| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is engA
Identifier: 119944927
GI number: 119944927
Start: 1463082
End: 1464551
Strand: Direct
Name: engA
Synonym: Ping_1172
Alternate gene names: 119944927
Gene position: 1463082-1464551 (Clockwise)
Preceding gene: 119944926
Following gene: 119944928
Centisome position: 32.09
GC content: 42.38
Gene sequence:
>1470_bases ATGTTACCAGTTGTCGCTTTAGTCGGCCGCCCAAATGTGGGTAAATCAACTTTGTTTAACCGCTTAACTCGTACTCGTGA TGCATTAGTCGCGGATTTTCCAGGTTTAACGCGAGATCGTAAATACGGTCAGGCGAAAATCGATGAACACGAATTTATCG TTATTGATACAGGCGGTATTACCGGTGATGAAGAGGGTATTGATGCTTTAATGGCAGGTCAGTCTTTACTGGCCATTGAT GAAGCCGATGCGGTTTTGTTTTTAGTTGATGCACGTGCCGGTATGACCATTGCAGATGAAGCCATCGCAGATCACCTGCG TAAACAAGATAAAAAAGTCTTTGTTGTTGCTAACAAAACAGATGGTGTTGATGCCGATTCTGTTTGTGCCGAGTTTTATG CGCTTGGACTTGGCGAGGTTTATCATATCGCGGCTGCACAGGGTAAAGGTGTGCGCCAGATGATTGAGATCGCCTTAGAT GGTTTCTTCGATGATGTCGAGCAGGAAGATGACTTTTCTGATCTGGAAACTGGTCTTGAATTTGTTGAAGAAGATGAAGC TTTATTACTAAAAGAGCAGGAACGCCTGGCCGCTTTACCTATTAAATTGGCTCTAATAGGCCGTCCTAATGTGGGCAAGT CTACGCTTACCAATCGAATTTTAGGCGAAGAACGTGTTCTTGTGTACGATCTGCCCGGAACAACACGTGATAGTATTTAT ATTCCCATGAGCCGTGATGATCGGGAATATATTCTTATTGATACTGCCGGTGTGCGCAAGCGTAAAAAAGTAAACGAAAC CGTTGAAAAATTCTCTGTTATTAAAACATTACAAGCGATTGAAGACTGTAACGTTGTGCTCTTGATTATTGATGCACGAG ATGGTATTTCGGATCAGGATTTAAGTTTGTTAGGTTTTACCCTGAATGCGGGACGTTCATTAGTCATTGCTGTCAATAAA TGGGATGGCATGACCGAATACGACAAAGAGCGGGTTAAAAGTGAACTGGATCGCCGTTTAGGTTTTATCGATTTTGCAAA AATTCATTTTATCTCTGCGCTGCACGGAACGGGTGTCGGCCATTTATATGAATCTGTTGAAGAAGCCTATGACTCTTCGA CAAAACGTATCTCTACGTCAATTTTAACGCGTATTATGACCATGGCGGCAGCTGATCACGAGCCTCCTATGGTAGGTAGT CGTCGTGTTAAATTACGTTATGCCCATGCAGGGGGCTATAATCCGCCACTGATTGTTATTCATGGTAATCAAGTGAAAAA ATTAGCGGATTCTTACAAACGTTATTTGATGAATTACTTCCGCCGCTCACTGGGTATTATGGGCACACCGATTCGTATTG AATTCCGTGAAGGTACTAACCCGTTTGCAGGGCGTCGTAATAAATTGACACCAAATCAGATGTATAAACGTCAACGTCTG GTGAAGTTTCATAAAAAAAGTAAAAAATAA
Upstream 100 bases:
>100_bases CATCGATAAATGTAGAATAATTCCTTACATTTTTACTGTATACTTACAGCCCCTCGTATTTATTGCGGAGGGGCTTTTTT TTGTTTGATAGGATTGAAAT
Downstream 100 bases:
>100_bases TGGCATTAAAATGCCCTAAATGTGCTTATGAAATAGAGTCTAAGGGCATACAGAAACAACATTATTATTGTGATGCTTGC GACAGTGACTTAAAACTTCA
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKIDEHEFIVIDTGGITGDEEGIDALMAGQSLLAID EADAVLFLVDARAGMTIADEAIADHLRKQDKKVFVVANKTDGVDADSVCAEFYALGLGEVYHIAAAQGKGVRQMIEIALD GFFDDVEQEDDFSDLETGLEFVEEDEALLLKEQERLAALPIKLALIGRPNVGKSTLTNRILGEERVLVYDLPGTTRDSIY IPMSRDDREYILIDTAGVRKRKKVNETVEKFSVIKTLQAIEDCNVVLLIIDARDGISDQDLSLLGFTLNAGRSLVIAVNK WDGMTEYDKERVKSELDRRLGFIDFAKIHFISALHGTGVGHLYESVEEAYDSSTKRISTSILTRIMTMAAADHEPPMVGS RRVKLRYAHAGGYNPPLIVIHGNQVKKLADSYKRYLMNYFRRSLGIMGTPIRIEFREGTNPFAGRRNKLTPNQMYKRQRL VKFHKKSKK
Sequences:
>Translated_489_residues MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKIDEHEFIVIDTGGITGDEEGIDALMAGQSLLAID EADAVLFLVDARAGMTIADEAIADHLRKQDKKVFVVANKTDGVDADSVCAEFYALGLGEVYHIAAAQGKGVRQMIEIALD GFFDDVEQEDDFSDLETGLEFVEEDEALLLKEQERLAALPIKLALIGRPNVGKSTLTNRILGEERVLVYDLPGTTRDSIY IPMSRDDREYILIDTAGVRKRKKVNETVEKFSVIKTLQAIEDCNVVLLIIDARDGISDQDLSLLGFTLNAGRSLVIAVNK WDGMTEYDKERVKSELDRRLGFIDFAKIHFISALHGTGVGHLYESVEEAYDSSTKRISTSILTRIMTMAAADHEPPMVGS RRVKLRYAHAGGYNPPLIVIHGNQVKKLADSYKRYLMNYFRRSLGIMGTPIRIEFREGTNPFAGRRNKLTPNQMYKRQRL VKFHKKSKK >Mature_489_residues MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKIDEHEFIVIDTGGITGDEEGIDALMAGQSLLAID EADAVLFLVDARAGMTIADEAIADHLRKQDKKVFVVANKTDGVDADSVCAEFYALGLGEVYHIAAAQGKGVRQMIEIALD GFFDDVEQEDDFSDLETGLEFVEEDEALLLKEQERLAALPIKLALIGRPNVGKSTLTNRILGEERVLVYDLPGTTRDSIY IPMSRDDREYILIDTAGVRKRKKVNETVEKFSVIKTLQAIEDCNVVLLIIDARDGISDQDLSLLGFTLNAGRSLVIAVNK WDGMTEYDKERVKSELDRRLGFIDFAKIHFISALHGTGVGHLYESVEEAYDSSTKRISTSILTRIMTMAAADHEPPMVGS RRVKLRYAHAGGYNPPLIVIHGNQVKKLADSYKRYLMNYFRRSLGIMGTPIRIEFREGTNPFAGRRNKLTPNQMYKRQRL VKFHKKSKK
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=490, Percent_Identity=70, Blast_Score=701, Evalue=0.0, Organism=Escherichia coli, GI2367268, Length=149, Percent_Identity=32.2147651006711, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323665, Length=254, Percent_Identity=26.3779527559055, Blast_Score=80, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_PSYIN (A1SU43)
Other databases:
- EMBL: CP000510 - RefSeq: YP_942607.1 - ProteinModelPortal: A1SU43 - SMR: A1SU43 - STRING: A1SU43 - GeneID: 4624470 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_1172 - eggNOG: COG1160 - HOGENOM: HBG592135 - OMA: KCEKAFD - PhylomeDB: A1SU43 - ProtClustDB: PRK00093 - BioCyc: PING357804:PING_1172-MONOMER - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR003593 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - SMART: SM00382 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 54655; Mature: 54655
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKIDEHEFIVIDTGGI CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCC TGDEEGIDALMAGQSLLAIDEADAVLFLVDARAGMTIADEAIADHLRKQDKKVFVVANKT CCCHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCEEHHHHHHHHHHHCCCEEEEEECCC DGVDADSVCAEFYALGLGEVYHIAAAQGKGVRQMIEIALDGFFDDVEQEDDFSDLETGLE CCCCHHHHHHHHHHHCCCHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH FVEEDEALLLKEQERLAALPIKLALIGRPNVGKSTLTNRILGEERVLVYDLPGTTRDSIY HHCCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCEE IPMSRDDREYILIDTAGVRKRKKVNETVEKFSVIKTLQAIEDCNVVLLIIDARDGISDQD EECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC LSLLGFTLNAGRSLVIAVNKWDGMTEYDKERVKSELDRRLGFIDFAKIHFISALHGTGVG CEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHH HLYESVEEAYDSSTKRISTSILTRIMTMAAADHEPPMVGSRRVKLRYAHAGGYNPPLIVI HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCEEEE HGNQVKKLADSYKRYLMNYFRRSLGIMGTPIRIEFREGTNPFAGRRNKLTPNQMYKRQRL ECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHH VKFHKKSKK HHHHHHCCC >Mature Secondary Structure MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKIDEHEFIVIDTGGI CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCC TGDEEGIDALMAGQSLLAIDEADAVLFLVDARAGMTIADEAIADHLRKQDKKVFVVANKT CCCHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCEEHHHHHHHHHHHCCCEEEEEECCC DGVDADSVCAEFYALGLGEVYHIAAAQGKGVRQMIEIALDGFFDDVEQEDDFSDLETGLE CCCCHHHHHHHHHHHCCCHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH FVEEDEALLLKEQERLAALPIKLALIGRPNVGKSTLTNRILGEERVLVYDLPGTTRDSIY HHCCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCEE IPMSRDDREYILIDTAGVRKRKKVNETVEKFSVIKTLQAIEDCNVVLLIIDARDGISDQD EECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC LSLLGFTLNAGRSLVIAVNKWDGMTEYDKERVKSELDRRLGFIDFAKIHFISALHGTGVG CEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHH HLYESVEEAYDSSTKRISTSILTRIMTMAAADHEPPMVGSRRVKLRYAHAGGYNPPLIVI HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCEEEE HGNQVKKLADSYKRYLMNYFRRSLGIMGTPIRIEFREGTNPFAGRRNKLTPNQMYKRQRL ECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHH VKFHKKSKK HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA