The gene/protein map for NC_008752 is currently unavailable.
Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is ywfM [H]

Identifier: 120608982

GI number: 120608982

Start: 310569

End: 311534

Strand: Direct

Name: ywfM [H]

Synonym: Aave_0279

Alternate gene names: 120608982

Gene position: 310569-311534 (Clockwise)

Preceding gene: 120608981

Following gene: 120608983

Centisome position: 5.8

GC content: 75.36

Gene sequence:

>966_bases
ATGTCCTCCCCATCGCAAGCAGCCTCTCCCGACACGCCGTCTTCCGCCACCATCCGGCTGGCGGCACAGCCCGCCTCCCG
GGCGCCGCTGGGCATCGGCATGGTGCTGCTGGCCGCCGTGTTGTGGGGCACGACGGGCACGGCGCAGAGCCTCGCGCCTT
CCGGCCTGGCGCCGGTGTGGGTGGGGGCGCTGCGGCTGCTGATCGCCGGTGCTTTCTTCGCGGCGCTGCTGCGGTGGCAG
GGCGGTGCGCGCGGCCTCGGCGCGCTGCCCTGGCGCGGCGTCCTGGCCGGCGGGGTCTGCGTGGCCGCCTACAACCTGAG
TTTTTTCGCCGGGGTGAAGGCCAGCGGCGTGGCGCTGGGCACGGCGATCGCGATCGGCAGCGGCCCGATCTGGGCCGGGC
TGCTGCAGACCGTGGTGCAGCGCCGCTGGCCCGCGGCCGTGTGGTGGGCGGGCACGCTGCTCGGCGTGGCGGGCGGGGCC
GCCATGGCGCTGGACGGCCGCACCAGCGTGCAGGCGCCGCCGGGCGGCATCGCGCTGTGCCTGGTGGCGGGCCTGTCGTA
CGCTGCCTATGCGCTCGTCAACCAGCGGCTGGTGGCCCGCGCAGCGCCGGGGGCCGTCAACCTGGCGGTGTTCGGCTCGG
CCGCGCTGTTGTCCCTGCCGGCCGCCTTCGCCATCGCCGGGCCGCTCGCGGTGTCGGCGCGCGCCTGGGGGGTCGTGCTG
TACCTGGGTCTGGTGGCCACCGGAGTGGCATACCTGCTTTTCACGCATGCGCTGAGGCACATCAGCGGCGCCACGGGCGT
CACCCTCGCGCTGGCCGAACCGGTCGTCGCGTTCTGCCTGGCCGTGGCGGTGGTAGGGGAATCGCCGTCCGCCATGGCCG
TTTGGGGGCTGGCGGGCGTGATCGGCGGGCTGCTGATCGTGGTCTGGTCGGAGATCCGCGGCCGCAGGGGGGCAGCGGCC
GGGTGA

Upstream 100 bases:

>100_bases
GTGCCCGCGCGTTGCGCGGAGACGCCGGCAGGGACTGAACCGGCGCACTTCGAGCGTTGCGCGACACATGGCGGCCGCGC
CGCGTGGCACGCTCGGGGCC

Downstream 100 bases:

>100_bases
CGGGTGCCGTTTCGGCTGCATGGACATTTGCGCGGGCGGCCTACAGCCGCGCTGCGCTCCGGCGCAATAGACTCGCCCCA
TCATGCCGAACGATCACCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MSSPSQAASPDTPSSATIRLAAQPASRAPLGIGMVLLAAVLWGTTGTAQSLAPSGLAPVWVGALRLLIAGAFFAALLRWQ
GGARGLGALPWRGVLAGGVCVAAYNLSFFAGVKASGVALGTAIAIGSGPIWAGLLQTVVQRRWPAAVWWAGTLLGVAGGA
AMALDGRTSVQAPPGGIALCLVAGLSYAAYALVNQRLVARAAPGAVNLAVFGSAALLSLPAAFAIAGPLAVSARAWGVVL
YLGLVATGVAYLLFTHALRHISGATGVTLALAEPVVAFCLAVAVVGESPSAMAVWGLAGVIGGLLIVVWSEIRGRRGAAA
G

Sequences:

>Translated_321_residues
MSSPSQAASPDTPSSATIRLAAQPASRAPLGIGMVLLAAVLWGTTGTAQSLAPSGLAPVWVGALRLLIAGAFFAALLRWQ
GGARGLGALPWRGVLAGGVCVAAYNLSFFAGVKASGVALGTAIAIGSGPIWAGLLQTVVQRRWPAAVWWAGTLLGVAGGA
AMALDGRTSVQAPPGGIALCLVAGLSYAAYALVNQRLVARAAPGAVNLAVFGSAALLSLPAAFAIAGPLAVSARAWGVVL
YLGLVATGVAYLLFTHALRHISGATGVTLALAEPVVAFCLAVAVVGESPSAMAVWGLAGVIGGLLIVVWSEIRGRRGAAA
G
>Mature_320_residues
SSPSQAASPDTPSSATIRLAAQPASRAPLGIGMVLLAAVLWGTTGTAQSLAPSGLAPVWVGALRLLIAGAFFAALLRWQG
GARGLGALPWRGVLAGGVCVAAYNLSFFAGVKASGVALGTAIAIGSGPIWAGLLQTVVQRRWPAAVWWAGTLLGVAGGAA
MALDGRTSVQAPPGGIALCLVAGLSYAAYALVNQRLVARAAPGAVNLAVFGSAALLSLPAAFAIAGPLAVSARAWGVVLY
LGLVATGVAYLLFTHALRHISGATGVTLALAEPVVAFCLAVAVVGESPSAMAVWGLAGVIGGLLIVVWSEIRGRRGAAAG

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31768; Mature: 31636

Theoretical pI: Translated: 11.71; Mature: 11.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPSQAASPDTPSSATIRLAAQPASRAPLGIGMVLLAAVLWGTTGTAQSLAPSGLAPVW
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCHHHH
VGALRLLIAGAFFAALLRWQGGARGLGALPWRGVLAGGVCVAAYNLSFFAGVKASGVALG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCEEEH
TAIAIGSGPIWAGLLQTVVQRRWPAAVWWAGTLLGVAGGAAMALDGRTSVQAPPGGIALC
HEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHH
LVAGLSYAAYALVNQRLVARAAPGAVNLAVFGSAALLSLPAAFAIAGPLAVSARAWGVVL
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLGLVATGVAYLLFTHALRHISGATGVTLALAEPVVAFCLAVAVVGESPSAMAVWGLAGV
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IGGLLIVVWSEIRGRRGAAAG
HHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SSPSQAASPDTPSSATIRLAAQPASRAPLGIGMVLLAAVLWGTTGTAQSLAPSGLAPVW
CCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCHHHH
VGALRLLIAGAFFAALLRWQGGARGLGALPWRGVLAGGVCVAAYNLSFFAGVKASGVALG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCEEEH
TAIAIGSGPIWAGLLQTVVQRRWPAAVWWAGTLLGVAGGAAMALDGRTSVQAPPGGIALC
HEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHH
LVAGLSYAAYALVNQRLVARAAPGAVNLAVFGSAALLSLPAAFAIAGPLAVSARAWGVVL
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLGLVATGVAYLLFTHALRHISGATGVTLALAEPVVAFCLAVAVVGESPSAMAVWGLAGV
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IGGLLIVVWSEIRGRRGAAAG
HHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]