| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608980
Identifier: 120608980
GI number: 120608980
Start: 308126
End: 309682
Strand: Direct
Name: 120608980
Synonym: Aave_0277
Alternate gene names: NA
Gene position: 308126-309682 (Clockwise)
Preceding gene: 120608976
Following gene: 120608981
Centisome position: 5.76
GC content: 63.65
Gene sequence:
>1557_bases ATGAGAAAAGAACTAGCCAGCTGTGCCGTGCGCACTGCGGTGCCCTCCGTGGTACTCCCGCCGAAGGTCAGCCCGCACCG GGCTCCGGTAGCTGCAAGCCCCGACACCACACAGCGCATTGCCCCGCGCGGAACGCGGTCCATGACTTCCGCTCCCAGGC GTGGCGGCATCCCAGAAACCGCCTTTCCGACGGGTGGTGGCCAGGACGGAACGCAGAACCTCCCGGCCCGGGCGATGAAA TATGTTCTCGGGCTGGCCGCTGCAGGATACCTCTGCGACAAGGCCGCCAACGGCTTCTTCCTGTCCACCACATCCCTGCA CGATGGCAGGGGCGGCTTCACCAGCAATGCGCGGCTCGACAAGGCCTTCACGGAGGCCGCCGCTTATCGCCAGCGCTTTC ATGCAGCCGAGCCCGGAGAGCGTGCACTGCAGCCGCGGTTGCCGGCTTTCCTGAAACGGTGCGGAAACCGGCAATTCGTT TCCATGACCGACTACCGGGCCGCCACCAAGGTGCACCTCATCGAACGCACGGACACTCCCGAGGCCCGGGCTTCCCTGCT CAAGAGCCTCGAATGCCTGCAGGGCACACTGGTGAAGCAGGAGTGCGTCGATCGCTATGCGCCTTCCAGCGTTCCGGCGG ATTTTGATCTGCGCAACAGCGCGCTGTATGGGCAGAAGAGCAAATATGCCCTCGCGGGAGTGTCCAATACGGAAACCGGC GCCAGGGGCTATACGTCGCGCTCGATCACCCGGCCATTCGTGAACCGCGGCCTGAGGCACTTCAAGGAAGATTCCGAGCG CCGGGGGCTGTCCCTGCGCAAAAGCTCGGAATCGCTACAGGCGCAACTCGCCAAGGAAGGGGCGCTCAGTGGGACCGCCC AGTTCGCGGCGGGGCAGACCTTGCTGAATTTCAGGCAGGTCTATGCTTCCGACGAGCACTGGGGCCACGCCGAGAACGTC ATCATGAAGTTCCTGGTGGAACAGGGTCTTCTGTCGCAGCGCCAGACGGAGCGCATCGACGAAAGCCTCATGTTCGAGGA CCCGTCCAAAAGCGTCTTCAAGCGGAACACGGGAGTTGCCGGTCCACTGCTGCACCGGCTCGAAACGCGATTCAAGGAAT TCCTGCTGCGCGATGACCCGGAAGGCCTGGAAGACATCCGGCCCATGGCGCTCTCGAAGAACATGGAAAACCTGGCCATC GCCCACTTCAAGCTGAACGAGCGCGGAGACGGTTTCGAGGACTGTTCGGGCCTGGGGGATTCGTTCACTGCCGCCAACGC CGTCGCCTGCATCAACCATGCGAGACTCATGAGCGGGGAGCCTCGCCTGTCGATGCAGGATGTGGAGGTGCTCATCGCCT GTCTGAACGCCGTGTACGACGATGCGAGCGGCAGCCGCCACACGCTCCAGGAGATCGCCCGCGGGTGTTTTGCCGGCGCC GGGTACACGATCGAGGATGCAGACGCATTTTTCGAGGGCATTTGCCGCGAAGCAGCGCAAGAGTTCTACACTGGCAAGCA ACTCGCCAAGGCCGGGCTGCCGGGCAGGCCTGCCTGA
Upstream 100 bases:
>100_bases GATGCTGTTGACTCAGAATCGCGCCAACTGAACTGGCGCGCAACTTCATTTGTCCATTCCGGGCGCCTGCGAGGCCGCGC CGCAAACAACCAATACACAC
Downstream 100 bases:
>100_bases TTGCGCTCCGGGCAATCGCTGCATGCGTGGCGCCCGGGTTTCGGGAGCGGTAGGATCTTTCCATGTATTCCGGCGCCACG CTGTCCTGCACCCTCCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MRKELASCAVRTAVPSVVLPPKVSPHRAPVAASPDTTQRIAPRGTRSMTSAPRRGGIPETAFPTGGGQDGTQNLPARAMK YVLGLAAAGYLCDKAANGFFLSTTSLHDGRGGFTSNARLDKAFTEAAAYRQRFHAAEPGERALQPRLPAFLKRCGNRQFV SMTDYRAATKVHLIERTDTPEARASLLKSLECLQGTLVKQECVDRYAPSSVPADFDLRNSALYGQKSKYALAGVSNTETG ARGYTSRSITRPFVNRGLRHFKEDSERRGLSLRKSSESLQAQLAKEGALSGTAQFAAGQTLLNFRQVYASDEHWGHAENV IMKFLVEQGLLSQRQTERIDESLMFEDPSKSVFKRNTGVAGPLLHRLETRFKEFLLRDDPEGLEDIRPMALSKNMENLAI AHFKLNERGDGFEDCSGLGDSFTAANAVACINHARLMSGEPRLSMQDVEVLIACLNAVYDDASGSRHTLQEIARGCFAGA GYTIEDADAFFEGICREAAQEFYTGKQLAKAGLPGRPA
Sequences:
>Translated_518_residues MRKELASCAVRTAVPSVVLPPKVSPHRAPVAASPDTTQRIAPRGTRSMTSAPRRGGIPETAFPTGGGQDGTQNLPARAMK YVLGLAAAGYLCDKAANGFFLSTTSLHDGRGGFTSNARLDKAFTEAAAYRQRFHAAEPGERALQPRLPAFLKRCGNRQFV SMTDYRAATKVHLIERTDTPEARASLLKSLECLQGTLVKQECVDRYAPSSVPADFDLRNSALYGQKSKYALAGVSNTETG ARGYTSRSITRPFVNRGLRHFKEDSERRGLSLRKSSESLQAQLAKEGALSGTAQFAAGQTLLNFRQVYASDEHWGHAENV IMKFLVEQGLLSQRQTERIDESLMFEDPSKSVFKRNTGVAGPLLHRLETRFKEFLLRDDPEGLEDIRPMALSKNMENLAI AHFKLNERGDGFEDCSGLGDSFTAANAVACINHARLMSGEPRLSMQDVEVLIACLNAVYDDASGSRHTLQEIARGCFAGA GYTIEDADAFFEGICREAAQEFYTGKQLAKAGLPGRPA >Mature_518_residues MRKELASCAVRTAVPSVVLPPKVSPHRAPVAASPDTTQRIAPRGTRSMTSAPRRGGIPETAFPTGGGQDGTQNLPARAMK YVLGLAAAGYLCDKAANGFFLSTTSLHDGRGGFTSNARLDKAFTEAAAYRQRFHAAEPGERALQPRLPAFLKRCGNRQFV SMTDYRAATKVHLIERTDTPEARASLLKSLECLQGTLVKQECVDRYAPSSVPADFDLRNSALYGQKSKYALAGVSNTETG ARGYTSRSITRPFVNRGLRHFKEDSERRGLSLRKSSESLQAQLAKEGALSGTAQFAAGQTLLNFRQVYASDEHWGHAENV IMKFLVEQGLLSQRQTERIDESLMFEDPSKSVFKRNTGVAGPLLHRLETRFKEFLLRDDPEGLEDIRPMALSKNMENLAI AHFKLNERGDGFEDCSGLGDSFTAANAVACINHARLMSGEPRLSMQDVEVLIACLNAVYDDASGSRHTLQEIARGCFAGA GYTIEDADAFFEGICREAAQEFYTGKQLAKAGLPGRPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56491; Mature: 56491
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKELASCAVRTAVPSVVLPPKVSPHRAPVAASPDTTQRIAPRGTRSMTSAPRRGGIPET CCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHCCCCCCCCCCC AFPTGGGQDGTQNLPARAMKYVLGLAAAGYLCDKAANGFFLSTTSLHDGRGGFTSNARLD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHH KAFTEAAAYRQRFHAAEPGERALQPRLPAFLKRCGNRQFVSMTDYRAATKVHLIERTDTP HHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHCCCCCEEEEHHHHHHHEEEEEECCCCH EARASLLKSLECLQGTLVKQECVDRYAPSSVPADFDLRNSALYGQKSKYALAGVSNTETG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCEEEECCCCCCCC ARGYTSRSITRPFVNRGLRHFKEDSERRGLSLRKSSESLQAQLAKEGALSGTAQFAAGQT CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LLNFRQVYASDEHWGHAENVIMKFLVEQGLLSQRQTERIDESLMFEDPSKSVFKRNTGVA HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCH GPLLHRLETRFKEFLLRDDPEGLEDIRPMALSKNMENLAIAHFKLNERGDGFEDCSGLGD HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHCCCC SFTAANAVACINHARLMSGEPRLSMQDVEVLIACLNAVYDDASGSRHTLQEIARGCFAGA CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC GYTIEDADAFFEGICREAAQEFYTGKQLAKAGLPGRPA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRKELASCAVRTAVPSVVLPPKVSPHRAPVAASPDTTQRIAPRGTRSMTSAPRRGGIPET CCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHCCCCCCCCCCC AFPTGGGQDGTQNLPARAMKYVLGLAAAGYLCDKAANGFFLSTTSLHDGRGGFTSNARLD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHH KAFTEAAAYRQRFHAAEPGERALQPRLPAFLKRCGNRQFVSMTDYRAATKVHLIERTDTP HHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHCCCCCEEEEHHHHHHHEEEEEECCCCH EARASLLKSLECLQGTLVKQECVDRYAPSSVPADFDLRNSALYGQKSKYALAGVSNTETG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCEEEECCCCCCCC ARGYTSRSITRPFVNRGLRHFKEDSERRGLSLRKSSESLQAQLAKEGALSGTAQFAAGQT CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LLNFRQVYASDEHWGHAENVIMKFLVEQGLLSQRQTERIDESLMFEDPSKSVFKRNTGVA HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCH GPLLHRLETRFKEFLLRDDPEGLEDIRPMALSKNMENLAIAHFKLNERGDGFEDCSGLGD HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHCCCC SFTAANAVACINHARLMSGEPRLSMQDVEVLIACLNAVYDDASGSRHTLQEIARGCFAGA CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC GYTIEDADAFFEGICREAAQEFYTGKQLAKAGLPGRPA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA