Click here to switch to the map view.

The map label for this gene is 119947015

Identifier: 119947015

GI number: 119947015

Start: 4215446

End: 4216108

Strand: Reverse

Name: 119947015

Synonym: Ping_3412

Alternate gene names: NA

Gene position: 4216108-4215446 (Counterclockwise)

Preceding gene: 119947016

Following gene: 119947014

Centisome position: 92.47

GC content: 33.79

Gene sequence:

>663_bases
ATGAATTTAAAGCAACCATTTGTAATATATAGGGAAAATGAAAATAATACAGAAGGAACTGACTGGTTATTGATAAGTGA
CTTAATGTCGGGCTTATTAATGATTTTTGCTTTATTAGTGGTAGTAACTTTATTCCAATTAAAAATCACTCAGGAGCAGA
TACAAAACAAAAGGGTGATTGTTATTCAGGCATTACAGGAGCAATTTAACGCAAATGGAATCAGTGCTGAAATAAACCCT
GAAACTGGAGATATAACACTCCTTGATTCCGTGCTATTTGATTTTAATAAGAAACAATTAAAGCAAGAAGGAAAAGATTT
TTTAATAAAATTTATTCCTGTTTATAGTGGTGTGATTTTTTCTGAAGATGGCATCAGCGATGAAATTAACCGTGTCATTA
TCGAAGGGCATACAAGCTCAGATGGTTCTCTAGGTTATAACATGCAATTGAGTCTGGGGCGTGCTAACAGTGTTTTTCAG
TATATTCACTCTATGCCACATGAAAGCAACAAAGAGGCGTTTTTACAAAAAATCCAAGTTGCAGGAAGGGGACCTATGGA
TGCTAATTCACACCACTCTGAGCTGGAAGATAGAAAAGTGATATTTAGAATGCAATTCAAATCAGAAGATGCTTTCAGTA
AAGTATTAAAGTTGAAAAAGTAA

Upstream 100 bases:

>100_bases
CCTCAGCGAAAATTCATACTCGCTTACTACAATCAGCAGAATATCTTATATCGGCAGAAACTCAGCGCAAAAGTATCTCG
AATAATGGGAAGGTTCAATA

Downstream 100 bases:

>100_bases
GCATGGGGGAATTATTTAAAATAAACCAGCCAAAGCGTATTAAACCAGTCGCTATGATGGAGGCAGCTTTTTCTATAGAT
AATTGTAGTAATGAAAGTAT

Product: Outer membrane protein and related peptidoglycan-associated (lipo)proteins-like protein

Products: NA

Alternate protein names: OmpA/MotB Domain Protein; Ompa/Motb Domain Protein; Outer Membrane Protein Peptidoglycan-Associatedprotein; OmpA Family Protein; Periplasmic Protein

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MNLKQPFVIYRENENNTEGTDWLLISDLMSGLLMIFALLVVVTLFQLKITQEQIQNKRVIVIQALQEQFNANGISAEINP
ETGDITLLDSVLFDFNKKQLKQEGKDFLIKFIPVYSGVIFSEDGISDEINRVIIEGHTSSDGSLGYNMQLSLGRANSVFQ
YIHSMPHESNKEAFLQKIQVAGRGPMDANSHHSELEDRKVIFRMQFKSEDAFSKVLKLKK

Sequences:

>Translated_220_residues
MNLKQPFVIYRENENNTEGTDWLLISDLMSGLLMIFALLVVVTLFQLKITQEQIQNKRVIVIQALQEQFNANGISAEINP
ETGDITLLDSVLFDFNKKQLKQEGKDFLIKFIPVYSGVIFSEDGISDEINRVIIEGHTSSDGSLGYNMQLSLGRANSVFQ
YIHSMPHESNKEAFLQKIQVAGRGPMDANSHHSELEDRKVIFRMQFKSEDAFSKVLKLKK
>Mature_220_residues
MNLKQPFVIYRENENNTEGTDWLLISDLMSGLLMIFALLVVVTLFQLKITQEQIQNKRVIVIQALQEQFNANGISAEINP
ETGDITLLDSVLFDFNKKQLKQEGKDFLIKFIPVYSGVIFSEDGISDEINRVIIEGHTSSDGSLGYNMQLSLGRANSVFQ
YIHSMPHESNKEAFLQKIQVAGRGPMDANSHHSELEDRKVIFRMQFKSEDAFSKVLKLKK

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25028; Mature: 25028

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKQPFVIYRENENNTEGTDWLLISDLMSGLLMIFALLVVVTLFQLKITQEQIQNKRVI
CCCCCCEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VIQALQEQFNANGISAEINPETGDITLLDSVLFDFNKKQLKQEGKDFLIKFIPVYSGVIF
EEEHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHCCEEE
SEDGISDEINRVIIEGHTSSDGSLGYNMQLSLGRANSVFQYIHSMPHESNKEAFLQKIQV
CCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHH
AGRGPMDANSHHSELEDRKVIFRMQFKSEDAFSKVLKLKK
CCCCCCCCCCCHHHHHHHEEEEEEECCCCHHHHHHHHCCC
>Mature Secondary Structure
MNLKQPFVIYRENENNTEGTDWLLISDLMSGLLMIFALLVVVTLFQLKITQEQIQNKRVI
CCCCCCEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VIQALQEQFNANGISAEINPETGDITLLDSVLFDFNKKQLKQEGKDFLIKFIPVYSGVIF
EEEHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHCCEEE
SEDGISDEINRVIIEGHTSSDGSLGYNMQLSLGRANSVFQYIHSMPHESNKEAFLQKIQV
CCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHH
AGRGPMDANSHHSELEDRKVIFRMQFKSEDAFSKVLKLKK
CCCCCCCCCCCHHHHHHHEEEEEEECCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA