Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119946854
Identifier: 119946854
GI number: 119946854
Start: 4007350
End: 4009599
Strand: Reverse
Name: 119946854
Synonym: Ping_3248
Alternate gene names: NA
Gene position: 4009599-4007350 (Counterclockwise)
Preceding gene: 119946855
Following gene: 119946849
Centisome position: 87.94
GC content: 44.09
Gene sequence:
>2250_bases ATGAAACAAAAAGGATTTGTACTGGTATCCGTGCTTATTATTACGACCATCACAACTATGCTGGCATTTTCGCAACTCAA AACTAATAGTCTGCAAGAACGGATGGCCGGCAATCAACAAAAAGAAATCAATGCGCGGTTGGCTGCAGAAAAAGGTATTT TTAAAGGTTTTGACGATATTAAGTCGGGAGGTACAACTGAGCAGATGCTTAGCGACTTAAACGATTTTGCGTCTGATGAA GATAAAGATTACTCTTTTAGTTCACTCGATTCTTATGGCAATAATCTTTTTGCCTTGGTAAGTACAGGAAAATTTGGCGG TGCCACTGCTCATTTAAAAGCAGTAATAAAAAGTCCAGAAGGAGATGCAATCATTGCTTGTGAGAGTGTAAATGTGTCGG GAAATGGATCCATTGAAGGCGATGTAACTGTTATCGAAGGGAATGCTACTTTTAGCGGAAATGGATCTATTGCAGGGTAT GTTACGGCTTCTGGTAGTGTAACTGGGGTACCGGAAGATTATTACAGCGTAATATCAAGGGCAGAGCTTGGTGAATGTAA TCCGCTTGGTATTACTGGTGAAATAGCTGATATGGCAACTCAGGTGACCATCACTCCTAATGATTATGCTACAAGTACAT ATACTAGTTTTGACGGTGTGAATGCTGCTGGAGGGGTTGCTCCTGTAGCACTCGATGTTTTAGGTCAAAGTAAAAACGTT TACGTTTTTAATAACTTTAATACCGGGCAGGGGGCGCAAAAAGAAGTGGTAATAACGGGTGATGTAACCCTTTATATAAA AAATAATATGACCACAAAAAACACAATATTTACTCTCGCAGATAATAGTTCATTAACTATCTTTATCGAAGGAAAGATGG ATATTGAGACAGGCTCTGATATTTTTTCCGATCAGTCTGTCAGTGCTCATGGCAAAGCCCCGTTAACAGTATACTCCTCT AATAACACTTATGATGCGGTGACGCTTAGTGGTAACGGCGAGATTTATATGAACCTTTATGCGCCTTTGGGAACCATTGC TTACAATGGCAATGGAAATATTATGGGAGCGCTACGTGGAGAAGTTGTTGATATTTCCGGAGGTGGGGACATACATTACG ATCAAGGTCTTGGCGAACCAGCCTCATACTGTGCTATTTATTATTACTATCCGGAAAATCCCGGTACCGTGGAGACTTTG GAAGCTGAGGACTACAGGGTCTACTGCGGCGATGATCTTGATATATCCCCGTTTATATCCCCGTTTCAATCCTATGCTGC AATAGCCGGTGGCTATATAAGTATAGCCGCAAACTCCACAGTAAACGGTGATCTCGCTGCACAAGGGTACGTTAGTATCT ATGATAATTCTGTAGTTCACAACATCTATGCTGGCGGTTATGTGAGCACAGCTAATCCGTCTACCGTTGAAAACATCTAT GCTGGCGATTATGTGACCATAGGTGCTAACGCTATTGCCCAAAACATCCATGCCGGAGCCGCCATTACCGTATACGCGAA TGGTGATGTCCAGGCGGTCTATGCTGGCGCAGCCATCACCTTGAGCGCGGGCGCTTCGACGAATGGCGTTTTAGCTGAGG ATGCCAACTCAGATGACTATGTTGAAGCGGGCGATATACATAATGCTGGTAATATGACAGAAATGATAACGCTGATAACG GAGACACAGTCCGCTTTATCTGACCTCGTGCTATCCCCTTCTAATGGACAATTACCACCTCCCACTATGGGAACACGCAC GTTAGCGCCTGGTGTATGGGAAGAAGACAGTGCCCTGAGTATAACTGCAAGCTCAACCATTACCTTTGATGCGGATAAGT TTACTGATAATGAGGACCATGTTTGGGTTATTAACCTTAGTGGGGCGCTGAAGGTTAGTGATTCGACTAATATCAAGATA ATTGGTTTGGATAAAGGCGATACCGCTACTATCATTTGGAATGTAGGCACTGCGCTCGATCTCGTTGCTGACACTTCTTT GGATGACACCGATACCGCTACTATCATTTGGAATGTAGGCACTGCGCTCACCATGGGTGCTCGCACCTCTTTCCGTGGCA CCGCATTTGTAGGGGGACCCATTACCGCGGCGACTTCATCGGTTAGTTGTGGTCACTTGTATGCAACGGGCCTCATTAGT ATCGGTAGCATCGGGGTCGATAGTGCAGGTAGTCCAGTCACTTGCGAAAATTCAGATGCTGTCTTCACTTATCTGGAGAC ACTCAATTAA
Upstream 100 bases:
>100_bases TGTTGTATCCATTGCCGGATAAAAATAATTAGCCAAGTATTTTTATCCCTATTCAAGTTATGTGCCTGTTATTTGAATCT AAAAAATTAAAGAGGGAAGT
Downstream 100 bases:
>100_bases TTAGCCGTAATTACGCACCGTAATACGTGCAATTTCTCAGGGTAAATGGTCGACTGTTATAGTTAGGCCATTTTTTTTGC CCAATAAAAGTAATAAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 749; Mature: 749
Protein sequence:
>749_residues MKQKGFVLVSVLIITTITTMLAFSQLKTNSLQERMAGNQQKEINARLAAEKGIFKGFDDIKSGGTTEQMLSDLNDFASDE DKDYSFSSLDSYGNNLFALVSTGKFGGATAHLKAVIKSPEGDAIIACESVNVSGNGSIEGDVTVIEGNATFSGNGSIAGY VTASGSVTGVPEDYYSVISRAELGECNPLGITGEIADMATQVTITPNDYATSTYTSFDGVNAAGGVAPVALDVLGQSKNV YVFNNFNTGQGAQKEVVITGDVTLYIKNNMTTKNTIFTLADNSSLTIFIEGKMDIETGSDIFSDQSVSAHGKAPLTVYSS NNTYDAVTLSGNGEIYMNLYAPLGTIAYNGNGNIMGALRGEVVDISGGGDIHYDQGLGEPASYCAIYYYYPENPGTVETL EAEDYRVYCGDDLDISPFISPFQSYAAIAGGYISIAANSTVNGDLAAQGYVSIYDNSVVHNIYAGGYVSTANPSTVENIY AGDYVTIGANAIAQNIHAGAAITVYANGDVQAVYAGAAITLSAGASTNGVLAEDANSDDYVEAGDIHNAGNMTEMITLIT ETQSALSDLVLSPSNGQLPPPTMGTRTLAPGVWEEDSALSITASSTITFDADKFTDNEDHVWVINLSGALKVSDSTNIKI IGLDKGDTATIIWNVGTALDLVADTSLDDTDTATIIWNVGTALTMGARTSFRGTAFVGGPITAATSSVSCGHLYATGLIS IGSIGVDSAGSPVTCENSDAVFTYLETLN
Sequences:
>Translated_749_residues MKQKGFVLVSVLIITTITTMLAFSQLKTNSLQERMAGNQQKEINARLAAEKGIFKGFDDIKSGGTTEQMLSDLNDFASDE DKDYSFSSLDSYGNNLFALVSTGKFGGATAHLKAVIKSPEGDAIIACESVNVSGNGSIEGDVTVIEGNATFSGNGSIAGY VTASGSVTGVPEDYYSVISRAELGECNPLGITGEIADMATQVTITPNDYATSTYTSFDGVNAAGGVAPVALDVLGQSKNV YVFNNFNTGQGAQKEVVITGDVTLYIKNNMTTKNTIFTLADNSSLTIFIEGKMDIETGSDIFSDQSVSAHGKAPLTVYSS NNTYDAVTLSGNGEIYMNLYAPLGTIAYNGNGNIMGALRGEVVDISGGGDIHYDQGLGEPASYCAIYYYYPENPGTVETL EAEDYRVYCGDDLDISPFISPFQSYAAIAGGYISIAANSTVNGDLAAQGYVSIYDNSVVHNIYAGGYVSTANPSTVENIY AGDYVTIGANAIAQNIHAGAAITVYANGDVQAVYAGAAITLSAGASTNGVLAEDANSDDYVEAGDIHNAGNMTEMITLIT ETQSALSDLVLSPSNGQLPPPTMGTRTLAPGVWEEDSALSITASSTITFDADKFTDNEDHVWVINLSGALKVSDSTNIKI IGLDKGDTATIIWNVGTALDLVADTSLDDTDTATIIWNVGTALTMGARTSFRGTAFVGGPITAATSSVSCGHLYATGLIS IGSIGVDSAGSPVTCENSDAVFTYLETLN >Mature_749_residues MKQKGFVLVSVLIITTITTMLAFSQLKTNSLQERMAGNQQKEINARLAAEKGIFKGFDDIKSGGTTEQMLSDLNDFASDE DKDYSFSSLDSYGNNLFALVSTGKFGGATAHLKAVIKSPEGDAIIACESVNVSGNGSIEGDVTVIEGNATFSGNGSIAGY VTASGSVTGVPEDYYSVISRAELGECNPLGITGEIADMATQVTITPNDYATSTYTSFDGVNAAGGVAPVALDVLGQSKNV YVFNNFNTGQGAQKEVVITGDVTLYIKNNMTTKNTIFTLADNSSLTIFIEGKMDIETGSDIFSDQSVSAHGKAPLTVYSS NNTYDAVTLSGNGEIYMNLYAPLGTIAYNGNGNIMGALRGEVVDISGGGDIHYDQGLGEPASYCAIYYYYPENPGTVETL EAEDYRVYCGDDLDISPFISPFQSYAAIAGGYISIAANSTVNGDLAAQGYVSIYDNSVVHNIYAGGYVSTANPSTVENIY AGDYVTIGANAIAQNIHAGAAITVYANGDVQAVYAGAAITLSAGASTNGVLAEDANSDDYVEAGDIHNAGNMTEMITLIT ETQSALSDLVLSPSNGQLPPPTMGTRTLAPGVWEEDSALSITASSTITFDADKFTDNEDHVWVINLSGALKVSDSTNIKI IGLDKGDTATIIWNVGTALDLVADTSLDDTDTATIIWNVGTALTMGARTSFRGTAFVGGPITAATSSVSCGHLYATGLIS IGSIGVDSAGSPVTCENSDAVFTYLETLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78057; Mature: 78057
Theoretical pI: Translated: 3.87; Mature: 3.87
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQKGFVLVSVLIITTITTMLAFSQLKTNSLQERMAGNQQKEINARLAAEKGIFKGFDDI CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHH KSGGTTEQMLSDLNDFASDEDKDYSFSSLDSYGNNLFALVSTGKFGGATAHLKAVIKSPE HCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEECCC GDAIIACESVNVSGNGSIEGDVTVIEGNATFSGNGSIAGYVTASGSVTGVPEDYYSVISR CCEEEEEEEEECCCCCCCCCEEEEEECCEEECCCCCEEEEEEECCCEECCCHHHHHHHHH AELGECNPLGITGEIADMATQVTITPNDYATSTYTSFDGVNAAGGVAPVALDVLGQSKNV CCCCCCCCCCCCCCHHHCEEEEEECCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCE YVFNNFNTGQGAQKEVVITGDVTLYIKNNMTTKNTIFTLADNSSLTIFIEGKMDIETGSD EEEECCCCCCCCCEEEEEECCEEEEEECCCCCCCEEEEEECCCEEEEEEECEEEECCCCC IFSDQSVSAHGKAPLTVYSSNNTYDAVTLSGNGEIYMNLYAPLGTIAYNGNGNIMGALRG CCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCEEEEECCCCCEEEEECC EVVDISGGGDIHYDQGLGEPASYCAIYYYYPENPGTVETLEAEDYRVYCGDDLDISPFIS EEEEECCCCCEEECCCCCCCCCEEEEEEEECCCCCEEEEEECCCEEEEECCCCCCCHHHH PFQSYAAIAGGYISIAANSTVNGDLAAQGYVSIYDNSVVHNIYAGGYVSTANPSTVENIY HHHHHHHHCCCEEEEEECCCCCCCEEECCEEEEECCCEEEEEEECCEEECCCCCHHHHEE AGDYVTIGANAIAQNIHAGAAITVYANGDVQAVYAGAAITLSAGASTNGVLAEDANSDDY CCCEEEECCHHHHHHCCCCEEEEEEECCCEEEEEECEEEEEECCCCCCCEEEECCCCCCC VEAGDIHNAGNMTEMITLITETQSALSDLVLSPSNGQLPPPTMGTRTLAPGVWEEDSALS EECCCCCCCCCHHHEEEEEHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEE ITASSTITFDADKFTDNEDHVWVINLSGALKVSDSTNIKIIGLDKGDTATIIWNVGTALD EEECCEEEEECHHCCCCCCCEEEEEECCEEEECCCCCEEEEEECCCCEEEEEEECCCEEE LVADTSLDDTDTATIIWNVGTALTMGARTSFRGTAFVGGPITAATSSVSCGHLYATGLIS EEECCCCCCCCCEEEEEECCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEEECEEE IGSIGVDSAGSPVTCENSDAVFTYLETLN ECCCCCCCCCCCEEECCCCEEEEEEEECC >Mature Secondary Structure MKQKGFVLVSVLIITTITTMLAFSQLKTNSLQERMAGNQQKEINARLAAEKGIFKGFDDI CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHH KSGGTTEQMLSDLNDFASDEDKDYSFSSLDSYGNNLFALVSTGKFGGATAHLKAVIKSPE HCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEECCC GDAIIACESVNVSGNGSIEGDVTVIEGNATFSGNGSIAGYVTASGSVTGVPEDYYSVISR CCEEEEEEEEECCCCCCCCCEEEEEECCEEECCCCCEEEEEEECCCEECCCHHHHHHHHH AELGECNPLGITGEIADMATQVTITPNDYATSTYTSFDGVNAAGGVAPVALDVLGQSKNV CCCCCCCCCCCCCCHHHCEEEEEECCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCE YVFNNFNTGQGAQKEVVITGDVTLYIKNNMTTKNTIFTLADNSSLTIFIEGKMDIETGSD EEEECCCCCCCCCEEEEEECCEEEEEECCCCCCCEEEEEECCCEEEEEEECEEEECCCCC IFSDQSVSAHGKAPLTVYSSNNTYDAVTLSGNGEIYMNLYAPLGTIAYNGNGNIMGALRG CCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCEEEEECCCCCEEEEECC EVVDISGGGDIHYDQGLGEPASYCAIYYYYPENPGTVETLEAEDYRVYCGDDLDISPFIS EEEEECCCCCEEECCCCCCCCCEEEEEEEECCCCCEEEEEECCCEEEEECCCCCCCHHHH PFQSYAAIAGGYISIAANSTVNGDLAAQGYVSIYDNSVVHNIYAGGYVSTANPSTVENIY HHHHHHHHCCCEEEEEECCCCCCCEEECCEEEEECCCEEEEEEECCEEECCCCCHHHHEE AGDYVTIGANAIAQNIHAGAAITVYANGDVQAVYAGAAITLSAGASTNGVLAEDANSDDY CCCEEEECCHHHHHHCCCCEEEEEEECCCEEEEEECEEEEEECCCCCCCEEEECCCCCCC VEAGDIHNAGNMTEMITLITETQSALSDLVLSPSNGQLPPPTMGTRTLAPGVWEEDSALS EECCCCCCCCCHHHEEEEEHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEE ITASSTITFDADKFTDNEDHVWVINLSGALKVSDSTNIKIIGLDKGDTATIIWNVGTALD EEECCEEEEECHHCCCCCCCEEEEEECCEEEECCCCCEEEEEECCCCEEEEEEECCCEEE LVADTSLDDTDTATIIWNVGTALTMGARTSFRGTAFVGGPITAATSSVSCGHLYATGLIS EEECCCCCCCCCEEEEEECCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEEECEEE IGSIGVDSAGSPVTCENSDAVFTYLETLN ECCCCCCCCCCCEEECCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA