| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is fsr [H]
Identifier: 120608793
GI number: 120608793
Start: 88169
End: 89440
Strand: Direct
Name: fsr [H]
Synonym: Aave_0083
Alternate gene names: 120608793
Gene position: 88169-89440 (Clockwise)
Preceding gene: 120608788
Following gene: 120608794
Centisome position: 1.65
GC content: 72.25
Gene sequence:
>1272_bases ATGACCTCGATCAACGCACCCACGGCCACGCTGCGGCAGGACGCCCGCACCATCGGCCTCATCGGCCTGGCGCACGGCTC TTCGCACTTCTTCCACCTGCTGCTGCCGCCGCTGTTCCCCTTCCTCATCGCGGAGTTCGGCTACAGCTACTCCGAGCTGG GCCTGCTGGTGTCGGTGTTCTTCGTCATCTCCGGCGTGGGCCAGGCTCTGTCGGGCTTCATCGTGGACCGGGTCGGCGCG CGCCCGGTGATGTTCTTCGCGCTGTCGAGCTTCGTCCTGTCCGGCCTCGTGGCCAGCATCGCCACCGGTTATGCCGGGCT GATGGCGGCCGCGGCGCTGGCGGGCCTGGGCAACGCCCCCTTCCATCCGGTGGACTTCACCATCCTCAACAAGCGCGTGT CACCCCAGCGCCTGGGCCACGGCTTCTCGGTGCACGGCATCTCCGGCAACCTGGGCTGGGCCACCGCGCCCGTCTTCATG GCCGGCATCACCGCGGCCACCGGGTCCTGGCGGGCGGCCTGCCTCTGCGGCGGCCTGCTGGCGCTGGTCATCCTGTCCAT CATGGTCCTGAACCGCGACGCGCTCGACGACCGCCGGGGCAAGGCCGCACCCGCCGCGGGCAAGCCCGGCGCCGCCACCG CGCCGGCAGGCGCCCCGGCCGAACACCCCATGGCCTTCCTCCGGCTGCCTTCCGTCTGGCTCTGCTTCTCGTTCTTCTTC TGGACCACCTGCTCGCTGAGCGTCATCCAGAGCTTCGCCGGCCCCACGCTGCAGAAGATGTACGGCCTGCCGCTGTCCGT CACCTCCATGGTCGTCACCGGCTACATGCTGTGCGGCGCCGCCGGCATGGTGGTCGGCGGCTTCCTGGCCGGCCGCGTGG CCCGGCTGGAGCGCACCATCACCGTCTGCCTGCTGGCCACGGCCGTGCTGCTGGTCGCCGCGGGCACGGGCCTGCTGCCG GGCATGGCCGCCATGGTCTTCGTGGCGCTGGCGGGCGTGGGCACCGGCCTGGCCGGCCCCTCGCGCGACATGCTCATCAA GCGCGCCGCGCCGCCCGGCGCCACCGGCCGCGTCTATGGCACGGTGTACTCGGGCCTGGACCTCGGCTTCTGCATGGCCG CCCCGGTGTTCGGCGCCATGCTGGACGCGGGCATGACCTCCGGCATCTTCTACGGCTCGGCCGCCGCCCTGGTGCTGGGC GTGGCTTCGGCGGGTGTCGTCGGCATCGGCGTCGCGGCCAGGGCGCGCGCGCAGCGCATGGCCGTGGCATGA
Upstream 100 bases:
>100_bases TCCGTCCCCGGATGCGGAAAGTGCGGTGCTTGGCATGTTCGCGACAATCTTTGGCCGGCTATCGTAATCCGGACGCGGGG CGGCTTCTTAAGATCGCCGC
Downstream 100 bases:
>100_bases ACGGCGGCCCCACCGCATCCCCACCCACGGGAGGCGCCGCGCGTTGCCGGGCGTGCTGATCGAACAGCTGCACGGCGGGA ACTGCCTGCGCGTCTGCGTG
Product: major facilitator superfamily transporter
Products: fosmidomycin [Periplasm]; Proton [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MTSINAPTATLRQDARTIGLIGLAHGSSHFFHLLLPPLFPFLIAEFGYSYSELGLLVSVFFVISGVGQALSGFIVDRVGA RPVMFFALSSFVLSGLVASIATGYAGLMAAAALAGLGNAPFHPVDFTILNKRVSPQRLGHGFSVHGISGNLGWATAPVFM AGITAATGSWRAACLCGGLLALVILSIMVLNRDALDDRRGKAAPAAGKPGAATAPAGAPAEHPMAFLRLPSVWLCFSFFF WTTCSLSVIQSFAGPTLQKMYGLPLSVTSMVVTGYMLCGAAGMVVGGFLAGRVARLERTITVCLLATAVLLVAAGTGLLP GMAAMVFVALAGVGTGLAGPSRDMLIKRAAPPGATGRVYGTVYSGLDLGFCMAAPVFGAMLDAGMTSGIFYGSAAALVLG VASAGVVGIGVAARARAQRMAVA
Sequences:
>Translated_423_residues MTSINAPTATLRQDARTIGLIGLAHGSSHFFHLLLPPLFPFLIAEFGYSYSELGLLVSVFFVISGVGQALSGFIVDRVGA RPVMFFALSSFVLSGLVASIATGYAGLMAAAALAGLGNAPFHPVDFTILNKRVSPQRLGHGFSVHGISGNLGWATAPVFM AGITAATGSWRAACLCGGLLALVILSIMVLNRDALDDRRGKAAPAAGKPGAATAPAGAPAEHPMAFLRLPSVWLCFSFFF WTTCSLSVIQSFAGPTLQKMYGLPLSVTSMVVTGYMLCGAAGMVVGGFLAGRVARLERTITVCLLATAVLLVAAGTGLLP GMAAMVFVALAGVGTGLAGPSRDMLIKRAAPPGATGRVYGTVYSGLDLGFCMAAPVFGAMLDAGMTSGIFYGSAAALVLG VASAGVVGIGVAARARAQRMAVA >Mature_422_residues TSINAPTATLRQDARTIGLIGLAHGSSHFFHLLLPPLFPFLIAEFGYSYSELGLLVSVFFVISGVGQALSGFIVDRVGAR PVMFFALSSFVLSGLVASIATGYAGLMAAAALAGLGNAPFHPVDFTILNKRVSPQRLGHGFSVHGISGNLGWATAPVFMA GITAATGSWRAACLCGGLLALVILSIMVLNRDALDDRRGKAAPAAGKPGAATAPAGAPAEHPMAFLRLPSVWLCFSFFFW TTCSLSVIQSFAGPTLQKMYGLPLSVTSMVVTGYMLCGAAGMVVGGFLAGRVARLERTITVCLLATAVLLVAAGTGLLPG MAAMVFVALAGVGTGLAGPSRDMLIKRAAPPGATGRVYGTVYSGLDLGFCMAAPVFGAMLDAGMTSGIFYGSAAALVLGV ASAGVVGIGVAARARAQRMAVA
Specific function: Confers the resistance against fosmidomycin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786686, Length=295, Percent_Identity=26.4406779661017, Blast_Score=69, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43068; Mature: 42937
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSINAPTATLRQDARTIGLIGLAHGSSHFFHLLLPPLFPFLIAEFGYSYSELGLLVSVF CCCCCCCHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH FVISGVGQALSGFIVDRVGARPVMFFALSSFVLSGLVASIATGYAGLMAAAALAGLGNAP HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC FHPVDFTILNKRVSPQRLGHGFSVHGISGNLGWATAPVFMAGITAATGSWRAACLCGGLL CCCCCHHEECCCCCHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH ALVILSIMVLNRDALDDRRGKAAPAAGKPGAATAPAGAPAEHPMAFLRLPSVWLCFSFFF HHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHH WTTCSLSVIQSFAGPTLQKMYGLPLSVTSMVVTGYMLCGAAGMVVGGFLAGRVARLERTI HHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVCLLATAVLLVAAGTGLLPGMAAMVFVALAGVGTGLAGPSRDMLIKRAAPPGATGRVYG HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHEEECCCCCCCCCEEE TVYSGLDLGFCMAAPVFGAMLDAGMTSGIFYGSAAALVLGVASAGVVGIGVAARARAQRM HHHCCCHHHHHHHHHHHHHHHHHCHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AVA CCC >Mature Secondary Structure TSINAPTATLRQDARTIGLIGLAHGSSHFFHLLLPPLFPFLIAEFGYSYSELGLLVSVF CCCCCCHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH FVISGVGQALSGFIVDRVGARPVMFFALSSFVLSGLVASIATGYAGLMAAAALAGLGNAP HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC FHPVDFTILNKRVSPQRLGHGFSVHGISGNLGWATAPVFMAGITAATGSWRAACLCGGLL CCCCCHHEECCCCCHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH ALVILSIMVLNRDALDDRRGKAAPAAGKPGAATAPAGAPAEHPMAFLRLPSVWLCFSFFF HHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHH WTTCSLSVIQSFAGPTLQKMYGLPLSVTSMVVTGYMLCGAAGMVVGGFLAGRVARLERTI HHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVCLLATAVLLVAAGTGLLPGMAAMVFVALAGVGTGLAGPSRDMLIKRAAPPGATGRVYG HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHEEECCCCCCCCCEEE TVYSGLDLGFCMAAPVFGAMLDAGMTSGIFYGSAAALVLGVASAGVVGIGVAARARAQRM HHHCCCHHHHHHHHHHHHHHHHHCHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AVA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: fosmidomycin [Cytoplasm]; Proton [Periplasm] [C]
Specific reaction: fosmidomycin [Cytoplasm] + Proton [Periplasm] = fosmidomycin [Periplasm] + Proton [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8917080; 9278503 [H]