Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119946793
Identifier: 119946793
GI number: 119946793
Start: 3934575
End: 3935690
Strand: Reverse
Name: 119946793
Synonym: Ping_3186
Alternate gene names: NA
Gene position: 3935690-3934575 (Counterclockwise)
Preceding gene: 119946794
Following gene: 119946792
Centisome position: 86.32
GC content: 36.11
Gene sequence:
>1116_bases ATGAAAATGCCCAACGCAGTCGATAAATTTAGAGATATTCGCCCTTATAACGATGATGAAATTCAACCCGCCATTCAACG CGTTATTAAAAATGATGAATTTATTAATGCCATTATCTGCTTCCGTTTTTCTAAAATTGCCAAATTTATGGGGTTTTTAT TAACACCTTTATTACGCCGTTATTTTTTATATAAATGGGGCGGGATTAATAGCATTGATGAGATGCAAAAAGTGGTTGGC GGTTATATGGAACATATGATCGCATCAACAACAACTGGCTTCACCTATTCTGGTCTTGATAAAATTGATCCGACCAAAAA TTATCTTTTTGTTTCAAATCATAGAGATATTGCAATGGATCCGGCCTTTGTAAATTGGGCTCTATATTCTGAAAATTTTA AAACCGTGCGTGTTGCTATTGGTGATAATCTCTTAAGCAAACCCTATGTTTCCGATTTGATGCGCATGAATAAAAGTTTT ATTGTGCAGCGTTCTGTCTCGGGTATACGTGAAATGATGAAATCACTGGGGCAGTTATCTGATTATATTTTTAGCTCTTT ACAGGGCGAAAGTAATATCTGGATTGCTCAAAGAGAAGGCCGAGCAAAGGATGGTTTTGATAAAACTGAGCCTGCTATTA TTAAAATGTTTTACGTCAACGGTAAAAAACAAAAAATAAGTTTCTCAGATTACATTAATAAATTGAATATTGTACCTGTT GCGATTTCCTATGAATTTGACCCTTGTGATCAGCAAAAGGCTCAGGAATTATATGATAAGGCGCAATTTGGAGAGTATAA AAAATCAAAATATGAAGATATTGAAAGTATTGTCCGAGGGATTACCGGGAAAAAAGGGCGAGTTCATGTGGCTTTCGGAC AGCCCCTAAAAGGTGAATTTAGCGATGCAGAGACAGTTGCACAAGAAATCGATCGTCAGATTTATAAAAATTATCATTTA CACTCCTCTAACTTTATTGCCGCCAAGCAAGACATTTCCTCTATTGATATTGCTGATCAGGAGCTCTTTAATGCCCGCTT ACAGGGTTTTAAACCCGAGTTGCAAGAAATTGTATTAAAAATGTACGCGAATCCGGTCAGTAACCATATAAAGTGA
Upstream 100 bases:
>100_bases ATACCGCATCTCCGTAAGACTTAACTGCCTCCCTTATTTAATTAAATTCGCTGAAGCCTTTAAAAGAATGTAAAATGCGC CGATATATTTTATAGAGAGT
Downstream 100 bases:
>100_bases TCTGATGTTCGTCAACTAAAAAAAATTTCTGTTTATGCACATATCGAAAAATTCCTTATGTGCCTATTTTTGTCATACTC AATCTGTAACATATTGAAAA
Product: phospholipid/glycerol acyltransferase
Products: NA
Alternate protein names: Acyltransferase Family Protein; Acyltransferase; Acyltransferase Domain Protein; Glycerol-3-Phosphate O-Acyltransferase; Cytochrome Oxidase Maturation -Type
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MKMPNAVDKFRDIRPYNDDEIQPAIQRVIKNDEFINAIICFRFSKIAKFMGFLLTPLLRRYFLYKWGGINSIDEMQKVVG GYMEHMIASTTTGFTYSGLDKIDPTKNYLFVSNHRDIAMDPAFVNWALYSENFKTVRVAIGDNLLSKPYVSDLMRMNKSF IVQRSVSGIREMMKSLGQLSDYIFSSLQGESNIWIAQREGRAKDGFDKTEPAIIKMFYVNGKKQKISFSDYINKLNIVPV AISYEFDPCDQQKAQELYDKAQFGEYKKSKYEDIESIVRGITGKKGRVHVAFGQPLKGEFSDAETVAQEIDRQIYKNYHL HSSNFIAAKQDISSIDIADQELFNARLQGFKPELQEIVLKMYANPVSNHIK
Sequences:
>Translated_371_residues MKMPNAVDKFRDIRPYNDDEIQPAIQRVIKNDEFINAIICFRFSKIAKFMGFLLTPLLRRYFLYKWGGINSIDEMQKVVG GYMEHMIASTTTGFTYSGLDKIDPTKNYLFVSNHRDIAMDPAFVNWALYSENFKTVRVAIGDNLLSKPYVSDLMRMNKSF IVQRSVSGIREMMKSLGQLSDYIFSSLQGESNIWIAQREGRAKDGFDKTEPAIIKMFYVNGKKQKISFSDYINKLNIVPV AISYEFDPCDQQKAQELYDKAQFGEYKKSKYEDIESIVRGITGKKGRVHVAFGQPLKGEFSDAETVAQEIDRQIYKNYHL HSSNFIAAKQDISSIDIADQELFNARLQGFKPELQEIVLKMYANPVSNHIK >Mature_371_residues MKMPNAVDKFRDIRPYNDDEIQPAIQRVIKNDEFINAIICFRFSKIAKFMGFLLTPLLRRYFLYKWGGINSIDEMQKVVG GYMEHMIASTTTGFTYSGLDKIDPTKNYLFVSNHRDIAMDPAFVNWALYSENFKTVRVAIGDNLLSKPYVSDLMRMNKSF IVQRSVSGIREMMKSLGQLSDYIFSSLQGESNIWIAQREGRAKDGFDKTEPAIIKMFYVNGKKQKISFSDYINKLNIVPV AISYEFDPCDQQKAQELYDKAQFGEYKKSKYEDIESIVRGITGKKGRVHVAFGQPLKGEFSDAETVAQEIDRQIYKNYHL HSSNFIAAKQDISSIDIADQELFNARLQGFKPELQEIVLKMYANPVSNHIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42699; Mature: 42699
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMPNAVDKFRDIRPYNDDEIQPAIQRVIKNDEFINAIICFRFSKIAKFMGFLLTPLLRR CCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFLYKWGGINSIDEMQKVVGGYMEHMIASTTTGFTYSGLDKIDPTKNYLFVSNHRDIAMD HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEEECCCCEEEC PAFVNWALYSENFKTVRVAIGDNLLSKPYVSDLMRMNKSFIVQRSVSGIREMMKSLGQLS CHHHEEEEECCCCCEEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DYIFSSLQGESNIWIAQREGRAKDGFDKTEPAIIKMFYVNGKKQKISFSDYINKLNIVPV HHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEEHHHHHCCCCEEEE AISYEFDPCDQQKAQELYDKAQFGEYKKSKYEDIESIVRGITGKKGRVHVAFGQPLKGEF EEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC SDAETVAQEIDRQIYKNYHLHSSNFIAAKQDISSIDIADQELFNARLQGFKPELQEIVLK CHHHHHHHHHHHHHHHHCCCCCCCCEEHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH MYANPVSNHIK HHHCHHHHCCC >Mature Secondary Structure MKMPNAVDKFRDIRPYNDDEIQPAIQRVIKNDEFINAIICFRFSKIAKFMGFLLTPLLRR CCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFLYKWGGINSIDEMQKVVGGYMEHMIASTTTGFTYSGLDKIDPTKNYLFVSNHRDIAMD HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEEECCCCEEEC PAFVNWALYSENFKTVRVAIGDNLLSKPYVSDLMRMNKSFIVQRSVSGIREMMKSLGQLS CHHHEEEEECCCCCEEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DYIFSSLQGESNIWIAQREGRAKDGFDKTEPAIIKMFYVNGKKQKISFSDYINKLNIVPV HHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEEHHHHHCCCCEEEE AISYEFDPCDQQKAQELYDKAQFGEYKKSKYEDIESIVRGITGKKGRVHVAFGQPLKGEF EEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC SDAETVAQEIDRQIYKNYHLHSSNFIAAKQDISSIDIADQELFNARLQGFKPELQEIVLK CHHHHHHHHHHHHHHHHCCCCCCCCEEHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH MYANPVSNHIK HHHCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA