| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609034
Identifier: 120609034
GI number: 120609034
Start: 363181
End: 363822
Strand: Direct
Name: 120609034
Synonym: Aave_0331
Alternate gene names: NA
Gene position: 363181-363822 (Clockwise)
Preceding gene: 120609033
Following gene: 120609035
Centisome position: 6.78
GC content: 72.27
Gene sequence:
>642_bases GTGAACGCCCAGACTGAACGCCTGACCTTCTCCGGCGCGGCCGGTGCCATCGAGGCGCTGCGCGACCCGGCCGCCGCGGC CGCGGGCGACGCCCCGCGCGGCGTGGCCGTGATCGCCCATCCCCATCCGCTCTTCGGCGGCACCATGGACAACAAGGTCG TGCAGACCCTCGCCCGGGCCTTCGTCGCCTGTGGATGGACGGCCGTGCGCTTCAATTTCCGGGGCGTCGGCGGCAGTGCC GGCGCCCACGACGAAGGGCGCGGAGAGCTGGACGACCTGCTCGCGGTCATCGACCAGGCGGCGCCCGCCGGTGCGATCGC GCTGGCCGGGTTTTCCTTCGGTGCCTTCGTCACCAGCCACGCCCTGGAGCGGCTCTGGGGCGCGCGCGACATAGAACGCG CCGTGCTCGTGGGGACGGCCGCCAGCCGCTTCACCGTCGCGCCCGTGCCGGCCGAGGCCCATGGCCGCACGCTGGTCGTC CACGGCGAGCAGGACGACACCGTGCCCCTGGCTGCCGTGATGGACTGGGCGCGCCCGCAGACACTCCCTGTGACAGTCGT GCCCGGTGGCGGGCATTTCTTTCACGGACAATTGCCGCTGCTCAAGAGCCTGGTCATGCGGCACCTGACTTCCCAGGCCT GA
Upstream 100 bases:
>100_bases TCGGACGCTGATCCGGGCTCAGACCCCGGCCTTCCCGCATTTCGGTCCGCGGGCCGCCTTCTCTGGGGCGGCGCGTGTGG CCAATTCATACTGCAGACAA
Downstream 100 bases:
>100_bases GGGGCAGGCCGCCGGCTGCCTGCCGCCCGCCTCCTCTTTCTTTCTATCCCCCAGTTCCCCTTCTTCCCGGACCGTTCCGA ATGCATGCCTCCCTGAAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MNAQTERLTFSGAAGAIEALRDPAAAAAGDAPRGVAVIAHPHPLFGGTMDNKVVQTLARAFVACGWTAVRFNFRGVGGSA GAHDEGRGELDDLLAVIDQAAPAGAIALAGFSFGAFVTSHALERLWGARDIERAVLVGTAASRFTVAPVPAEAHGRTLVV HGEQDDTVPLAAVMDWARPQTLPVTVVPGGGHFFHGQLPLLKSLVMRHLTSQA
Sequences:
>Translated_213_residues MNAQTERLTFSGAAGAIEALRDPAAAAAGDAPRGVAVIAHPHPLFGGTMDNKVVQTLARAFVACGWTAVRFNFRGVGGSA GAHDEGRGELDDLLAVIDQAAPAGAIALAGFSFGAFVTSHALERLWGARDIERAVLVGTAASRFTVAPVPAEAHGRTLVV HGEQDDTVPLAAVMDWARPQTLPVTVVPGGGHFFHGQLPLLKSLVMRHLTSQA >Mature_213_residues MNAQTERLTFSGAAGAIEALRDPAAAAAGDAPRGVAVIAHPHPLFGGTMDNKVVQTLARAFVACGWTAVRFNFRGVGGSA GAHDEGRGELDDLLAVIDQAAPAGAIALAGFSFGAFVTSHALERLWGARDIERAVLVGTAASRFTVAPVPAEAHGRTLVV HGEQDDTVPLAAVMDWARPQTLPVTVVPGGGHFFHGQLPLLKSLVMRHLTSQA
Specific function: Unknown
COG id: COG2945
COG function: function code R; Predicted hydrolase of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15 [H]
EC number: NA
Molecular weight: Translated: 22067; Mature: 22067
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAQTERLTFSGAAGAIEALRDPAAAAAGDAPRGVAVIAHPHPLFGGTMDNKVVQTLARA CCCCCCEEEECCCHHHHHHHHCCHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHH FVACGWTAVRFNFRGVGGSAGAHDEGRGELDDLLAVIDQAAPAGAIALAGFSFGAFVTSH HHHCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH ALERLWGARDIERAVLVGTAASRFTVAPVPAEAHGRTLVVHGEQDDTVPLAAVMDWARPQ HHHHHHCCCHHHHEEEEECCCCCEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCC TLPVTVVPGGGHFFHGQLPLLKSLVMRHLTSQA CEEEEEECCCCCEECCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MNAQTERLTFSGAAGAIEALRDPAAAAAGDAPRGVAVIAHPHPLFGGTMDNKVVQTLARA CCCCCCEEEECCCHHHHHHHHCCHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHH FVACGWTAVRFNFRGVGGSAGAHDEGRGELDDLLAVIDQAAPAGAIALAGFSFGAFVTSH HHHCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH ALERLWGARDIERAVLVGTAASRFTVAPVPAEAHGRTLVVHGEQDDTVPLAAVMDWARPQ HHHHHHCCCHHHHEEEEECCCCCEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCC TLPVTVVPGGGHFFHGQLPLLKSLVMRHLTSQA CEEEEEECCCCCEECCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]