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The map label for this gene is 120608926

Identifier: 120608926

GI number: 120608926

Start: 246645

End: 247649

Strand: Direct

Name: 120608926

Synonym: Aave_0221

Alternate gene names: NA

Gene position: 246645-247649 (Clockwise)

Preceding gene: 120608924

Following gene: 120608928

Centisome position: 4.61

GC content: 70.05

Gene sequence:

>1005_bases
ATGCGTTGCAATGGCCGCATGCCGTCCCCGTTCCTCACCCGCTGCCTGGAGGGCGCCAAGCGCGTCATCCAGCCCATCAT
GCCGCTCGTGCGGGCCGTCAATCTCTGGCTCGACGCCGACGGCCTGCGGATGAGCGCGGCCATGTCGTTCTACGGCATGC
TGAGCCTGGCGCCTTTGCTGCTGCTGCTGGTGGGGGTGCTGGGCTGGTGGATCGACAAGTCCTACCTCGAAACCAACCTG
ATCGCCCAGGTGCAGTCCGTGATGGGCGAGCGCGGCGCGGAGGTCGTGAAGCTCGCACTGTCCAGCGCCCGGGAGCCCTC
CGAAGGCCGGCTGGCCTCCATCGCGGGCTTCGTGCTGCTGCTGTCGGGCGCGACCGGGGTGTTCGTGGAACTGCAATCCG
CCCTGGAGCGGCTCTGGACGTCCGGCCACCCCCCCGCGACCGACAACAAGGCCTGGTGGCGCATGGCCTCGCTGCGGCTG
CGCGGCCTGGCGTACGTGCTGGCCATCGGTTTCCTGCTGCTGATCTCGCTGGTCGTCTCCACGGCGATCCACGTGGTGGC
CAACTGGGCGAGCGCGCGCCTGCCCTTCGCCTCCGGGCCCCTCCTGCAACTGGTCAACGAACTGGTCGCCTTCGGCATCG
CGGTGCTGCTGTTCGTGGGGCTGATGCGCATCGGGACCGGGCCCAAGCCGCCGATGGCCTGCCTGGTGTTCGGCGCCGTG
GTGGGGGCGATCCTGTTCACGGTGGGAAAACAACTGCTGGCACTCTACCTGGCCACGGCGGCCGTGGTGTCGGCCTACGG
GGCCGCGGGCTCGCTCGTCGTGCTGCTCATGTGGATCTATTTCTCGTCGGCGGTGCTGCTGTTCTCCGCCAGCTGCGCCC
GTGCCCTGCAGGAAGCGCGGGCCGAGCATATGGGGCAGCGTGTGGACGCCGCCCATGCCGAGAACGTGCCCGCCTCCACC
TCGCCGAAGCCACCGGCACCCGCCGCGGCGGCCGGCGCGCGCTGA

Upstream 100 bases:

>100_bases
GCCTGCGGTTATCCCGGCGGTGGGGAATGGCATAGGGAGGGCCGGTGTCCCCCCTGCGGGTGTGCAATGGCGAAGTGCTC
CGACACCCGGCGGCTCGACG

Downstream 100 bases:

>100_bases
ACACGGGCCGGCCGCCGGCGGTCAGCGCGCCGCCGGCCGCAGCGTGTCCGGGGAAAGGCGAAGGACCCGCGCCAGTTCCA
GCGCGTTGCGGGGCGCATGG

Product: ribonuclease BN

Products: NA

Alternate protein names: Ribonuclease; Ribonuclease Bn; Exoribonuclease II; YihY Family Protein; Ribonuclease RNAse BN Transmembrane Protein; Ribonuclease BN Family Protein; BrkB Transmembrane Protein; BrkB-Like Protein; BrkB-Like Serum-Resistance Protein; Exoribonuclease BN Transmembrane Protein; Serum Resistance Protein; TRNA-Processing RNAse BN; Ribonuclease BN-Like Family Protein; Ribonuclease BN Falily; Ribonuclease BN-Like Family; Ribonuclease RN

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MRCNGRMPSPFLTRCLEGAKRVIQPIMPLVRAVNLWLDADGLRMSAAMSFYGMLSLAPLLLLLVGVLGWWIDKSYLETNL
IAQVQSVMGERGAEVVKLALSSAREPSEGRLASIAGFVLLLSGATGVFVELQSALERLWTSGHPPATDNKAWWRMASLRL
RGLAYVLAIGFLLLISLVVSTAIHVVANWASARLPFASGPLLQLVNELVAFGIAVLLFVGLMRIGTGPKPPMACLVFGAV
VGAILFTVGKQLLALYLATAAVVSAYGAAGSLVVLLMWIYFSSAVLLFSASCARALQEARAEHMGQRVDAAHAENVPAST
SPKPPAPAAAAGAR

Sequences:

>Translated_334_residues
MRCNGRMPSPFLTRCLEGAKRVIQPIMPLVRAVNLWLDADGLRMSAAMSFYGMLSLAPLLLLLVGVLGWWIDKSYLETNL
IAQVQSVMGERGAEVVKLALSSAREPSEGRLASIAGFVLLLSGATGVFVELQSALERLWTSGHPPATDNKAWWRMASLRL
RGLAYVLAIGFLLLISLVVSTAIHVVANWASARLPFASGPLLQLVNELVAFGIAVLLFVGLMRIGTGPKPPMACLVFGAV
VGAILFTVGKQLLALYLATAAVVSAYGAAGSLVVLLMWIYFSSAVLLFSASCARALQEARAEHMGQRVDAAHAENVPAST
SPKPPAPAAAAGAR
>Mature_334_residues
MRCNGRMPSPFLTRCLEGAKRVIQPIMPLVRAVNLWLDADGLRMSAAMSFYGMLSLAPLLLLLVGVLGWWIDKSYLETNL
IAQVQSVMGERGAEVVKLALSSAREPSEGRLASIAGFVLLLSGATGVFVELQSALERLWTSGHPPATDNKAWWRMASLRL
RGLAYVLAIGFLLLISLVVSTAIHVVANWASARLPFASGPLLQLVNELVAFGIAVLLFVGLMRIGTGPKPPMACLVFGAV
VGAILFTVGKQLLALYLATAAVVSAYGAAGSLVVLLMWIYFSSAVLLFSASCARALQEARAEHMGQRVDAAHAENVPAST
SPKPPAPAAAAGAR

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35389; Mature: 35389

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA