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The map label for this gene is ybaV [C]

Identifier: 119947072

GI number: 119947072

Start: 4290451

End: 4290765

Strand: Reverse

Name: ybaV [C]

Synonym: Ping_3470

Alternate gene names: 119947072

Gene position: 4290765-4290451 (Counterclockwise)

Preceding gene: 119947073

Following gene: 119947067

Centisome position: 94.1

GC content: 38.73

Gene sequence:

>315_bases
ATGAAATACAAACTAACCTACCGTTTATTAGCTATTTTTGCACTGCTTTTTCTGCCTTTTAGTCAGCAAGTTTGGGCTGC
GGAGAAAGTTGAGCAAAGCATACAAATGACATCCCAAGTTGTTGAAAAAATAAATATCAACCAAGCAACGAGCCAGCAAC
TTACGATCGTCAAAGGTATCGGTGAAAAAAAAGCACAGGCCATTATCGACTACAGAACAATGAACGGTGATTTTGCTGAT
CTAAACGAGTTAGTGAAAGTAAGAGGGATTGGCGACGCGACACTGAAAAAAATCCAACCTTTTTTTACGCTTTAA

Upstream 100 bases:

>100_bases
TAAAAAGTAAAATGACTAAAGTTAACATCATAAAAAATAAAAATAAGGAAAAATAATAGTCTAGTGTTATTGGTTACCTA
AACCACAAAAAAGGATTTTT

Downstream 100 bases:

>100_bases
TAATCAATAAAAAAATCAATAAAAAAAATGGAGCCTTTTATTTAGGCTCCATTTTTTATCCTATCCCATAAACCTCTGCT
AATATCACGGAACTGAGCCT

Product: helix-hairpin-helix repeat-containing competence protein ComEA

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MKYKLTYRLLAIFALLFLPFSQQVWAAEKVEQSIQMTSQVVEKININQATSQQLTIVKGIGEKKAQAIIDYRTMNGDFAD
LNELVKVRGIGDATLKKIQPFFTL

Sequences:

>Translated_104_residues
MKYKLTYRLLAIFALLFLPFSQQVWAAEKVEQSIQMTSQVVEKININQATSQQLTIVKGIGEKKAQAIIDYRTMNGDFAD
LNELVKVRGIGDATLKKIQPFFTL
>Mature_104_residues
MKYKLTYRLLAIFALLFLPFSQQVWAAEKVEQSIQMTSQVVEKININQATSQQLTIVKGIGEKKAQAIIDYRTMNGDFAD
LNELVKVRGIGDATLKKIQPFFTL

Specific function: Unknown

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11810; Mature: 11810

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKLTYRLLAIFALLFLPFSQQVWAAEKVEQSIQMTSQVVEKININQATSQQLTIVKGI
CCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC
GEKKAQAIIDYRTMNGDFADLNELVKVRGIGDATLKKIQPFFTL
CHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKYKLTYRLLAIFALLFLPFSQQVWAAEKVEQSIQMTSQVVEKININQATSQQLTIVKGI
CCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC
GEKKAQAIIDYRTMNGDFADLNELVKVRGIGDATLKKIQPFFTL
CHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA