Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119946992
Identifier: 119946992
GI number: 119946992
Start: 4185723
End: 4186295
Strand: Reverse
Name: 119946992
Synonym: Ping_3387
Alternate gene names: NA
Gene position: 4186295-4185723 (Counterclockwise)
Preceding gene: 119946994
Following gene: 119946990
Centisome position: 91.81
GC content: 41.54
Gene sequence:
>573_bases ATGCAACTGTCATTATTGACTCAACCTATTTACGACCACTTATATGCTGATATCGAGCAGTTCCGTCAGACTTTTGATCT TCCCTGTAATGATCTTAGTTCATTAGACGTACAAGCGGACGCCCTGCATACTTCGTTAATTATTGAAGAATTAACGGAAT TGGCCCAGGCCGATTGTAAAATTGAACAAGCTGATGCGATTGTGGACAGTATTTATGTTCTGATGGGACGCTTAGTCCAC CGGGGCATAACCGGGGCGAGTGATCATATTGAGATCAGCTATTTGATTGATCTTTTTTTAAATGTCGCCAAACAGCTTAA GATTAATTTTTTACCTTGTTGGGACGAAGTGCATTCAAGCAATATGAGCAAAGTCTGCCGCAGCGCCCAAGAATATCAAG AAACCGAGCAATTTTATGCGGATCAGGGAATTGAATTGGTTGATAGCATTAAGGGGAATTTTATTATCGCCAAATGCGCA CAGGATGTGCAATTGTCGGATAAGAAAATACGTCAAGGTAAGGTCTTAAAGTCTGTTTATTACCGCCCGGCTGATTTAGC GCCGCTGGTTTAA
Upstream 100 bases:
>100_bases GCTAACTGATCCACTTGTGATCAGTTTTGCACGCTGAAATGCTCTCTTTTTTAACATTTTATTGCTACAATCGATGGTTT ATGAGATTAGGGTTTAACGT
Downstream 100 bases:
>100_bases AATAATACCCAAAAAGGGTGAAGAGATTAGCGTTGATAACAGCAATCTTTTCACCCTCTTTATTCACAGCTTATGGCTAT TTTTATTAACTGGCGCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MQLSLLTQPIYDHLYADIEQFRQTFDLPCNDLSSLDVQADALHTSLIIEELTELAQADCKIEQADAIVDSIYVLMGRLVH RGITGASDHIEISYLIDLFLNVAKQLKINFLPCWDEVHSSNMSKVCRSAQEYQETEQFYADQGIELVDSIKGNFIIAKCA QDVQLSDKKIRQGKVLKSVYYRPADLAPLV
Sequences:
>Translated_190_residues MQLSLLTQPIYDHLYADIEQFRQTFDLPCNDLSSLDVQADALHTSLIIEELTELAQADCKIEQADAIVDSIYVLMGRLVH RGITGASDHIEISYLIDLFLNVAKQLKINFLPCWDEVHSSNMSKVCRSAQEYQETEQFYADQGIELVDSIKGNFIIAKCA QDVQLSDKKIRQGKVLKSVYYRPADLAPLV >Mature_190_residues MQLSLLTQPIYDHLYADIEQFRQTFDLPCNDLSSLDVQADALHTSLIIEELTELAQADCKIEQADAIVDSIYVLMGRLVH RGITGASDHIEISYLIDLFLNVAKQLKINFLPCWDEVHSSNMSKVCRSAQEYQETEQFYADQGIELVDSIKGNFIIAKCA QDVQLSDKKIRQGKVLKSVYYRPADLAPLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21512; Mature: 21512
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLSLLTQPIYDHLYADIEQFRQTFDLPCNDLSSLDVQADALHTSLIIEELTELAQADCK CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC IEQADAIVDSIYVLMGRLVHRGITGASDHIEISYLIDLFLNVAKQLKINFLPCWDEVHSS HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCC NMSKVCRSAQEYQETEQFYADQGIELVDSIKGNFIIAKCAQDVQLSDKKIRQGKVLKSVY CHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH YRPADLAPLV CCCCCCCCCC >Mature Secondary Structure MQLSLLTQPIYDHLYADIEQFRQTFDLPCNDLSSLDVQADALHTSLIIEELTELAQADCK CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC IEQADAIVDSIYVLMGRLVHRGITGASDHIEISYLIDLFLNVAKQLKINFLPCWDEVHSS HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCC NMSKVCRSAQEYQETEQFYADQGIELVDSIKGNFIIAKCAQDVQLSDKKIRQGKVLKSVY CHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH YRPADLAPLV CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA