATCGCGAAGGCGCTGGACGAGCGAGCCCAGAAAATCGCCGAAGGCCTCGCTGCTGCCGACCGCGCCAAGTCCGAAC
TCGTCGCCGTGAACCAGCGCGTCGAGACGGAACTCGCGCAGACGCGCAACGAGACGGCATCGCGTCTTGCGGACGCCGAG
CGCCGTGCCCAGGCCATCATCGAAGAGGCCAAGGCCCGTGCGACCGAGGAAGGCAACAAGATCGTCGCCGCTGCCCGCGC
CGAGGCCGAGCAGCAGACGATCCAGGCCCGCGAAGCCCTGCGCGAGCAGGTGGCCGCGCTGGCCGTCAAGGGTGCCGAGC
AGATCCTCCGCAAGGAGGTCAATGCCGGCGTCCACGCCGATCTGCTGAACCGGCTCAAGACCGAGCTGTAA

Upstream 100 bases:

>100_bases
GCCTTCCTGATCGGCGTTGCCATCGCCCTGCTGTTCGCTTTCGCCAACCCCTTCGTCCTGGCCTGATCCCCGTCCAACGC
CCAACTAGAAAGGTGTTGCC

Downstream 100 bases:

>100_bases
GTAAGGGACGCAACCATGGCAGAACTCGCCACCATTGCCCGCCCTTACGCGGAAGCCCTGTTCAAGGCCTGCGCAGCCCA
GCCGGGCGCCGACCTGGGCA

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MSINATLFVQAIVFLILVLFTMKFVWPPIAKALDERAQKIAEGLAAADRAKSELVAVNQRVETELAQTRNETASRLADAE
RRAQAIIEEAKARATEEGNKIVAAARAEAEQQTIQAREALREQVAALAVKGAEQILRKEVNAGVHADLLNRLKTEL

Sequences:

>Translated_156_residues
MSINATLFVQAIVFLILVLFTMKFVWPPIAKALDERAQKIAEGLAAADRAKSELVAVNQRVETELAQTRNETASRLADAE
RRAQAIIEEAKARATEEGNKIVAAARAEAEQQTIQAREALREQVAALAVKGAEQILRKEVNAGVHADLLNRLKTEL
>Mature_155_residues
SINATLFVQAIVFLILVLFTMKFVWPPIAKALDERAQKIAEGLAAADRAKSELVAVNQRVETELAQTRNETASRLADAER
RAQAIIEEAKARATEEGNKIVAAARAEAEQQTIQAREALREQVAALAVKGAEQILRKEVNAGVHADLLNRLKTEL

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

Organism=Escherichia coli, GI1790174, Length=156, Percent_Identity=42.9487179487179, Blast_Score=122, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_ACIAC (A1TJ37)

Other databases:

- EMBL:   CP000512
- RefSeq:   YP_968749.1
- ProteinModelPortal:   A1TJ37
- STRING:   A1TJ37
- GeneID:   4665357
- GenomeReviews:   CP000512_GR
- KEGG:   aav:Aave_0368
- NMPDR:   fig|397945.5.peg.331
- eggNOG:   COG0711
- HOGENOM:   HBG617328
- OMA:   NPGLIFW
- PhylomeDB:   A1TJ37
- ProtClustDB:   PRK05759
- BioCyc:   AAVE397945:AAVE_0368-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 17097; Mature: 16966

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1009a4e4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINATLFVQAIVFLILVLFTMKFVWPPIAKALDERAQKIAEGLAAADRAKSELVAVNQR
CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VETELAQTRNETASRLADAERRAQAIIEEAKARATEEGNKIVAAARAEAEQQTIQAREAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
REQVAALAVKGAEQILRKEVNAGVHADLLNRLKTEL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCH
>Mature Secondary Structure 
SINATLFVQAIVFLILVLFTMKFVWPPIAKALDERAQKIAEGLAAADRAKSELVAVNQR
CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VETELAQTRNETASRLADAERRAQAIIEEAKARATEEGNKIVAAARAEAEQQTIQAREAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
REQVAALAVKGAEQILRKEVNAGVHADLLNRLKTEL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA