Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609051
Identifier: 120609051
GI number: 120609051
Start: 375491
End: 375997
Strand: Direct
Name: 120609051
Synonym: Aave_0348
Alternate gene names: NA
Gene position: 375491-375997 (Clockwise)
Preceding gene: 120609050
Following gene: 120609054
Centisome position: 7.01
GC content: 67.65
Gene sequence:
>507_bases ATGATCAAGATCGGAGAAGCGCTGCCCGCCGTGACGCTGATGGAATACTCGGAAGTCGAGGGCGGAGGCTGCAGCATCGG CCCCAACCCCGTGGACGTCGCCAAGGCCTCGGCCGGCAAGACGATCGCGCTGTTCGCCGTGCCGGGCGCTTTCACGCCCA CCTGCTCCGCCAAGCACGTGCCGGGCTATGTCGAGCAGGCCGAGGCCTTCAAGGCGGCGGGCGTGGACGAAATCTGGTGC CTGAGCGTCAACGATGCCTTCGTCATGGGCGCCTGGGCGCGTGACCAGAAGACCGACGGCAAGGTGCGCATGCTGGCCGA TGGCGATGCCGCCTTCGCGAAGGCCACCGGCCTGACGCTGGACCTCAACGGCAAGGGCCTGGGCCTGCGCAGCAACCGCT ATTCCATGCTGGTCAAGGACGGCAAGGTGGCTTCGCTGAACATCGAGGCGCCCGGCAAGTTCGAGGTGAGCGACGCCGAC ACGCTGCTGGCCCAGGCCCGCGGCTGA
Upstream 100 bases:
>100_bases GCCCACAATCGTGGGCCGTTTTTTTATTTCCGGCGCCGATGCCCGCGTCCGCGGCGCGCCGGCTGGCCCATCCACCACCT ACCCAACTGGAGAAGAAAGC
Downstream 100 bases:
>100_bases GAACAGCTCACACACCCCTCGGCAGAACCGCTTCGCCGGATCGCGTGAACCGCTCCAGGCGCTGTCCGGGGGCCACTCTC AGTCGATATCGACCTTGAGA
Product: redoxin domain-containing protein
Products: NA
Alternate protein names: Thioredoxin reductase [H]
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MIKIGEALPAVTLMEYSEVEGGGCSIGPNPVDVAKASAGKTIALFAVPGAFTPTCSAKHVPGYVEQAEAFKAAGVDEIWC LSVNDAFVMGAWARDQKTDGKVRMLADGDAAFAKATGLTLDLNGKGLGLRSNRYSMLVKDGKVASLNIEAPGKFEVSDAD TLLAQARG
Sequences:
>Translated_168_residues MIKIGEALPAVTLMEYSEVEGGGCSIGPNPVDVAKASAGKTIALFAVPGAFTPTCSAKHVPGYVEQAEAFKAAGVDEIWC LSVNDAFVMGAWARDQKTDGKVRMLADGDAAFAKATGLTLDLNGKGLGLRSNRYSMLVKDGKVASLNIEAPGKFEVSDAD TLLAQARG >Mature_168_residues MIKIGEALPAVTLMEYSEVEGGGCSIGPNPVDVAKASAGKTIALFAVPGAFTPTCSAKHVPGYVEQAEAFKAAGVDEIWC LSVNDAFVMGAWARDQKTDGKVRMLADGDAAFAKATGLTLDLNGKGLGLRSNRYSMLVKDGKVASLNIEAPGKFEVSDAD TLLAQARG
Specific function: Unknown
COG id: COG0678
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI6912238, Length=167, Percent_Identity=49.1017964071856, Blast_Score=137, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6323138, Length=155, Percent_Identity=30.9677419354839, Blast_Score=66, Evalue=3e-12, Organism=Drosophila melanogaster, GI78706776, Length=153, Percent_Identity=47.0588235294118, Blast_Score=138, Evalue=1e-33, Organism=Drosophila melanogaster, GI78709078, Length=153, Percent_Identity=47.0588235294118, Blast_Score=138, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013740 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF08534 Redoxin [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17423; Mature: 17423
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKIGEALPAVTLMEYSEVEGGGCSIGPNPVDVAKASAGKTIALFAVPGAFTPTCSAKHV CEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCC PGYVEQAEAFKAAGVDEIWCLSVNDAFVMGAWARDQKTDGKVRMLADGDAAFAKATGLTL CCHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCCCCCEEEEECCCCCEEEECCCEE DLNGKGLGLRSNRYSMLVKDGKVASLNIEAPGKFEVSDADTLLAQARG EECCCCCEEECCCEEEEEECCCEEEEEECCCCCEEECCHHHHHEECCC >Mature Secondary Structure MIKIGEALPAVTLMEYSEVEGGGCSIGPNPVDVAKASAGKTIALFAVPGAFTPTCSAKHV CEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCC PGYVEQAEAFKAAGVDEIWCLSVNDAFVMGAWARDQKTDGKVRMLADGDAAFAKATGLTL CCHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCCCCCEEEEECCCCCEEEECCCEE DLNGKGLGLRSNRYSMLVKDGKVASLNIEAPGKFEVSDADTLLAQARG EECCCCCEEECCCEEEEEECCCEEEEEECCCCCEEECCHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]