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The map label for this gene is tse [H]

Identifier: 120608748

GI number: 120608748

Start: 38740

End: 40416

Strand: Direct

Name: tse [H]

Synonym: Aave_0035

Alternate gene names: 120608748

Gene position: 38740-40416 (Clockwise)

Preceding gene: 120608747

Following gene: 120608754

Centisome position: 0.72

GC content: 68.63

Gene sequence:

>1677_bases
ATGAAATTCGATTCGCTCATGCGCGGGTTCACCATCCGCGTCCGCATGCTGGGGGCCATCGCGGTCGTACTGTCGCTGCT
CGGGCTGCTGGGTGGGGCCGGCATGCTGGGCATGTTCCGCATCCACGCGATGAGCGAGGAGTTCATCGGCCATTCCTTCT
CGGAGGTCAGCGCCATGGCCGAGCTGCGCGGCGAGATGGGCAACATCCGCCAGTACGAAAAGGACATGATCATCCAGTAC
GAAAAGCCCGAGGGCGTGCAGAAGGCGCACGCGGCCTGGCTGGAAAGCCTGGACCATGCCAGGAAGGTGGCGGCGCGATT
CCAGGACGGCGGGCAGGACAGGGACAACCAGCTCGCCACCGACATCGTGAAGCGGCTCGAAGCCTACCGGGGCCAGTTCG
CGAGCGTCGCGCGCCAGCTCGAGGCCGGCGGCTACGACAGCGCCACCATCGCCAACCGCATGAGCACCAAGGCCGTGGCG
GAATTCGCCGAGGCCGACAAGCTGCTCGCCCAATTGGACAGCGAGCTGCGCAAGGAGGTGGCAGAGGTGACCGCGCGCCA
GCAGACCGTGTCCGAGCAGACCAAGTGGCTGTTCGTGCTGGCGGTGCTGATCACCGTCGCGGTGGTGGTGCCGCTCACGC
TGCTGAACATGAATTCCATCTGCCGCCCGCTGGTGGAGGCGCGCCGCATGGCCCAGGCCATCGCTGGCGGCGACCTGTCG
CAGCGCATGCACGTGGAAGGCCGTGACGAGGTGGCCGACCTGCAGCGCGCGCTGCTGGGCATGCAACAGGGCCTGAGCGC
GCTCGTGTCGCAGGTGCGCGATGCGAGCGGCAGCATCGCCACCGCGAGCCAGGAAATCGCCTCGGGCAACCAGGACCTGT
CGTCCCGCACCGAGCAGACGGCCAGCAACGCGCAGGAGGCCGTGGCCTCGCTGTCGCAACTCACGGCCACGGTGCAGCAG
ACGGCCTCGTCCTCGCAGGTGGCCAACCAGCTCGTCGCCTCCGCATCGGGCATCGCCACGCGCGGCGGCAGCGTGGTGGA
GCAGGCCGTGGCCAGCATGCACGAGATCTCGGCCTCCAGCCGCAAGATCGGCGACATCATCGGCCTGATCGATTCCATCG
CCTTCCAAACCAATATCCTGGCGCTGAATGCAGCCGTGGAAGCAGCGCGTGCCGGCGAACAGGGCCGCGGCTTCGCCGTG
GTGGCCGGCGAAGTGCGCAGCCTCGCGCAGCGCAGCGCCCAGGCGGCCAGCGAGATCAAGGGCCTCATCAGCTCCAGCGT
GACGGCCGTGAACGGCGGCGTGCGCCACGTGGAGGACGCCGGCACCGCCATGAAGGAGATCGTGGAGAGCGTGCAGCGCG
TGACCGACATCATCGGCGAGATCAATTCCGCGTCCGCTGAGCAGTCCGCGGGCATCGGCCAGGTCAACGGCTCCGTGGGC
GAGATCGACCGCATGACCCAGCAGAACGCCGCGCTGGTGGAGCAGTCCGCCGCGGCCGCCCAGTCCCTGCGCGAGCAGGC
CGCGCGGCTGTCGCAGGTGGTGCAGCAGTTCCATCTGGACGATGCGGCGACGGCAGGGGGCTATGGCATGGGAGCGTCCG
GCTCCGCGTCTGCTTCTGGCTACGGTGAATCGGCGGCGCTGCCAGCCGGAGGGCGGACGGCGTTGCTGTCGGCTTGA

Upstream 100 bases:

>100_bases
TTACTCTCTGTTCGGTTACGCTTGCCCCATCAGTCTGCTACGTTTTGTTTCATTCATAGCCGGCCCGCATCAGCGGTCTG
GGGGATTAAGGAAGGCAATC

Downstream 100 bases:

>100_bases
GGGCAAGGAGAGGCGGGGGGGCTCTGCCCCCTGCCTCAGTTGCCGGGCGGTACGACTTCTTCTCGCTACCCTGTGTTGTT
CAGAGATGGCTCTGAACTCT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MKFDSLMRGFTIRVRMLGAIAVVLSLLGLLGGAGMLGMFRIHAMSEEFIGHSFSEVSAMAELRGEMGNIRQYEKDMIIQY
EKPEGVQKAHAAWLESLDHARKVAARFQDGGQDRDNQLATDIVKRLEAYRGQFASVARQLEAGGYDSATIANRMSTKAVA
EFAEADKLLAQLDSELRKEVAEVTARQQTVSEQTKWLFVLAVLITVAVVVPLTLLNMNSICRPLVEARRMAQAIAGGDLS
QRMHVEGRDEVADLQRALLGMQQGLSALVSQVRDASGSIATASQEIASGNQDLSSRTEQTASNAQEAVASLSQLTATVQQ
TASSSQVANQLVASASGIATRGGSVVEQAVASMHEISASSRKIGDIIGLIDSIAFQTNILALNAAVEAARAGEQGRGFAV
VAGEVRSLAQRSAQAASEIKGLISSSVTAVNGGVRHVEDAGTAMKEIVESVQRVTDIIGEINSASAEQSAGIGQVNGSVG
EIDRMTQQNAALVEQSAAAAQSLREQAARLSQVVQQFHLDDAATAGGYGMGASGSASASGYGESAALPAGGRTALLSA

Sequences:

>Translated_558_residues
MKFDSLMRGFTIRVRMLGAIAVVLSLLGLLGGAGMLGMFRIHAMSEEFIGHSFSEVSAMAELRGEMGNIRQYEKDMIIQY
EKPEGVQKAHAAWLESLDHARKVAARFQDGGQDRDNQLATDIVKRLEAYRGQFASVARQLEAGGYDSATIANRMSTKAVA
EFAEADKLLAQLDSELRKEVAEVTARQQTVSEQTKWLFVLAVLITVAVVVPLTLLNMNSICRPLVEARRMAQAIAGGDLS
QRMHVEGRDEVADLQRALLGMQQGLSALVSQVRDASGSIATASQEIASGNQDLSSRTEQTASNAQEAVASLSQLTATVQQ
TASSSQVANQLVASASGIATRGGSVVEQAVASMHEISASSRKIGDIIGLIDSIAFQTNILALNAAVEAARAGEQGRGFAV
VAGEVRSLAQRSAQAASEIKGLISSSVTAVNGGVRHVEDAGTAMKEIVESVQRVTDIIGEINSASAEQSAGIGQVNGSVG
EIDRMTQQNAALVEQSAAAAQSLREQAARLSQVVQQFHLDDAATAGGYGMGASGSASASGYGESAALPAGGRTALLSA
>Mature_558_residues
MKFDSLMRGFTIRVRMLGAIAVVLSLLGLLGGAGMLGMFRIHAMSEEFIGHSFSEVSAMAELRGEMGNIRQYEKDMIIQY
EKPEGVQKAHAAWLESLDHARKVAARFQDGGQDRDNQLATDIVKRLEAYRGQFASVARQLEAGGYDSATIANRMSTKAVA
EFAEADKLLAQLDSELRKEVAEVTARQQTVSEQTKWLFVLAVLITVAVVVPLTLLNMNSICRPLVEARRMAQAIAGGDLS
QRMHVEGRDEVADLQRALLGMQQGLSALVSQVRDASGSIATASQEIASGNQDLSSRTEQTASNAQEAVASLSQLTATVQQ
TASSSQVANQLVASASGIATRGGSVVEQAVASMHEISASSRKIGDIIGLIDSIAFQTNILALNAAVEAARAGEQGRGFAV
VAGEVRSLAQRSAQAASEIKGLISSSVTAVNGGVRHVEDAGTAMKEIVESVQRVTDIIGEINSASAEQSAGIGQVNGSVG
EIDRMTQQNAALVEQSAAAAQSLREQAARLSQVVQQFHLDDAATAGGYGMGASGSASASGYGESAALPAGGRTALLSA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=300, Percent_Identity=58, Blast_Score=292, Evalue=5e-80,
Organism=Escherichia coli, GI2367378, Length=327, Percent_Identity=54.7400611620795, Blast_Score=280, Evalue=2e-76,
Organism=Escherichia coli, GI1787690, Length=322, Percent_Identity=50.9316770186335, Blast_Score=272, Evalue=4e-74,
Organism=Escherichia coli, GI1788194, Length=326, Percent_Identity=50, Blast_Score=264, Evalue=9e-72,
Organism=Escherichia coli, GI1789453, Length=329, Percent_Identity=39.209726443769, Blast_Score=213, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 58490; Mature: 58490

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]