| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120608862
Identifier: 120608862
GI number: 120608862
Start: 168874
End: 169602
Strand: Direct
Name: 120608862
Synonym: Aave_0154
Alternate gene names: NA
Gene position: 168874-169602 (Clockwise)
Preceding gene: 120608861
Following gene: 120608863
Centisome position: 3.15
GC content: 70.78
Gene sequence:
>729_bases ATGGCGGACACCTATGTACTGGTCCACGGCGCCTGGCACACGGGCGAAACCCTGGCGGCGACGGCGAAGTACCTGCGCGC GCGCGGCCACACCGTGCACTGCCCCACGCTGCCGGGCAACCGCCCCGGCGACGGCACGGCCCCGCTGGGCCTGCAGGACG CGATCGACGGGCTGGTGCAGTTCCTGGAATCGAATGACCTGAAGGACGTGCGCCTCGTCGGCCACAGCTATGGCGGCATG CTGCTCTCCGGCGCGGCCGACCGCGTGCCCGAACGCATCCGGCGGCTGGTGTACGTGAACGCCTTCGTGCCGCTGCCCGG CGAATCCCTGGCCGACATGGCGCCGCCCTACTACCGGGCGATGTTCGAAAGCATCGCTGCTGCGAACGGCGGCGGGGTGC AACTGCCCTACGAGGTCTGGCGCGAATCCTTCATCAACGACGCCGATGCGGAGCTGGCGCGCACCACCTATGCGCTGCTG CACCCGCAGCCGCTGCGCTGCCTGACCGACCCCATCACCCTCTCGCAGCCCACTGCCGCACTGGCGCTGGGCAAGTCGTA CCTGAACTGCCGGGAGGACACCGCGCTCCCCCACAGCCTGCCCTGGCACCCGCGCCTGTCGGAGCGGCTGGGCCTGTTCC GATACGTGGAGGCCAGCGGCAGCCACGAAGCGCTGTTCACCGACCCCGAAGGCTTCGCGCGCGGCATCGAGCGCGCGGGG CGGGATTGA
Upstream 100 bases:
>100_bases CTGCCTGGCACCTTGCGTCCGCCGGCCTGGCACGCAGCGGCCATCCGCGGCCCTGCCGCCGGGCCACCATGGGTCTCCCA CCACACAAGGAGACAACGAC
Downstream 100 bases:
>100_bases TCCGCGGGCCCGCACACGGACGCCATTCAGGAGACGACACCATGCAAGCCATCGCACGCCATTCACGCGCCGCCACTGCC TTCGCAGCCGCTGTCGGCAG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Esterase EstC; Alpha/Beta Hydrolase Fold; Salicylate Esterase; Alpha/Beta Hydrolase; Alpha/Beta Hydrolase Superfamily Protein; Alpha/Beta Hydrolase Family Protein; Hydrolase; Lysophospholipase; Hydrolase Alpha/Beta Fold Family Protein; Facilitator Transporter; Alkyl Salicylate Esterase; Alpha/Beta Hydrolase Fold-Containing Protein; Hydrolase Or Acyltransferase Of Alpha/Beta Superfamily
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MADTYVLVHGAWHTGETLAATAKYLRARGHTVHCPTLPGNRPGDGTAPLGLQDAIDGLVQFLESNDLKDVRLVGHSYGGM LLSGAADRVPERIRRLVYVNAFVPLPGESLADMAPPYYRAMFESIAAANGGGVQLPYEVWRESFINDADAELARTTYALL HPQPLRCLTDPITLSQPTAALALGKSYLNCREDTALPHSLPWHPRLSERLGLFRYVEASGSHEALFTDPEGFARGIERAG RD
Sequences:
>Translated_242_residues MADTYVLVHGAWHTGETLAATAKYLRARGHTVHCPTLPGNRPGDGTAPLGLQDAIDGLVQFLESNDLKDVRLVGHSYGGM LLSGAADRVPERIRRLVYVNAFVPLPGESLADMAPPYYRAMFESIAAANGGGVQLPYEVWRESFINDADAELARTTYALL HPQPLRCLTDPITLSQPTAALALGKSYLNCREDTALPHSLPWHPRLSERLGLFRYVEASGSHEALFTDPEGFARGIERAG RD >Mature_241_residues ADTYVLVHGAWHTGETLAATAKYLRARGHTVHCPTLPGNRPGDGTAPLGLQDAIDGLVQFLESNDLKDVRLVGHSYGGML LSGAADRVPERIRRLVYVNAFVPLPGESLADMAPPYYRAMFESIAAANGGGVQLPYEVWRESFINDADAELARTTYALLH PQPLRCLTDPITLSQPTAALALGKSYLNCREDTALPHSLPWHPRLSERLGLFRYVEASGSHEALFTDPEGFARGIERAGR D
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26404; Mature: 26273
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADTYVLVHGAWHTGETLAATAKYLRARGHTVHCPTLPGNRPGDGTAPLGLQDAIDGLVQ CCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHH FLESNDLKDVRLVGHSYGGMLLSGAADRVPERIRRLVYVNAFVPLPGESLADMAPPYYRA HHHCCCCCCEEEECCCCCCEEECCHHHHHHHHHHHHHHHEEECCCCCCHHHHHCCHHHHH MFESIAAANGGGVQLPYEVWRESFINDADAELARTTYALLHPQPLRCLTDPITLSQPTAA HHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHH LALGKSYLNCREDTALPHSLPWHPRLSERLGLFRYVEASGSHEALFTDPEGFARGIERAG HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCEEEECHHHHHHHHHHCC RD CC >Mature Secondary Structure ADTYVLVHGAWHTGETLAATAKYLRARGHTVHCPTLPGNRPGDGTAPLGLQDAIDGLVQ CCCEEEEEECCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHH FLESNDLKDVRLVGHSYGGMLLSGAADRVPERIRRLVYVNAFVPLPGESLADMAPPYYRA HHHCCCCCCEEEECCCCCCEEECCHHHHHHHHHHHHHHHEEECCCCCCHHHHHCCHHHHH MFESIAAANGGGVQLPYEVWRESFINDADAELARTTYALLHPQPLRCLTDPITLSQPTAA HHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHH LALGKSYLNCREDTALPHSLPWHPRLSERLGLFRYVEASGSHEALFTDPEGFARGIERAG HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCEEEECHHHHHHHHHHCC RD CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA