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The map label for this gene is motY [H]

Identifier: 119947169

GI number: 119947169

Start: 4385479

End: 4386366

Strand: Reverse

Name: motY [H]

Synonym: Ping_3567

Alternate gene names: 119947169

Gene position: 4386366-4385479 (Counterclockwise)

Preceding gene: 119947170

Following gene: 119947168

Centisome position: 96.2

GC content: 39.3

Gene sequence:

>888_bases
ATGAGTTGTAGCCTAAAACTTTTTTTAACCCTTTTACTTTTATTTACGGGGGGGATTGCCGCCATACCCATCCATTATCA
AGGAGAAATGGATAATACAACGTGGAAAACGGAGCTTAAGTTCGACCGCTGTGAGATTTATACGGAAATTCCAGACTGGG
GTTTTAAAGTATCTTTTATTGCAGAATCGGGTCAGAGTTTACAGCTGTTGATTTACTCGCGCATTCATTCTGCGGCAGCC
ATAAAGGAGTCATTTGCCGAGGTTATTAATGCCCCTTGGTATGAGCTGCAAGCCTCTCCACAAGAGCAGATTATGGCTGA
TAGTATTGGCGAGAATAGTATTAACTTTCGTCAGGGGGTAGAGACCATTTTCCAGCATATGCTCGCCGGCAGCTGGTTAC
AATTTTATTCCATGTCGAATACAGAGGTTATGTATATTGTTTCTCTTCCAACCACTTCATGGCAGAAAGAGACCGTTTCT
TTTAATCAATGCGCGAATCAATTACCCGTTATTAATTATGAAGAGATAAATCAGCTCTCTTTTAACTATATTGAAAATCA
ATATAAGCTAAATAAAACGCAAACTAAAGATTTGGTAAAACTCAGCGATTATATTAATAAAGATCAAAGTGTCGTAAAAA
TACTGATCGATGGACACTCGGATAAGTATGGAAATTCAAGCCAGAACCTCAGATTGTCCAAATTTAGAGCCGATGAAATT
GCACAGACATTAATTAATAATTCGGTAAATATGGATTTAATTGAAATACGGGGGCACGGGGGGCGCTACCCTATAGCGAG
CAATGATAGTGCCGAAGGGCGCGAAAAAAACAGGCGAGTATCTATCCGTTTGGTTAAGGCGAATGCAAAAACAAACAATC
TAAATTAG

Upstream 100 bases:

>100_bases
ACGATGAAGCGAGTCTGAAATTGAATGATTTTATGAGCGCATTGGAAGCAACCCAGAAAACATTTGCACAGATAAGTTCC
TTATCATTGTTTAAGCAGTT

Downstream 100 bases:

>100_bases
ACGATGGGGTTGATAGTGAAAGTATTAAAAATAGTTGTCTTTATCGATATGCTTCAAAGTTCGGTTAACTAAGAGAAATA
TAATGGCAGATAAAAACAAT

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: Polar flagellum motor protein [H]

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MSCSLKLFLTLLLLFTGGIAAIPIHYQGEMDNTTWKTELKFDRCEIYTEIPDWGFKVSFIAESGQSLQLLIYSRIHSAAA
IKESFAEVINAPWYELQASPQEQIMADSIGENSINFRQGVETIFQHMLAGSWLQFYSMSNTEVMYIVSLPTTSWQKETVS
FNQCANQLPVINYEEINQLSFNYIENQYKLNKTQTKDLVKLSDYINKDQSVVKILIDGHSDKYGNSSQNLRLSKFRADEI
AQTLINNSVNMDLIEIRGHGGRYPIASNDSAEGREKNRRVSIRLVKANAKTNNLN

Sequences:

>Translated_295_residues
MSCSLKLFLTLLLLFTGGIAAIPIHYQGEMDNTTWKTELKFDRCEIYTEIPDWGFKVSFIAESGQSLQLLIYSRIHSAAA
IKESFAEVINAPWYELQASPQEQIMADSIGENSINFRQGVETIFQHMLAGSWLQFYSMSNTEVMYIVSLPTTSWQKETVS
FNQCANQLPVINYEEINQLSFNYIENQYKLNKTQTKDLVKLSDYINKDQSVVKILIDGHSDKYGNSSQNLRLSKFRADEI
AQTLINNSVNMDLIEIRGHGGRYPIASNDSAEGREKNRRVSIRLVKANAKTNNLN
>Mature_294_residues
SCSLKLFLTLLLLFTGGIAAIPIHYQGEMDNTTWKTELKFDRCEIYTEIPDWGFKVSFIAESGQSLQLLIYSRIHSAAAI
KESFAEVINAPWYELQASPQEQIMADSIGENSINFRQGVETIFQHMLAGSWLQFYSMSNTEVMYIVSLPTTSWQKETVSF
NQCANQLPVINYEEINQLSFNYIENQYKLNKTQTKDLVKLSDYINKDQSVVKILIDGHSDKYGNSSQNLRLSKFRADEIA
QTLINNSVNMDLIEIRGHGGRYPIASNDSAEGREKNRRVSIRLVKANAKTNNLN

Specific function: Plays the role of a stator in the sodium flagellar motor, stabilizing the force-generating unit through direct interaction with the cell wall. Involved in adherence and invasion of fish cell line [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=67, Percent_Identity=46.2686567164179, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 33604; Mature: 33473

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCSLKLFLTLLLLFTGGIAAIPIHYQGEMDNTTWKTELKFDRCEIYTEIPDWGFKVSFI
CCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEEEEEEEEEEEEEEECCCCCEEEEEE
AESGQSLQLLIYSRIHSAAAIKESFAEVINAPWYELQASPQEQIMADSIGENSINFRQGV
ECCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCCCCHHHHHH
ETIFQHMLAGSWLQFYSMSNTEVMYIVSLPTTSWQKETVSFNQCANQLPVINYEEINQLS
HHHHHHHHHCCHHHEEECCCCEEEEEEECCCCCCCHHCCCHHHHHCCCCCCCHHHHHHHH
FNYIENQYKLNKTQTKDLVKLSDYINKDQSVVKILIDGHSDKYGNSSQNLRLSKFRADEI
HHHHHCCEECCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEEHHHHHHHH
AQTLINNSVNMDLIEIRGHGGRYPIASNDSAEGREKNRRVSIRLVKANAKTNNLN
HHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCC
>Mature Secondary Structure 
SCSLKLFLTLLLLFTGGIAAIPIHYQGEMDNTTWKTELKFDRCEIYTEIPDWGFKVSFI
CCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEEEEEEEEEEEEEEECCCCCEEEEEE
AESGQSLQLLIYSRIHSAAAIKESFAEVINAPWYELQASPQEQIMADSIGENSINFRQGV
ECCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCCCCHHHHHH
ETIFQHMLAGSWLQFYSMSNTEVMYIVSLPTTSWQKETVSFNQCANQLPVINYEEINQLS
HHHHHHHHHCCHHHEEECCCCEEEEEEECCCCCCCHHCCCHHHHHCCCCCCCHHHHHHHH
FNYIENQYKLNKTQTKDLVKLSDYINKDQSVVKILIDGHSDKYGNSSQNLRLSKFRADEI
HHHHHCCEECCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEEHHHHHHHH
AQTLINNSVNMDLIEIRGHGGRYPIASNDSAEGREKNRRVSIRLVKANAKTNNLN
HHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA