| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is acsA1 [H]
Identifier: 120608827
GI number: 120608827
Start: 130284
End: 132467
Strand: Direct
Name: acsA1 [H]
Synonym: Aave_0119
Alternate gene names: 120608827
Gene position: 130284-132467 (Clockwise)
Preceding gene: 120608826
Following gene: 120608830
Centisome position: 2.43
GC content: 72.16
Gene sequence:
>2184_bases ATGGAGACAACCACCCCCCCGCCGCGCAGCGCGGCCGCTGCCGCCGCAGCGCACGCCCCCTTCGTCCCGCAGATCCGGCT CTACCAGGAATGGCTGCACGCCAGGCATGGCCTGCGGTTCGGCGATTACGAAGCCCTCTGGCGCTGGTCCGTGACCGATC TGGACGCCTTCTGGCAGAGCATCTGGGATTACTTCGGCCTCGAATCGCCCACGCCGCACACGGCCGTGCTGGCCCGCAAC ACCATGCCGGGCGCCGAATGGTTTCCCGGCGCCCAGGTGAATTACGCGCGCCAGGCCCTGCGGCATGCCGACGCCGCGCA TGCGGCCGGGCAGCCGGCCATCATCAGCCGCAACGAGCGCGGCGAGCACCGCGAACTGTCCTGGCCCGAGCTGCGCAGGC AGGTGGCGGCGCTGGCCTTGCACCTGCGCGCGCAGGGCGTGGGGCCGGGCGACCGCGTCGCGGCCTATCTGCCCAACATC CCCGAAGCCATGGTGGCCCTGCTGGCCACGGCCAGCCTGGGCGCCATCTGGAGCGTGTGCGCGCCCGACATGGGCACGGC CGCGGTGCTGGACCGCTTCCGGCAGATCGAACCCAAGGCGCTGATCGCCGTGGACGGCGTGACCTACGGCGGCCGGGACC TCGACCGCCGCGGCGTGCTCGCCGAATTGCGCGCCGCCCTGCCCACGCTGGAACACGTGGTCGTCGTGGACCAGCTCGGC ACGGCGGGCACCATCGCCGGCTGCGTGGAATACACCCAGGCCACCGCGCGGGACGATGCCGGGGTGGCGTCCTTCGAGCC GCTCTGGCTGCCGTTCGACCATCCGCTCTGGATCGTCTATTCCAGCGGCACCACCGGCCTGCCCAAGCCCATCGTGCACG GCCACGGTGGCATGGTGCTGGTGGCGCTGCTGCTCAAGGGCCTGCACAACGACATCGGCCCGAGCCACGTGCCCAACTCG TTCGGCGAGCGCTACCACTGGTACAGCTCCACTGGCTGGGTCATGTGGAACGCGCAGGCGAGCGGCCTGCTCTCGGGCAC CACCTGCGTGATCTACGACGGCAACCCGGGCGGCAGCCGCGAGCGCCCCGACTGGGGCACGCTCTGGCGCTTCGCCGCCG AGACCGGCGTGACCTTTTTCGGCGCGGGCGCCGCCTTCTACGCCAACTGCATGAAGGCGGGGATCGATCTCGCGGCCTGC GGCGACCTTTCCCGCATCCGCGCGCTGGGCACCACGGGCTCGCCGCTCTCGCCGGAGGTGCAGGAGTGGGGCACGGCGCA ATTCGCGCGCATCCAGGCCCGAGCCGGGAATGCTGCCAGCAGCGAGCCGATCTGGTGGGACAACATCTCCGGCGGCACGG ATTTCTGCGGCGCCTTCATCGGCGGCCACCGCGAGCTGCCCCAGGTGCCCGGCGAAATGCAGTGCCGCATGCTGGGCGCG GCGGTGGAGTCCTGGGACGAGGCGGGCCGGCCCGTCACCGGCGCGGTGGGCGAGCTGGTCTGCACGCAGCCCATTCCCTC CATGCCGCTCTACTTCTGGGGCGATGCCCCCGCGGGGGCGCCGGCACTGCCGGGCGACCCGCAGGGGCCGCGCTATCTCG CGAGCTATTTCGACATGTACCCGCCCGGCCACGGCCGCCGGCCCGGCGGCGGCGACGGCCCCGCGTCCATGGGCGCGGTC TGGCGCCACGGCGACTGGCTGCGCGTCGGTCCCGAAGGCCGCTGCGTGATCTACGGCCGCAGCGACGCCACCATCAACCG CCACGGCCTGCGCATGGGCACCAGCGAGCTGTACCGCGCGGTGGAGGCCTTGCCCGAAGTGCTCGACAGCCTCGTGGTGG ACCTGGAATACCTGGGGCGCGAAAGCCACATGCCGCTCTTCGTGGCGCTGCGCGAGGGCGCCGCGCTGGACGATGCGCTG CGCGAACGCATCGCAGCTGCCATCCGCACCGCGCTCTCGCCACGCTTCGTGCCCGACGAGATCGTGCAGGTGGCCGAGGT GCCGCGCACCCTCACGGGCAAGAAGCAGGAGCTGCCCATCAAGAAGCTGCTGCTCGGCCAGCCGCTGGAGAAGGTGGTGA ACCGCGACGCCATGGCCAATCCCGGCTGCCTTGGCTGGTACGAGGATTTCGCGCGCCGGCACCTGGCGCGCACCGCTGCC GTCGCCGGCGCCCCGGGGGCTTGA
Upstream 100 bases:
>100_bases CGTGAAGGAACTCAAGGAAGACTGATCCGGCGCCTGCCTGTCAAGCCCGGGACGCCCCGGCGGTGACACGCCGGGGCACC ACGCAGTACGCTGCGTGGCC
Downstream 100 bases:
>100_bases GTTGCGGGGTTAGCGCCGCCCGGCGGGGGCCGGCGCGCGCACCAGCGTGCTCTTGCCGAACAGGCTCTCCACCAGATCCA CCACGAGTTCGGCGGTCTGG
Product: acetoacetyl-CoA synthetase
Products: NA
Alternate protein names: Acetoacetate--CoA ligase 1; Acyl-activating enzyme 1 [H]
Number of amino acids: Translated: 727; Mature: 727
Protein sequence:
>727_residues METTTPPPRSAAAAAAAHAPFVPQIRLYQEWLHARHGLRFGDYEALWRWSVTDLDAFWQSIWDYFGLESPTPHTAVLARN TMPGAEWFPGAQVNYARQALRHADAAHAAGQPAIISRNERGEHRELSWPELRRQVAALALHLRAQGVGPGDRVAAYLPNI PEAMVALLATASLGAIWSVCAPDMGTAAVLDRFRQIEPKALIAVDGVTYGGRDLDRRGVLAELRAALPTLEHVVVVDQLG TAGTIAGCVEYTQATARDDAGVASFEPLWLPFDHPLWIVYSSGTTGLPKPIVHGHGGMVLVALLLKGLHNDIGPSHVPNS FGERYHWYSSTGWVMWNAQASGLLSGTTCVIYDGNPGGSRERPDWGTLWRFAAETGVTFFGAGAAFYANCMKAGIDLAAC GDLSRIRALGTTGSPLSPEVQEWGTAQFARIQARAGNAASSEPIWWDNISGGTDFCGAFIGGHRELPQVPGEMQCRMLGA AVESWDEAGRPVTGAVGELVCTQPIPSMPLYFWGDAPAGAPALPGDPQGPRYLASYFDMYPPGHGRRPGGGDGPASMGAV WRHGDWLRVGPEGRCVIYGRSDATINRHGLRMGTSELYRAVEALPEVLDSLVVDLEYLGRESHMPLFVALREGAALDDAL RERIAAAIRTALSPRFVPDEIVQVAEVPRTLTGKKQELPIKKLLLGQPLEKVVNRDAMANPGCLGWYEDFARRHLARTAA VAGAPGA
Sequences:
>Translated_727_residues METTTPPPRSAAAAAAAHAPFVPQIRLYQEWLHARHGLRFGDYEALWRWSVTDLDAFWQSIWDYFGLESPTPHTAVLARN TMPGAEWFPGAQVNYARQALRHADAAHAAGQPAIISRNERGEHRELSWPELRRQVAALALHLRAQGVGPGDRVAAYLPNI PEAMVALLATASLGAIWSVCAPDMGTAAVLDRFRQIEPKALIAVDGVTYGGRDLDRRGVLAELRAALPTLEHVVVVDQLG TAGTIAGCVEYTQATARDDAGVASFEPLWLPFDHPLWIVYSSGTTGLPKPIVHGHGGMVLVALLLKGLHNDIGPSHVPNS FGERYHWYSSTGWVMWNAQASGLLSGTTCVIYDGNPGGSRERPDWGTLWRFAAETGVTFFGAGAAFYANCMKAGIDLAAC GDLSRIRALGTTGSPLSPEVQEWGTAQFARIQARAGNAASSEPIWWDNISGGTDFCGAFIGGHRELPQVPGEMQCRMLGA AVESWDEAGRPVTGAVGELVCTQPIPSMPLYFWGDAPAGAPALPGDPQGPRYLASYFDMYPPGHGRRPGGGDGPASMGAV WRHGDWLRVGPEGRCVIYGRSDATINRHGLRMGTSELYRAVEALPEVLDSLVVDLEYLGRESHMPLFVALREGAALDDAL RERIAAAIRTALSPRFVPDEIVQVAEVPRTLTGKKQELPIKKLLLGQPLEKVVNRDAMANPGCLGWYEDFARRHLARTAA VAGAPGA >Mature_727_residues METTTPPPRSAAAAAAAHAPFVPQIRLYQEWLHARHGLRFGDYEALWRWSVTDLDAFWQSIWDYFGLESPTPHTAVLARN TMPGAEWFPGAQVNYARQALRHADAAHAAGQPAIISRNERGEHRELSWPELRRQVAALALHLRAQGVGPGDRVAAYLPNI PEAMVALLATASLGAIWSVCAPDMGTAAVLDRFRQIEPKALIAVDGVTYGGRDLDRRGVLAELRAALPTLEHVVVVDQLG TAGTIAGCVEYTQATARDDAGVASFEPLWLPFDHPLWIVYSSGTTGLPKPIVHGHGGMVLVALLLKGLHNDIGPSHVPNS FGERYHWYSSTGWVMWNAQASGLLSGTTCVIYDGNPGGSRERPDWGTLWRFAAETGVTFFGAGAAFYANCMKAGIDLAAC GDLSRIRALGTTGSPLSPEVQEWGTAQFARIQARAGNAASSEPIWWDNISGGTDFCGAFIGGHRELPQVPGEMQCRMLGA AVESWDEAGRPVTGAVGELVCTQPIPSMPLYFWGDAPAGAPALPGDPQGPRYLASYFDMYPPGHGRRPGGGDGPASMGAV WRHGDWLRVGPEGRCVIYGRSDATINRHGLRMGTSELYRAVEALPEVLDSLVVDLEYLGRESHMPLFVALREGAALDDAL RERIAAAIRTALSPRFVPDEIVQVAEVPRTLTGKKQELPIKKLLLGQPLEKVVNRDAMANPGCLGWYEDFARRHLARTAA VAGAPGA
Specific function: Involved in poly-3-hydroxybutyrate degradation. Activates acetoacetate to acetoacetyl-CoA [H]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI31982927, Length=685, Percent_Identity=34.7445255474453, Blast_Score=387, Evalue=1e-107, Organism=Homo sapiens, GI28416953, Length=664, Percent_Identity=25.6024096385542, Blast_Score=171, Evalue=3e-42, Organism=Homo sapiens, GI8923896, Length=684, Percent_Identity=25.2923976608187, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI253970489, Length=696, Percent_Identity=24.5689655172414, Blast_Score=143, Evalue=6e-34, Organism=Homo sapiens, GI13375727, Length=692, Percent_Identity=23.5549132947977, Blast_Score=134, Evalue=3e-31, Organism=Escherichia coli, GI1790505, Length=683, Percent_Identity=24.597364568082, Blast_Score=153, Evalue=3e-38, Organism=Escherichia coli, GI1786529, Length=659, Percent_Identity=24.4309559939302, Blast_Score=125, Evalue=9e-30, Organism=Caenorhabditis elegans, GI17569507, Length=687, Percent_Identity=31.8777292576419, Blast_Score=347, Evalue=2e-95, Organism=Caenorhabditis elegans, GI71982997, Length=681, Percent_Identity=24.6696035242291, Blast_Score=138, Evalue=1e-32, Organism=Caenorhabditis elegans, GI71983001, Length=681, Percent_Identity=24.6696035242291, Blast_Score=137, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6323182, Length=688, Percent_Identity=25.8720930232558, Blast_Score=178, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6319264, Length=688, Percent_Identity=25.1453488372093, Blast_Score=158, Evalue=3e-39, Organism=Drosophila melanogaster, GI24667955, Length=678, Percent_Identity=23.8938053097345, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI62472339, Length=584, Percent_Identity=24.3150684931507, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI24667959, Length=551, Percent_Identity=23.5934664246824, Blast_Score=117, Evalue=4e-26, Organism=Drosophila melanogaster, GI21355225, Length=654, Percent_Identity=24.9235474006116, Blast_Score=116, Evalue=6e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005914 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.16 [H]
Molecular weight: Translated: 78385; Mature: 78385
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METTTPPPRSAAAAAAAHAPFVPQIRLYQEWLHARHGLRFGDYEALWRWSVTDLDAFWQS CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHEEECHHHHHHHHHH IWDYFGLESPTPHTAVLARNTMPGAEWFPGAQVNYARQALRHADAAHAAGQPAIISRNER HHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCC GEHRELSWPELRRQVAALALHLRAQGVGPGDRVAAYLPNIPEAMVALLATASLGAIWSVC CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH APDMGTAAVLDRFRQIEPKALIAVDGVTYGGRDLDRRGVLAELRAALPTLEHVVVVDQLG CCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHEEEEECCC TAGTIAGCVEYTQATARDDAGVASFEPLWLPFDHPLWIVYSSGTTGLPKPIVHGHGGMVL CCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCEECCCHHHH VALLLKGLHNDIGPSHVPNSFGERYHWYSSTGWVMWNAQASGLLSGTTCVIYDGNPGGSR HHHHHHHHHCCCCCCCCCHHHHCCEEEECCCCEEEECCCCCCEECCCEEEEECCCCCCCC ERPDWGTLWRFAAETGVTFFGAGAAFYANCMKAGIDLAACGDLSRIRALGTTGSPLSPEV CCCCHHHHHHHHHHCCCEEEECHHHHHHHHHHHCCCEEECCCHHHHHHCCCCCCCCCCCH QEWGTAQFARIQARAGNAASSEPIWWDNISGGTDFCGAFIGGHRELPQVPGEMQCRMLGA HHCCCHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHH AVESWDEAGRPVTGAVGELVCTQPIPSMPLYFWGDAPAGAPALPGDPQGPRYLASYFDMY HHHHHHHCCCCCCCCHHHEEECCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCC PPGHGRRPGGGDGPASMGAVWRHGDWLRVGPEGRCVIYGRSDATINRHGLRMGTSELYRA CCCCCCCCCCCCCCHHHCHHHCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHH VEALPEVLDSLVVDLEYLGRESHMPLFVALREGAALDDALRERIAAAIRTALSPRFVPDE HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHH IVQVAEVPRTLTGKKQELPIKKLLLGQPLEKVVNRDAMANPGCLGWYEDFARRHLARTAA HHHHHHCCHHHCCCCCCCCHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH VAGAPGA CCCCCCC >Mature Secondary Structure METTTPPPRSAAAAAAAHAPFVPQIRLYQEWLHARHGLRFGDYEALWRWSVTDLDAFWQS CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHEEECHHHHHHHHHH IWDYFGLESPTPHTAVLARNTMPGAEWFPGAQVNYARQALRHADAAHAAGQPAIISRNER HHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCC GEHRELSWPELRRQVAALALHLRAQGVGPGDRVAAYLPNIPEAMVALLATASLGAIWSVC CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH APDMGTAAVLDRFRQIEPKALIAVDGVTYGGRDLDRRGVLAELRAALPTLEHVVVVDQLG CCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHEEEEECCC TAGTIAGCVEYTQATARDDAGVASFEPLWLPFDHPLWIVYSSGTTGLPKPIVHGHGGMVL CCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCEECCCHHHH VALLLKGLHNDIGPSHVPNSFGERYHWYSSTGWVMWNAQASGLLSGTTCVIYDGNPGGSR HHHHHHHHHCCCCCCCCCHHHHCCEEEECCCCEEEECCCCCCEECCCEEEEECCCCCCCC ERPDWGTLWRFAAETGVTFFGAGAAFYANCMKAGIDLAACGDLSRIRALGTTGSPLSPEV CCCCHHHHHHHHHHCCCEEEECHHHHHHHHHHHCCCEEECCCHHHHHHCCCCCCCCCCCH QEWGTAQFARIQARAGNAASSEPIWWDNISGGTDFCGAFIGGHRELPQVPGEMQCRMLGA HHCCCHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHH AVESWDEAGRPVTGAVGELVCTQPIPSMPLYFWGDAPAGAPALPGDPQGPRYLASYFDMY HHHHHHHCCCCCCCCHHHEEECCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCC PPGHGRRPGGGDGPASMGAVWRHGDWLRVGPEGRCVIYGRSDATINRHGLRMGTSELYRA CCCCCCCCCCCCCCHHHCHHHCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHH VEALPEVLDSLVVDLEYLGRESHMPLFVALREGAALDDALRERIAAAIRTALSPRFVPDE HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHH IVQVAEVPRTLTGKKQELPIKKLLLGQPLEKVVNRDAMANPGCLGWYEDFARRHLARTAA HHHHHHCCHHHCCCCCCCCHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH VAGAPGA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10735852; 11481430 [H]