Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119945624
Identifier: 119945624
GI number: 119945624
Start: 2360154
End: 2360486
Strand: Reverse
Name: 119945624
Synonym: Ping_1934
Alternate gene names: NA
Gene position: 2360486-2360154 (Counterclockwise)
Preceding gene: 119945625
Following gene: 119945623
Centisome position: 51.77
GC content: 36.34
Gene sequence:
>333_bases ATGGCCACGATTAAGTATTCAATTATGAAGATGGTTTATACCAATGAAAGTCACTTTCTTGCGAACAATGTAAAAAATCT TATTGAGGCGCAAGAAATAAATACATTTCTTAAAAATGAATTTGCACAGGGTGCGATGGGGGAAATATCTCCCCTCGATT CCTGGCCTGAAGTTTGGGTTTATAACAATTCAGATTTTGATCGTGCGCTGGAAATCGCAACATCATCGCAGAGCAGTAGT GAAAAAAATGATTGGATTTGTAAAAATTGTTCTGAGAAAAATGATCCTTCTTTTGAGATATGCTGGAACTGTCAGCGTGA AAATGCACAATAA
Upstream 100 bases:
>100_bases GTTATAGTTTATTCGTTTGTATCAGTATTTATAGGGATAAGCACATAACAATCAGTTCCAGTGGATTCCCAACTGTTGCA ACACACACCTGACGTCGCTT
Downstream 100 bases:
>100_bases GTTGTTCAAGCGGGAAAAAATACCCTTGGTTTTTTTGCTCCGCTCAATATTTTAGCCCACTATATTATTGCTTCTTAATA AGGGCGTTATTTTTTCAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Protein Containing Zn-Ribbon Like Domain
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MATIKYSIMKMVYTNESHFLANNVKNLIEAQEINTFLKNEFAQGAMGEISPLDSWPEVWVYNNSDFDRALEIATSSQSSS EKNDWICKNCSEKNDPSFEICWNCQRENAQ
Sequences:
>Translated_110_residues MATIKYSIMKMVYTNESHFLANNVKNLIEAQEINTFLKNEFAQGAMGEISPLDSWPEVWVYNNSDFDRALEIATSSQSSS EKNDWICKNCSEKNDPSFEICWNCQRENAQ >Mature_109_residues ATIKYSIMKMVYTNESHFLANNVKNLIEAQEINTFLKNEFAQGAMGEISPLDSWPEVWVYNNSDFDRALEIATSSQSSSE KNDWICKNCSEKNDPSFEICWNCQRENAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12683; Mature: 12552
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: PS01358 ZF_RANBP2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIKYSIMKMVYTNESHFLANNVKNLIEAQEINTFLKNEFAQGAMGEISPLDSWPEVWV CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE YNNSDFDRALEIATSSQSSSEKNDWICKNCSEKNDPSFEICWNCQRENAQ ECCCCHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure ATIKYSIMKMVYTNESHFLANNVKNLIEAQEINTFLKNEFAQGAMGEISPLDSWPEVWV CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE YNNSDFDRALEIATSSQSSSEKNDWICKNCSEKNDPSFEICWNCQRENAQ ECCCCHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA