| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608723
Identifier: 120608723
GI number: 120608723
Start: 10504
End: 10764
Strand: Direct
Name: 120608723
Synonym: Aave_0010
Alternate gene names: NA
Gene position: 10504-10764 (Clockwise)
Preceding gene: 120608722
Following gene: 120608724
Centisome position: 0.2
GC content: 75.1
Gene sequence:
>261_bases ATGCCCCCTTCCACCCCCAAAGCCCTGCCCGCCATCGATCCCGACCGCTGCACGGGCTGCGGCCGGTGCGTGGCGGTCTG CGCACCGCATGTGCTGTCGCTGGACACAGGGGGCAGCCCCGGCCGGGAAGGTGCGCCTCCGCTGCCCTGGGGCCCCAAGC GGTCGGTGCTGCGCGACCCGGCGGGCTGCACGGGCTGCGCCCTGTGCGCCGTCCACTGCCCATTCGATGCCATCCGGATG GAGCGCACCGGGCCGCGGTGA
Upstream 100 bases:
>100_bases ATCACGCTGGACGCACAGCTCGTGGGCTGAGAGTCCGCGCTGGCATCATTGCCGGCAGCACGCCAGGACCGTGGCCGTGC CATCGCCTTGCCGGCCGTCC
Downstream 100 bases:
>100_bases AAGTCCGGCATTCCTGTACACTGCATCGCCATGTCGTTCGCACGCATCCCCAGCCCCCTGTTCCGCGCCCCCGTGGCCGC GGCGGCCTGCTGCGTGCGAA
Product: 4Fe-4S ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MPPSTPKALPAIDPDRCTGCGRCVAVCAPHVLSLDTGGSPGREGAPPLPWGPKRSVLRDPAGCTGCALCAVHCPFDAIRM ERTGPR
Sequences:
>Translated_86_residues MPPSTPKALPAIDPDRCTGCGRCVAVCAPHVLSLDTGGSPGREGAPPLPWGPKRSVLRDPAGCTGCALCAVHCPFDAIRM ERTGPR >Mature_85_residues PPSTPKALPAIDPDRCTGCGRCVAVCAPHVLSLDTGGSPGREGAPPLPWGPKRSVLRDPAGCTGCALCAVHCPFDAIRME RTGPR
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8877; Mature: 8746
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: PS00551 MOLYBDOPTERIN_PROK_1 ; PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 11.6 %Cys+Met (Translated Protein) 9.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 10.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPSTPKALPAIDPDRCTGCGRCVAVCAPHVLSLDTGGSPGREGAPPLPWGPKRSVLRDP CCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCC AGCTGCALCAVHCPFDAIRMERTGPR CCCCHHHHHHHHCCHHHHHCCCCCCC >Mature Secondary Structure PPSTPKALPAIDPDRCTGCGRCVAVCAPHVLSLDTGGSPGREGAPPLPWGPKRSVLRDP CCCCCCCCCCCCCCCCCCCHHHHHHHCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCC AGCTGCALCAVHCPFDAIRMERTGPR CCCCHHHHHHHHCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA