Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119947009
Identifier: 119947009
GI number: 119947009
Start: 4206974
End: 4207393
Strand: Reverse
Name: 119947009
Synonym: Ping_3406
Alternate gene names: NA
Gene position: 4207393-4206974 (Counterclockwise)
Preceding gene: 119947014
Following gene: 119947008
Centisome position: 92.28
GC content: 40.48
Gene sequence:
>420_bases ATGAAAAGATTAATCATGATTTTCATCTGTACGGTAGGCTTATTAACAGCAGCGATGTCAGTAAATGCAGCAAATGCAGC TAAAGTTGGCTTTGGTTTTGACCAGGGATTTGGTGTTGCAGGGCAGTTTAATAATCTCAATGGATTTGTTGGTAATGATG GTATTAGTGGCGATTATTTGCTCAAGCAAGGTACATTTGCCAACGATCTTTCATTTAATTATTATATGGGTGGGGGGGCA TTTTATAAATGGCATCATGATGATATTTTTGGTCTACGCGCGCCACTTGGCCTCACTCTGCCTTTTGCGCCGCAATTTGA TGTATTTGCACAGATCTCTCCGAATGTAGGCTACAAAGAAAACAAAGAGGAATTACGTTTTGCTTTAAGCGCCGCGATAG GTGTACGTTATGCGTTCTAA
Upstream 100 bases:
>100_bases ACTGCTCAAAAATTCTGTAAGGGTGACGAGATAAACAAGATCCTGAATTCAATCTGTTTACAGTAGAATAAAAATTAAAC ATTTTTAATGGGAAATAACA
Downstream 100 bases:
>100_bases CTAAGTGCAAGGTATGTCTATGCAGTTTAGTCATATACAGCTTAATCATAAGCATTAAAAATGGGCTGTGAAATAGCGGT TTACACTGATAATCGCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MKRLIMIFICTVGLLTAAMSVNAANAAKVGFGFDQGFGVAGQFNNLNGFVGNDGISGDYLLKQGTFANDLSFNYYMGGGA FYKWHHDDIFGLRAPLGLTLPFAPQFDVFAQISPNVGYKENKEELRFALSAAIGVRYAF
Sequences:
>Translated_139_residues MKRLIMIFICTVGLLTAAMSVNAANAAKVGFGFDQGFGVAGQFNNLNGFVGNDGISGDYLLKQGTFANDLSFNYYMGGGA FYKWHHDDIFGLRAPLGLTLPFAPQFDVFAQISPNVGYKENKEELRFALSAAIGVRYAF >Mature_139_residues MKRLIMIFICTVGLLTAAMSVNAANAAKVGFGFDQGFGVAGQFNNLNGFVGNDGISGDYLLKQGTFANDLSFNYYMGGGA FYKWHHDDIFGLRAPLGLTLPFAPQFDVFAQISPNVGYKENKEELRFALSAAIGVRYAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15110; Mature: 15110
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLIMIFICTVGLLTAAMSVNAANAAKVGFGFDQGFGVAGQFNNLNGFVGNDGISGDYL CCCEEHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEECCCCCCEECCCCCCCCEE LKQGTFANDLSFNYYMGGGAFYKWHHDDIFGLRAPLGLTLPFAPQFDVFAQISPNVGYKE EECCCCCCCCEEEEEECCCEEEEEECCCEEEECCCCCEECCCCCCCCEEEEECCCCCCCC NKEELRFALSAAIGVRYAF CHHHHHHHHHHHHEEEECC >Mature Secondary Structure MKRLIMIFICTVGLLTAAMSVNAANAAKVGFGFDQGFGVAGQFNNLNGFVGNDGISGDYL CCCEEHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEECCCCCCEECCCCCCCCEE LKQGTFANDLSFNYYMGGGAFYKWHHDDIFGLRAPLGLTLPFAPQFDVFAQISPNVGYKE EECCCCCCCCEEEEEECCCEEEEEECCCEEEECCCCCEECCCCCCCCEEEEECCCCCCCC NKEELRFALSAAIGVRYAF CHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA