| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608946
Identifier: 120608946
GI number: 120608946
Start: 273299
End: 274069
Strand: Direct
Name: 120608946
Synonym: Aave_0243
Alternate gene names: NA
Gene position: 273299-274069 (Clockwise)
Preceding gene: 120608945
Following gene: 120608947
Centisome position: 5.11
GC content: 70.43
Gene sequence:
>771_bases ATGCGCCTTCTGAGGCACCTCATGGGGCGGCACCGCACGCCGGCCACCAACCGGCTGCTGGGCCTGCTGCTGGCGTTCAA CGCGGGCGCGGTGAACGCGGGCGGCTTTCTCGTCGTGCACAGCTACACCTCGCACATGACGGGTTTCCTGTCCACCGTGG CCGACAACCTCGTGCTGGGCAACATGGCCCTGGTGCTGGCCGCCGTGGGCACGCTCTGGGCGTTCATGTCGGGCGCGGGC ACCACCGCGATCATGGTGAACTGGGCGCGCCACCACCGGCTGCGCAGCGGGTTCGCGCTGCCGCTGCTGCTGGAAGCCGT GCTGATGCTGCTGTTCGGGCTCATGGGCGCGATCACGCTGGGCTGGCCCACGCCGTTCTCGGTGCCGCTCACGGTGCTGC TGCTGGCCTTCCTCATGGGGCTGCAGAACGCGGTGGTGACCAAGATGTCTTCCGCCCAGATCCGCACCACGCACATGACG GGCGTGGCCACCGACCTGGGCATCGAGATGGGCAAGATGCTCTACTGGAACCGGCGCGGCACCCCGCCCGAGGCGCACGT GCACTCCAACCGCGCCCGGCTGGTGCTGTTCGCGAGCCTGCTGGGCATGTTCACGGCCGGCGGCATCGTGGGCGCGGCCG GCTTCAAGCATGTGGGCTTCGTCTGGGTGGTGCCGCTCGCGGCGGTGCTGCTGGGGCTCGCGCTGCCGCCGCTCGCATCG GATTTCGGGCACCTGGCCGCGCTGTGGCGCACGCGCCGCCACCGCCATTGA
Upstream 100 bases:
>100_bases CGGACGCGGCCCTGCAGCGCATCCATGAACGGTTGCGCGCGGCCTTCGATCCCTCGGGCATCTTCAATCCCGGACGGCGG GTGGCGGGGTAGGGCAGGGC
Downstream 100 bases:
>100_bases GCGCCCTGCGGGCCGACACCACGACATTCCCACGACACGACCACCATGCAAACCCGACTCGCCCCCGAATTCCAGGACAC GCCCGAAGGCCGCGAGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MRLLRHLMGRHRTPATNRLLGLLLAFNAGAVNAGGFLVVHSYTSHMTGFLSTVADNLVLGNMALVLAAVGTLWAFMSGAG TTAIMVNWARHHRLRSGFALPLLLEAVLMLLFGLMGAITLGWPTPFSVPLTVLLLAFLMGLQNAVVTKMSSAQIRTTHMT GVATDLGIEMGKMLYWNRRGTPPEAHVHSNRARLVLFASLLGMFTAGGIVGAAGFKHVGFVWVVPLAAVLLGLALPPLAS DFGHLAALWRTRRHRH
Sequences:
>Translated_256_residues MRLLRHLMGRHRTPATNRLLGLLLAFNAGAVNAGGFLVVHSYTSHMTGFLSTVADNLVLGNMALVLAAVGTLWAFMSGAG TTAIMVNWARHHRLRSGFALPLLLEAVLMLLFGLMGAITLGWPTPFSVPLTVLLLAFLMGLQNAVVTKMSSAQIRTTHMT GVATDLGIEMGKMLYWNRRGTPPEAHVHSNRARLVLFASLLGMFTAGGIVGAAGFKHVGFVWVVPLAAVLLGLALPPLAS DFGHLAALWRTRRHRH >Mature_256_residues MRLLRHLMGRHRTPATNRLLGLLLAFNAGAVNAGGFLVVHSYTSHMTGFLSTVADNLVLGNMALVLAAVGTLWAFMSGAG TTAIMVNWARHHRLRSGFALPLLLEAVLMLLFGLMGAITLGWPTPFSVPLTVLLLAFLMGLQNAVVTKMSSAQIRTTHMT GVATDLGIEMGKMLYWNRRGTPPEAHVHSNRARLVLFASLLGMFTAGGIVGAAGFKHVGFVWVVPLAAVLLGLALPPLAS DFGHLAALWRTRRHRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27554; Mature: 27554
Theoretical pI: Translated: 12.46; Mature: 12.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLRHLMGRHRTPATNRLLGLLLAFNAGAVNAGGFLVVHSYTSHMTGFLSTVADNLVLG CHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHH NMALVLAAVGTLWAFMSGAGTTAIMVNWARHHRLRSGFALPLLLEAVLMLLFGLMGAITL HHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC GWPTPFSVPLTVLLLAFLMGLQNAVVTKMSSAQIRTTHMTGVATDLGIEMGKMLYWNRRG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHEECCCC TPPEAHVHSNRARLVLFASLLGMFTAGGIVGAAGFKHVGFVWVVPLAAVLLGLALPPLAS CCCCHHHCCCCHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHH DFGHLAALWRTRRHRH HHHHHHHHHHHHHCCC >Mature Secondary Structure MRLLRHLMGRHRTPATNRLLGLLLAFNAGAVNAGGFLVVHSYTSHMTGFLSTVADNLVLG CHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHH NMALVLAAVGTLWAFMSGAGTTAIMVNWARHHRLRSGFALPLLLEAVLMLLFGLMGAITL HHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC GWPTPFSVPLTVLLLAFLMGLQNAVVTKMSSAQIRTTHMTGVATDLGIEMGKMLYWNRRG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHEECCCC TPPEAHVHSNRARLVLFASLLGMFTAGGIVGAAGFKHVGFVWVVPLAAVLLGLALPPLAS CCCCHHHCCCCHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHH DFGHLAALWRTRRHRH HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA