Click here to switch to the map view.

The map label for this gene is yegE [C]

Identifier: 119944950

GI number: 119944950

Start: 1491505

End: 1491879

Strand: Direct

Name: yegE [C]

Synonym: Ping_1198

Alternate gene names: 119944950

Gene position: 1491505-1491879 (Clockwise)

Preceding gene: 119944949

Following gene: 119944951

Centisome position: 32.71

GC content: 36.53

Gene sequence:

>375_bases
TTGAAACCGCAGATAAAAGGTTATTTTAAAAAACAAAAATCATGTCACTATTTGAATTTCAAGCAAGTAAAATCTCATGC
CAAAGCCGCAACAAAAAAATTACGAAATAGAGTCAAAGAGATCTCGAAAAGACGGTTGGAATTAGTACGCCAGTCAGATA
TCGTCGCCCGTTTAGGGGGAAATGAATTTGTTTTAGTTCTGAATAACTCCAAAATAAAAGATGAAACTTTGCAGGTGGCA
GAGCGAATTATAAGCGTGATTAATAAGCCTGTTGAACTGTCTGGTAGCACGCTTCAAATAGGCGCATCGGTTTGGATTTT
AATGTTCCCCGATGATGGCATAAAGTCGATGGATTTAATTGAAAAAGCAGATTAA

Upstream 100 bases:

>100_bases
TGATATAGTAGGGGATGAGCATGAGTTAAATGTGATAACAAGGAGTCATTAATTTTTCCCTCTCAACACCTTAAGTATTT
TACTAAGGTATCTTCATTGG

Downstream 100 bases:

>100_bases
GCCATGTGTGTATCAAAATCCTCAGGCAGGAATTTGATTAAATAAATTAAGGCACAGCGTTACACTTGCCAGTTAAAGCT
TAGTGCAAAAGATCAAGCCC

Product: cyclic-di-GMP regulatory protein

Products: NA

Alternate protein names: Diguanylate Cyclase/Phosphodiesterase; Diguanylate Cyclase With PAS/PAC Sensor; Diguanylate Cyclase With PAS/PAC And GAF Sensors; Sensory Box/GGDEF Family Protein; Diguanylate Cyclase With GAF Sensor; Sensory Box Protein; Cyclic-Di-GMP Regulatory Protein; Signal Transduction Protein; Regulatory Components Of Sensory Transduction System; C-Di-GMP Phosphodiesterase A; Periplasmic/7TM Domain Sensor Diguanylate Cyclase; Signaling Protein; Response Regulator Receiver Protein

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MKPQIKGYFKKQKSCHYLNFKQVKSHAKAATKKLRNRVKEISKRRLELVRQSDIVARLGGNEFVLVLNNSKIKDETLQVA
ERIISVINKPVELSGSTLQIGASVWILMFPDDGIKSMDLIEKAD

Sequences:

>Translated_124_residues
MKPQIKGYFKKQKSCHYLNFKQVKSHAKAATKKLRNRVKEISKRRLELVRQSDIVARLGGNEFVLVLNNSKIKDETLQVA
ERIISVINKPVELSGSTLQIGASVWILMFPDDGIKSMDLIEKAD
>Mature_124_residues
MKPQIKGYFKKQKSCHYLNFKQVKSHAKAATKKLRNRVKEISKRRLELVRQSDIVARLGGNEFVLVLNNSKIKDETLQVA
ERIISVINKPVELSGSTLQIGASVWILMFPDDGIKSMDLIEKAD

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14110; Mature: 14110

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPQIKGYFKKQKSCHYLNFKQVKSHAKAATKKLRNRVKEISKRRLELVRQSDIVARLGG
CCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
NEFVLVLNNSKIKDETLQVAERIISVINKPVELSGSTLQIGASVWILMFPDDGIKSMDLI
CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEEEECCCCCCHHHHH
EKAD
HCCC
>Mature Secondary Structure
MKPQIKGYFKKQKSCHYLNFKQVKSHAKAATKKLRNRVKEISKRRLELVRQSDIVARLGG
CCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
NEFVLVLNNSKIKDETLQVAERIISVINKPVELSGSTLQIGASVWILMFPDDGIKSMDLI
CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEEEECCCCCCHHHHH
EKAD
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA