Click here to switch to the map view.

The map label for this gene is icc [H]

Identifier: 119946963

GI number: 119946963

Start: 4150007

End: 4150843

Strand: Reverse

Name: icc [H]

Synonym: Ping_3358

Alternate gene names: 119946963

Gene position: 4150843-4150007 (Counterclockwise)

Preceding gene: 119946964

Following gene: 119946962

Centisome position: 91.04

GC content: 41.22

Gene sequence:

>837_bases
ATGAAAGTTATGAGCACACAAGCCACAAAATTAAGATCAGACCAGCAGGGTTGTTTACAACTTCTGCAAATCACCGATAC
CCATCTTTTTTCCGATCGGAATAAAGACTTGCTTGGTATTAAACCAGCTGAAAGTTATGAAGCTGTGATTAAACACGCCT
CTCGTTACTCATCCAAGTGTCAGGCAGTTTTATCAACGGGAGATCTATCTCAAGATCATACCCAGCAATCTTACCTTGAT
TTTACCAAGCAGATAAAAACCTTGAATTTACCCTGTTACTGGTTGCCCGGCAATCATGATACGCAATCGGTGATGTTGCC
CAGTCTTTTGCAGGAGGGCCTCGCGCAGAGCAAACAAATTGTTAGCGATTTTTGGCAAATTATTTTACTGGATTCACAAG
TTGAAGGTGCGCCCCATGGGTTTTTAACGGAGCAGCAACTGAATTTTTTACAGCAAGCTTTGACTGAATATCCCGATAAA
CATACTCTGATTTGTGTGCACCATCATGTTTTACCGGTTAAATCAGCCTGGTTAGATCAGCATATTCTAAAAAATAATCA
GCAATTTTTAGAACTCATCAAGTTGCATAAAAATGTACGTGTGGTGCTGTCCGGGCATGTTCATCAGGCGGGTGATATCG
AATTTAATCAGGTGCGATTTTTAACCAGCCCATCTACCTGCTTACAGTTTAAGCCCAATTCTGAGGATTTTGATGTTGAT
GATAGTGCGCCCGGTTACCGCTATTTAGCGTTGCATAAAAATGGTACTATTACGACCAAAGTTGAGCGCGTAGCGCATGG
AGAATTTTCCCCCAATAAAAACGCAACAGGTTATTAA

Upstream 100 bases:

>100_bases
ATATTAAGGTCAGATCATGTGCGTTAACAAATATTGCAATCATTAACTCTAGGTCAAATTATGAACATTAACCAATATTG
CAATATCCATTAATCTACGA

Downstream 100 bases:

>100_bases
TGCAGAAAATTTTATTATCCCTACACGGTTATCATAGTTCTCCCGGATCCTTAAAAGCGCGATTAATGTCTTCTTATTTA
GCTGAGCACTTCCCTGAAAT

Product: cyclic AMP phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MKVMSTQATKLRSDQQGCLQLLQITDTHLFSDRNKDLLGIKPAESYEAVIKHASRYSSKCQAVLSTGDLSQDHTQQSYLD
FTKQIKTLNLPCYWLPGNHDTQSVMLPSLLQEGLAQSKQIVSDFWQIILLDSQVEGAPHGFLTEQQLNFLQQALTEYPDK
HTLICVHHHVLPVKSAWLDQHILKNNQQFLELIKLHKNVRVVLSGHVHQAGDIEFNQVRFLTSPSTCLQFKPNSEDFDVD
DSAPGYRYLALHKNGTITTKVERVAHGEFSPNKNATGY

Sequences:

>Translated_278_residues
MKVMSTQATKLRSDQQGCLQLLQITDTHLFSDRNKDLLGIKPAESYEAVIKHASRYSSKCQAVLSTGDLSQDHTQQSYLD
FTKQIKTLNLPCYWLPGNHDTQSVMLPSLLQEGLAQSKQIVSDFWQIILLDSQVEGAPHGFLTEQQLNFLQQALTEYPDK
HTLICVHHHVLPVKSAWLDQHILKNNQQFLELIKLHKNVRVVLSGHVHQAGDIEFNQVRFLTSPSTCLQFKPNSEDFDVD
DSAPGYRYLALHKNGTITTKVERVAHGEFSPNKNATGY
>Mature_278_residues
MKVMSTQATKLRSDQQGCLQLLQITDTHLFSDRNKDLLGIKPAESYEAVIKHASRYSSKCQAVLSTGDLSQDHTQQSYLD
FTKQIKTLNLPCYWLPGNHDTQSVMLPSLLQEGLAQSKQIVSDFWQIILLDSQVEGAPHGFLTEQQLNFLQQALTEYPDK
HTLICVHHHVLPVKSAWLDQHILKNNQQFLELIKLHKNVRVVLSGHVHQAGDIEFNQVRFLTSPSTCLQFKPNSEDFDVD
DSAPGYRYLALHKNGTITTKVERVAHGEFSPNKNATGY

Specific function: Affects The Expression Of The Lacz Gene. [C]

COG id: COG1409

COG function: function code R; Predicted phosphohydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli icc [H]

Homologues:

Organism=Escherichia coli, GI1789410, Length=261, Percent_Identity=43.2950191570881, Blast_Score=228, Evalue=4e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013622
- InterPro:   IPR004843
- ProDom:   PD587589 [H]

Pfam domain/function: PF00149 Metallophos; PF08413 Metallophos_C [H]

EC number: NA

Molecular weight: Translated: 31490; Mature: 31490

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVMSTQATKLRSDQQGCLQLLQITDTHLFSDRNKDLLGIKPAESYEAVIKHASRYSSKC
CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHH
QAVLSTGDLSQDHTQQSYLDFTKQIKTLNLPCYWLPGNHDTQSVMLPSLLQEGLAQSKQI
HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHH
VSDFWQIILLDSQVEGAPHGFLTEQQLNFLQQALTEYPDKHTLICVHHHVLPVKSAWLDQ
HHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
HILKNNQQFLELIKLHKNVRVVLSGHVHQAGDIEFNQVRFLTSPSTCLQFKPNSEDFDVD
HHHHCCHHHHHHHHHCCCEEEEEECCCCCCCCCEEHEEEEEECCCCEEEECCCCCCCCCC
DSAPGYRYLALHKNGTITTKVERVAHGEFSPNKNATGY
CCCCCEEEEEEECCCCEEEHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKVMSTQATKLRSDQQGCLQLLQITDTHLFSDRNKDLLGIKPAESYEAVIKHASRYSSKC
CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHH
QAVLSTGDLSQDHTQQSYLDFTKQIKTLNLPCYWLPGNHDTQSVMLPSLLQEGLAQSKQI
HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHH
VSDFWQIILLDSQVEGAPHGFLTEQQLNFLQQALTEYPDKHTLICVHHHVLPVKSAWLDQ
HHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
HILKNNQQFLELIKLHKNVRVVLSGHVHQAGDIEFNQVRFLTSPSTCLQFKPNSEDFDVD
HHHHCCHHHHHHHHHCCCEEEEEECCCCCCCCCEEHEEEEEECCCCEEEECCCCCCCCCC
DSAPGYRYLALHKNGTITTKVERVAHGEFSPNKNATGY
CCCCCEEEEEEECCCCEEEHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]