Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119945589
Identifier: 119945589
GI number: 119945589
Start: 2301921
End: 2302619
Strand: Reverse
Name: 119945589
Synonym: Ping_1894
Alternate gene names: NA
Gene position: 2302619-2301921 (Counterclockwise)
Preceding gene: 119945594
Following gene: 119945587
Centisome position: 50.5
GC content: 35.62
Gene sequence:
>699_bases ATGTTAGTGTTTAATTTAAGTAAAGCGGCAGCCGAGTTTTTTACCGTAACCCGTAAAGGGGAAAAAATATCCTGCATAGA GCCCGCCCCCCATAAAACGATTGCTGAATCTATTAAAACCCCATTTTTTCCGAAAGATATTGAAGCACAAAAAAATAATG ACTTTCAATGGCAATGGGTAGTGCATTGTGTTTCGGTTAAGCGTCAAAAATATCTGCTAGTAATGGATTATCATAGCCGT TATTGCCTGACCTTTCCTGCGGGTAAAAAAGGGGATCAATATGAATTTTTTAATCTTGTCGAGAAGCATTTAAAATCAAC CTTTCGCTATATAGCGCATGAAAAAATGATCAACACTGTTGAGGTAGATAGCTGTGTTGATGTTTATAATAGTTTAGTTA ATACCTGTGCTTTTTATCAACGCGGCGATAGAAGCGTGCAGGCACATATTAATGAAGTGGTTTGGCATCTGGAAAGGCTT TGCTTTGAAGATGGAATGATTAAAGAAAATATTGATTGTTTACGATTTAACCTGTTCACCGGGCAAATCCCCCGTAGGAT AAAAGGCAATAAAGATTATCTATTTCCAAACCAAGAATATTTATCCTATTGGTTAAAGGCATTCTCTGCGGAAAATCGAG TGCCGTTTATTAACAATGATAATATTATTGATTTTTCTCAATATGTGAAAAAATGTTAA
Upstream 100 bases:
>100_bases CGGAAGATATTGAAGCGTTATAGAGGTCGGTTTTTCGGAAAATATTATTCATCAATTTGTGAGATACTGTACTTAGAATT AAAATTATTGGAAAAATATA
Downstream 100 bases:
>100_bases TCAGATAAAAGCACTGCCGTTTTGCACCATAGCAGTATGGATAATCTATTGATCGTTTCTCGCCTTTGTAAAAGGCTGAC CCACTAAAGGTTTAAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MLVFNLSKAAAEFFTVTRKGEKISCIEPAPHKTIAESIKTPFFPKDIEAQKNNDFQWQWVVHCVSVKRQKYLLVMDYHSR YCLTFPAGKKGDQYEFFNLVEKHLKSTFRYIAHEKMINTVEVDSCVDVYNSLVNTCAFYQRGDRSVQAHINEVVWHLERL CFEDGMIKENIDCLRFNLFTGQIPRRIKGNKDYLFPNQEYLSYWLKAFSAENRVPFINNDNIIDFSQYVKKC
Sequences:
>Translated_232_residues MLVFNLSKAAAEFFTVTRKGEKISCIEPAPHKTIAESIKTPFFPKDIEAQKNNDFQWQWVVHCVSVKRQKYLLVMDYHSR YCLTFPAGKKGDQYEFFNLVEKHLKSTFRYIAHEKMINTVEVDSCVDVYNSLVNTCAFYQRGDRSVQAHINEVVWHLERL CFEDGMIKENIDCLRFNLFTGQIPRRIKGNKDYLFPNQEYLSYWLKAFSAENRVPFINNDNIIDFSQYVKKC >Mature_232_residues MLVFNLSKAAAEFFTVTRKGEKISCIEPAPHKTIAESIKTPFFPKDIEAQKNNDFQWQWVVHCVSVKRQKYLLVMDYHSR YCLTFPAGKKGDQYEFFNLVEKHLKSTFRYIAHEKMINTVEVDSCVDVYNSLVNTCAFYQRGDRSVQAHINEVVWHLERL CFEDGMIKENIDCLRFNLFTGQIPRRIKGNKDYLFPNQEYLSYWLKAFSAENRVPFINNDNIIDFSQYVKKC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27387; Mature: 27387
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVFNLSKAAAEFFTVTRKGEKISCIEPAPHKTIAESIKTPFFPKDIEAQKNNDFQWQWV CEEEECHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH VHCVSVKRQKYLLVMDYHSRYCLTFPAGKKGDQYEFFNLVEKHLKSTFRYIAHEKMINTV HHHHHHHCCCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVDSCVDVYNSLVNTCAFYQRGDRSVQAHINEVVWHLERLCFEDGMIKENIDCLRFNLFT HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC GQIPRRIKGNKDYLFPNQEYLSYWLKAFSAENRVPFINNDNIIDFSQYVKKC CCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCEECHHHHHHCC >Mature Secondary Structure MLVFNLSKAAAEFFTVTRKGEKISCIEPAPHKTIAESIKTPFFPKDIEAQKNNDFQWQWV CEEEECHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH VHCVSVKRQKYLLVMDYHSRYCLTFPAGKKGDQYEFFNLVEKHLKSTFRYIAHEKMINTV HHHHHHHCCCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVDSCVDVYNSLVNTCAFYQRGDRSVQAHINEVVWHLERLCFEDGMIKENIDCLRFNLFT HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC GQIPRRIKGNKDYLFPNQEYLSYWLKAFSAENRVPFINNDNIIDFSQYVKKC CCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCEECHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA