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The map label for this gene is yjfR [C]

Identifier: 120608818

GI number: 120608818

Start: 116287

End: 117339

Strand: Direct

Name: yjfR [C]

Synonym: Aave_0110

Alternate gene names: 120608818

Gene position: 116287-117339 (Clockwise)

Preceding gene: 120608812

Following gene: 120608822

Centisome position: 2.17

GC content: 71.42

Gene sequence:

>1053_bases
ATGGCCCGTCCGTCCGCCTACAGCCACGCCGCCCCGATCGACCCGTCCCCCCTGCGGCTTCCGACGTCGGCCGACGGCCG
GTTCCGCAACGCAGCCCGGCCCCGCCGCATGGGCTGGCTGAAAGGCCTGCAGGTGATGCTGCGCATGGCGTTCGGCAAGC
CGGCCGGCACGGTGCCCGACCGCCCCGTGCCGGTGCGTGCGCTCACGCGGGAGGTGCTGCTGGCCGCGCCCGACATGTCG
CTGTGGCGCCTGGGCCATTCCACGGTCCTGCTCAAGATGCAGGGCGGTTTCTGGCTCACGGACCCGGTGTTCTCGGAGCG
TGCCTCTCCCGTGCCGTTCGCGGGGCCCCGGCGCTTCCACGCGCCGCCCCTGCGGATCGAAGACCTGCCGCCGCTGCGGG
GCGTGGTGCTGTCCCATGACCACTACGACCACCTGGACCGTGCTGCCATCCTCGCGCTGGTGCCGAAGGTGGAGCAGTTC
ATCGCCCCGCTGGGCGTGGGCGACCGCCTGGTGGGCTGGGGCGTGCCGGCCGACAAAGTGCGGCAGTTCGACTGGTGGCA
GGGCACCACCTTCGCCGGCGTGCAGCTGGTGTGCACACCGGCGCAGCATTTCTCGGGGCGGGGCCTCTCCGACGGCAACC
GCACGCTCTGGGCATCGTGGGTACTGATCGCGGGCAGCACCCGCGTTTTCTTCAGCGGTGATTCCGGATACTTCGACGGC
TTCCGCGTCATCGGCGAGCGCTACGGTCCGTTCAACCTGACGCTGATGGAAACCGGTGCCTACAACGCCGACTGGCCCGA
CGTGCACATGCAGCCCGAGCAGAGCCTGCAGGCGCACCTGGATGTGCAGGGGCGCCACTGCCTGCCCATCCACAACGGCA
CGTTCGACCTGTCCTTCCATGCCTGGACCGAGCCCTTCGAGCGCATCGGCGCGCTGGCCGCCGCACGCGGCGTGCCGCTG
CTGACGCCCGTCATGGGCGAGCGCGTGGACATCCGCTTGCCTGCGGCCACGCAGCCCTGGTGGCGCGATGCCGCCGCGCC
GGCCGCGTACTGA

Upstream 100 bases:

>100_bases
GGAGATTTTACACCGCACGGTTTACTTTTCTCAAAACAACACTACACTGTGCAGTGCACTTCGTAGTGCGTCTTTTTCCC
ATTTCCTTTTCCCCACTGCC

Downstream 100 bases:

>100_bases
ACCACCCGGAGCCGACCATGTTGAGCCGCGTCCTTCCCATCCGACGGCTTCTGTACGGCAGCCCCGCGCCCGTCCATGGC
GGCGGGGCCGAGCCTCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MARPSAYSHAAPIDPSPLRLPTSADGRFRNAARPRRMGWLKGLQVMLRMAFGKPAGTVPDRPVPVRALTREVLLAAPDMS
LWRLGHSTVLLKMQGGFWLTDPVFSERASPVPFAGPRRFHAPPLRIEDLPPLRGVVLSHDHYDHLDRAAILALVPKVEQF
IAPLGVGDRLVGWGVPADKVRQFDWWQGTTFAGVQLVCTPAQHFSGRGLSDGNRTLWASWVLIAGSTRVFFSGDSGYFDG
FRVIGERYGPFNLTLMETGAYNADWPDVHMQPEQSLQAHLDVQGRHCLPIHNGTFDLSFHAWTEPFERIGALAAARGVPL
LTPVMGERVDIRLPAATQPWWRDAAAPAAY

Sequences:

>Translated_350_residues
MARPSAYSHAAPIDPSPLRLPTSADGRFRNAARPRRMGWLKGLQVMLRMAFGKPAGTVPDRPVPVRALTREVLLAAPDMS
LWRLGHSTVLLKMQGGFWLTDPVFSERASPVPFAGPRRFHAPPLRIEDLPPLRGVVLSHDHYDHLDRAAILALVPKVEQF
IAPLGVGDRLVGWGVPADKVRQFDWWQGTTFAGVQLVCTPAQHFSGRGLSDGNRTLWASWVLIAGSTRVFFSGDSGYFDG
FRVIGERYGPFNLTLMETGAYNADWPDVHMQPEQSLQAHLDVQGRHCLPIHNGTFDLSFHAWTEPFERIGALAAARGVPL
LTPVMGERVDIRLPAATQPWWRDAAAPAAY
>Mature_349_residues
ARPSAYSHAAPIDPSPLRLPTSADGRFRNAARPRRMGWLKGLQVMLRMAFGKPAGTVPDRPVPVRALTREVLLAAPDMSL
WRLGHSTVLLKMQGGFWLTDPVFSERASPVPFAGPRRFHAPPLRIEDLPPLRGVVLSHDHYDHLDRAAILALVPKVEQFI
APLGVGDRLVGWGVPADKVRQFDWWQGTTFAGVQLVCTPAQHFSGRGLSDGNRTLWASWVLIAGSTRVFFSGDSGYFDGF
RVIGERYGPFNLTLMETGAYNADWPDVHMQPEQSLQAHLDVQGRHCLPIHNGTFDLSFHAWTEPFERIGALAAARGVPLL
TPVMGERVDIRLPAATQPWWRDAAAPAAY

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To K.pneumoniae romA [H]

Homologues:

Organism=Homo sapiens, GI170932483, Length=230, Percent_Identity=40.8695652173913, Blast_Score=185, Evalue=7e-47,
Organism=Homo sapiens, GI170932481, Length=230, Percent_Identity=40.8695652173913, Blast_Score=185, Evalue=7e-47,
Organism=Caenorhabditis elegans, GI25148824, Length=318, Percent_Identity=33.3333333333333, Blast_Score=184, Evalue=8e-47,
Organism=Caenorhabditis elegans, GI17543100, Length=318, Percent_Identity=33.3333333333333, Blast_Score=183, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI17543102, Length=318, Percent_Identity=33.3333333333333, Blast_Score=183, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI17543104, Length=288, Percent_Identity=36.8055555555556, Blast_Score=180, Evalue=8e-46,
Organism=Saccharomyces cerevisiae, GI6325154, Length=249, Percent_Identity=32.9317269076305, Blast_Score=112, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38726; Mature: 38595

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPSAYSHAAPIDPSPLRLPTSADGRFRNAARPRRMGWLKGLQVMLRMAFGKPAGTVPD
CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
RPVPVRALTREVLLAAPDMSLWRLGHSTVLLKMQGGFWLTDPVFSERASPVPFAGPRRFH
CCCCHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCEEEECHHHHCCCCCCCCCCCCCCC
APPLRIEDLPPLRGVVLSHDHYDHLDRAAILALVPKVEQFIAPLGVGDRLVGWGVPADKV
CCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHH
RQFDWWQGTTFAGVQLVCTPAQHFSGRGLSDGNRTLWASWVLIAGSTRVFFSGDSGYFDG
HCCCCCCCCEECCEEEEEECHHHCCCCCCCCCCCEEEEEEEEEECCEEEEECCCCCCCCH
FRVIGERYGPFNLTLMETGAYNADWPDVHMQPEQSLQAHLDVQGRHCLPIHNGTFDLSFH
HHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHEEECCCCCEEEEECCCEEEEEEH
AWTEPFERIGALAAARGVPLLTPVMGERVDIRLPAATQPWWRDAAAPAAY
HHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEECCCCCCHHHCCCCCCCC
>Mature Secondary Structure 
ARPSAYSHAAPIDPSPLRLPTSADGRFRNAARPRRMGWLKGLQVMLRMAFGKPAGTVPD
CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
RPVPVRALTREVLLAAPDMSLWRLGHSTVLLKMQGGFWLTDPVFSERASPVPFAGPRRFH
CCCCHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCEEEECHHHHCCCCCCCCCCCCCCC
APPLRIEDLPPLRGVVLSHDHYDHLDRAAILALVPKVEQFIAPLGVGDRLVGWGVPADKV
CCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHH
RQFDWWQGTTFAGVQLVCTPAQHFSGRGLSDGNRTLWASWVLIAGSTRVFFSGDSGYFDG
HCCCCCCCCEECCEEEEEECHHHCCCCCCCCCCCEEEEEEEEEECCEEEEECCCCCCCCH
FRVIGERYGPFNLTLMETGAYNADWPDVHMQPEQSLQAHLDVQGRHCLPIHNGTFDLSFH
HHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHEEECCCCCEEEEECCCEEEEEEH
AWTEPFERIGALAAARGVPLLTPVMGERVDIRLPAATQPWWRDAAAPAAY
HHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEECCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]