Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119946726
Identifier: 119946726
GI number: 119946726
Start: 3825230
End: 3826603
Strand: Reverse
Name: 119946726
Synonym: Ping_3110
Alternate gene names: NA
Gene position: 3826603-3825230 (Counterclockwise)
Preceding gene: 119946727
Following gene: 119946725
Centisome position: 83.92
GC content: 30.28
Gene sequence:
>1374_bases ATGAAGAACTGTTATTTTTGTAAAAAAGAATTCGATACTGTTAATGTTAGAATGCATGATGAGCACATAATACAAAATTC AATTGGTGGTAAATTGACGTCATCAGATATCCTTTGTGAAAAATGTGGTGGGGTTTTAGGACAAAATGTTGATGAAGCTT TTACTCGTAATCTTTCTCCTCTTTCTGTTCTGTTGGATTTAGCAAGGGATCGCGGTGAAAGCTCAAAATCAAGAATTAGA ATTGTTATGAATGATGGCTCAGTGTTAAATGATGATAATGTAACGTTTGAGTTAAAAAATGACTTCTCCATAATACCATC AAGACCAGTTTATATTCTCAATGAGGATGAAAAAACATTAAATATTTTTGGGGCTACGCTTAAACAAATCAATCAATTCG AAAAAAGCAAAGTCATAAAAAAACTAATTAATGAGGGATATAAGGTAAAGAAAGAGGTAAATGTAGCGTCTTATGTCAAT TCTGCTGTATTAGATATTAACTATGAATCACCTGATATTCTTAGAGGTATATTAAAAGCTGCTATAGGTTTCGCTTCTCA CCATGGTGTTCCTAATAAGTATTTATCTCAACTGACTAATGTTTCAAAGTTGATTGACAGTGATAATTTTATACATAATC GCGTTTGGCAGTATTATCCAACAACAGATGAAGAAAAAATCTATGAAACTAATAAAGAAAAGCATGAGGATTGGTACCCA AATCATCAAATTTATTTATTTAATATAGGTGAAAATTTATATTGTTACGTAGAGTTATTTGGCGTCATACAAAAATACGT TCATTTGACTGATAGTTATGATGGAGATGAAATAAGAGAAAAATACCTACAAAAAACGACTAAGTGGGAGTTTAATGAAG AAGATTGGAAACCGAGACGTTTAAGTGACTTGCAAATATTAGCTCAACAATTTGATGTACCATATAGCAATGAAAAGATT GACGATATAGGAAAAACTATTTTGCAAAGAGCAAGATCAAGATCTTATATTATAGATTCTGAGTCACAAACTGAAAAGGT TGAAAAAATAATGCAAAGTATAATTTTGTATACAACCTCAGATATAAGAGGATATGCTATTGTTGATGAGCTACACGATA AGGCTGATATGGCAAAATCAAAGTTTAATTTTTCGCTTGTAGATAAGATAAAGAATAACCCATTGAGTGCTATGCAATTG ATGCATAAAGATTATTCTGACTTTAGAATTGGTGATGTTAATAATAGCTGTCCTCTAAAATCTAAAAGTTTATCTGAAAA TGCAAAAAACAAATATGTGGCTTATAAAGCGTTTGAGTTATTATCTAGCTTAAATCTTGAAAATAAAATTGAATTTAAAG TTATTGACCCGTAA
Upstream 100 bases:
>100_bases GTCGCAGTTTTTGCTAAAAGAAAAAGCAGCACCAACTTACTCGCCGGTGAGTAAGTTGCCTAGCTCCTCTTATAATTAAA AATCTAATTTGGTTAGAAAT
Downstream 100 bases:
>100_bases AGAGCTATAAGTTAATCAACAAGGACAAAATACGGCTGGCTATCTCGCTGTGCTCGTATTTTAGCCAACCGCATTTTGCC TGTTATTAAGTAATAAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MKNCYFCKKEFDTVNVRMHDEHIIQNSIGGKLTSSDILCEKCGGVLGQNVDEAFTRNLSPLSVLLDLARDRGESSKSRIR IVMNDGSVLNDDNVTFELKNDFSIIPSRPVYILNEDEKTLNIFGATLKQINQFEKSKVIKKLINEGYKVKKEVNVASYVN SAVLDINYESPDILRGILKAAIGFASHHGVPNKYLSQLTNVSKLIDSDNFIHNRVWQYYPTTDEEKIYETNKEKHEDWYP NHQIYLFNIGENLYCYVELFGVIQKYVHLTDSYDGDEIREKYLQKTTKWEFNEEDWKPRRLSDLQILAQQFDVPYSNEKI DDIGKTILQRARSRSYIIDSESQTEKVEKIMQSIILYTTSDIRGYAIVDELHDKADMAKSKFNFSLVDKIKNNPLSAMQL MHKDYSDFRIGDVNNSCPLKSKSLSENAKNKYVAYKAFELLSSLNLENKIEFKVIDP
Sequences:
>Translated_457_residues MKNCYFCKKEFDTVNVRMHDEHIIQNSIGGKLTSSDILCEKCGGVLGQNVDEAFTRNLSPLSVLLDLARDRGESSKSRIR IVMNDGSVLNDDNVTFELKNDFSIIPSRPVYILNEDEKTLNIFGATLKQINQFEKSKVIKKLINEGYKVKKEVNVASYVN SAVLDINYESPDILRGILKAAIGFASHHGVPNKYLSQLTNVSKLIDSDNFIHNRVWQYYPTTDEEKIYETNKEKHEDWYP NHQIYLFNIGENLYCYVELFGVIQKYVHLTDSYDGDEIREKYLQKTTKWEFNEEDWKPRRLSDLQILAQQFDVPYSNEKI DDIGKTILQRARSRSYIIDSESQTEKVEKIMQSIILYTTSDIRGYAIVDELHDKADMAKSKFNFSLVDKIKNNPLSAMQL MHKDYSDFRIGDVNNSCPLKSKSLSENAKNKYVAYKAFELLSSLNLENKIEFKVIDP >Mature_457_residues MKNCYFCKKEFDTVNVRMHDEHIIQNSIGGKLTSSDILCEKCGGVLGQNVDEAFTRNLSPLSVLLDLARDRGESSKSRIR IVMNDGSVLNDDNVTFELKNDFSIIPSRPVYILNEDEKTLNIFGATLKQINQFEKSKVIKKLINEGYKVKKEVNVASYVN SAVLDINYESPDILRGILKAAIGFASHHGVPNKYLSQLTNVSKLIDSDNFIHNRVWQYYPTTDEEKIYETNKEKHEDWYP NHQIYLFNIGENLYCYVELFGVIQKYVHLTDSYDGDEIREKYLQKTTKWEFNEEDWKPRRLSDLQILAQQFDVPYSNEKI DDIGKTILQRARSRSYIIDSESQTEKVEKIMQSIILYTTSDIRGYAIVDELHDKADMAKSKFNFSLVDKIKNNPLSAMQL MHKDYSDFRIGDVNNSCPLKSKSLSENAKNKYVAYKAFELLSSLNLENKIEFKVIDP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52845; Mature: 52845
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNCYFCKKEFDTVNVRMHDEHIIQNSIGGKLTSSDILCEKCGGVLGQNVDEAFTRNLSP CCCCEEECCCCCEEEEEECHHHHHHHHCCCCCCCHHHHHHHHCCHHCCCHHHHHHCCCCH LSVLLDLARDRGESSKSRIRIVMNDGSVLNDDNVTFELKNDFSIIPSRPVYILNEDEKTL HHHHHHHHHCCCCCCCCEEEEEECCCCEECCCCEEEEECCCCEECCCCCEEEECCCCCHH NIFGATLKQINQFEKSKVIKKLINEGYKVKKEVNVASYVNSAVLDINYESPDILRGILKA HHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCEEEEECCCCHHHHHHHHHH AIGFASHHGVPNKYLSQLTNVSKLIDSDNFIHNRVWQYYPTTDEEKIYETNKEKHEDWYP HHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHCCEEECCCCCHHHHHHCCCHHCCCCCC NHQIYLFNIGENLYCYVELFGVIQKYVHLTDSYDGDEIREKYLQKTTKWEFNEEDWKPRR CCEEEEEECCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCH LSDLQILAQQFDVPYSNEKIDDIGKTILQRARSRSYIIDSESQTEKVEKIMQSIILYTTS HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCC DIRGYAIVDELHDKADMAKSKFNFSLVDKIKNNPLSAMQLMHKDYSDFRIGDVNNSCPLK CCCCEEHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCCCEECCCCCCCCCC SKSLSENAKNKYVAYKAFELLSSLNLENKIEFKVIDP CCHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECC >Mature Secondary Structure MKNCYFCKKEFDTVNVRMHDEHIIQNSIGGKLTSSDILCEKCGGVLGQNVDEAFTRNLSP CCCCEEECCCCCEEEEEECHHHHHHHHCCCCCCCHHHHHHHHCCHHCCCHHHHHHCCCCH LSVLLDLARDRGESSKSRIRIVMNDGSVLNDDNVTFELKNDFSIIPSRPVYILNEDEKTL HHHHHHHHHCCCCCCCCEEEEEECCCCEECCCCEEEEECCCCEECCCCCEEEECCCCCHH NIFGATLKQINQFEKSKVIKKLINEGYKVKKEVNVASYVNSAVLDINYESPDILRGILKA HHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCEEEEECCCCHHHHHHHHHH AIGFASHHGVPNKYLSQLTNVSKLIDSDNFIHNRVWQYYPTTDEEKIYETNKEKHEDWYP HHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHCCEEECCCCCHHHHHHCCCHHCCCCCC NHQIYLFNIGENLYCYVELFGVIQKYVHLTDSYDGDEIREKYLQKTTKWEFNEEDWKPRR CCEEEEEECCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCH LSDLQILAQQFDVPYSNEKIDDIGKTILQRARSRSYIIDSESQTEKVEKIMQSIILYTTS HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCC DIRGYAIVDELHDKADMAKSKFNFSLVDKIKNNPLSAMQLMHKDYSDFRIGDVNNSCPLK CCCCEEHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCCCEECCCCCCCCCC SKSLSENAKNKYVAYKAFELLSSLNLENKIEFKVIDP CCHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA