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The map label for this gene is 120608981

Identifier: 120608981

GI number: 120608981

Start: 309745

End: 310506

Strand: Direct

Name: 120608981

Synonym: Aave_0278

Alternate gene names: NA

Gene position: 309745-310506 (Clockwise)

Preceding gene: 120608980

Following gene: 120608982

Centisome position: 5.79

GC content: 77.43

Gene sequence:

>762_bases
ATGTATTCCGGCGCCACGCTGTCCTGCACCCTCCGCCACTACGGCGGGGAGCACGCCGCGCATGCGCACGACCATGCGCA
GGTGCTGGTCGGGCTGCAGGGGCGCATGGAGCTGGAGGTGGACGGCCGTTCGGCGTTCGTGGACGCCTCCTGCGGCATCC
TGATACCCGCGGGCGCGCGGCACGGCTACCTGGCCTCGCCCGGAGCCCGCTTCTGCGTGGTCGATGCGGCGGCGCAACCG
GGCATGGACCGGCTGCGCCGCTTCGCCGTGCCGGCCCAGGCGCGCGACGGCCTGGCGCGGGCCATCGGCGGAGGGGCCGG
CGGTGCGCCCTGCCTGCCCTCGCTGCCCGGCGTGTGGAGCGCGCCCGTCGCGCAGGGGGGCCAGGTGGCCGCCCATCTGG
AAGCCCTGCTGGGCCGTGCGCCCCGCGTGCTGGCCCGCCGGGCACTGCCGCTGGAACGGCTGCAGCAGGCGGTGGAGGCC
GCCCTGCACGAGCCCTGGCCCACGCCCCGCATGGCCGCCCTGTGCCACCTGAGCCCGCAGCGCTTCCATGCCCGCTGGCT
GGAACTCATCGGCGCGACGCCCCAGGCCTGGCTGCGCGGGCTGCGCCTGGATGCCGCCGCGCAGCGCATCGCGCGCGGAC
AGCGGCTCGACGATGCGGCGCTGGCCTGCGGCTACGCCACGGGTACCGCCCTCGCGAGCGCGCTGCGCCGGGAGCGCGGC
ACGGGTGCCCGCGCGTTGCGCGGAGACGCCGGCAGGGACTGA

Upstream 100 bases:

>100_bases
AACTCGCCAAGGCCGGGCTGCCGGGCAGGCCTGCCTGATTGCGCTCCGGGCAATCGCTGCATGCGTGGCGCCCGGGTTTC
GGGAGCGGTAGGATCTTTCC

Downstream 100 bases:

>100_bases
ACCGGCGCACTTCGAGCGTTGCGCGACACATGGCGGCCGCGCCGCGTGGCACGCTCGGGGCCATGTCCTCCCCATCGCAA
GCAGCCTCTCCCGACACGCC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator Arac Family; Transcriptional Regulator AraC Family

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MYSGATLSCTLRHYGGEHAAHAHDHAQVLVGLQGRMELEVDGRSAFVDASCGILIPAGARHGYLASPGARFCVVDAAAQP
GMDRLRRFAVPAQARDGLARAIGGGAGGAPCLPSLPGVWSAPVAQGGQVAAHLEALLGRAPRVLARRALPLERLQQAVEA
ALHEPWPTPRMAALCHLSPQRFHARWLELIGATPQAWLRGLRLDAAAQRIARGQRLDDAALACGYATGTALASALRRERG
TGARALRGDAGRD

Sequences:

>Translated_253_residues
MYSGATLSCTLRHYGGEHAAHAHDHAQVLVGLQGRMELEVDGRSAFVDASCGILIPAGARHGYLASPGARFCVVDAAAQP
GMDRLRRFAVPAQARDGLARAIGGGAGGAPCLPSLPGVWSAPVAQGGQVAAHLEALLGRAPRVLARRALPLERLQQAVEA
ALHEPWPTPRMAALCHLSPQRFHARWLELIGATPQAWLRGLRLDAAAQRIARGQRLDDAALACGYATGTALASALRRERG
TGARALRGDAGRD
>Mature_253_residues
MYSGATLSCTLRHYGGEHAAHAHDHAQVLVGLQGRMELEVDGRSAFVDASCGILIPAGARHGYLASPGARFCVVDAAAQP
GMDRLRRFAVPAQARDGLARAIGGGAGGAPCLPSLPGVWSAPVAQGGQVAAHLEALLGRAPRVLARRALPLERLQQAVEA
ALHEPWPTPRMAALCHLSPQRFHARWLELIGATPQAWLRGLRLDAAAQRIARGQRLDDAALACGYATGTALASALRRERG
TGARALRGDAGRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26563; Mature: 26563

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSGATLSCTLRHYGGEHAAHAHDHAQVLVGLQGRMELEVDGRSAFVDASCGILIPAGAR
CCCCCEEEEEHHHCCCCCCCCHHHHHHEEEECCCCEEEEECCCEEEEECCCCEEEECCCC
HGYLASPGARFCVVDAAAQPGMDRLRRFAVPAQARDGLARAIGGGAGGAPCLPSLPGVWS
CCCCCCCCCCEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
APVAQGGQVAAHLEALLGRAPRVLARRALPLERLQQAVEAALHEPWPTPRMAALCHLSPQ
CCCCCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHH
RFHARWLELIGATPQAWLRGLRLDAAAQRIARGQRLDDAALACGYATGTALASALRRERG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHCC
TGARALRGDAGRD
CCCHHHCCCCCCC
>Mature Secondary Structure
MYSGATLSCTLRHYGGEHAAHAHDHAQVLVGLQGRMELEVDGRSAFVDASCGILIPAGAR
CCCCCEEEEEHHHCCCCCCCCHHHHHHEEEECCCCEEEEECCCEEEEECCCCEEEECCCC
HGYLASPGARFCVVDAAAQPGMDRLRRFAVPAQARDGLARAIGGGAGGAPCLPSLPGVWS
CCCCCCCCCCEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
APVAQGGQVAAHLEALLGRAPRVLARRALPLERLQQAVEAALHEPWPTPRMAALCHLSPQ
CCCCCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHH
RFHARWLELIGATPQAWLRGLRLDAAAQRIARGQRLDDAALACGYATGTALASALRRERG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHCC
TGARALRGDAGRD
CCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA