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The map label for this gene is rng [H]

Identifier: 119944882

GI number: 119944882

Start: 1410031

End: 1411506

Strand: Direct

Name: rng [H]

Synonym: Ping_1126

Alternate gene names: 119944882

Gene position: 1410031-1411506 (Clockwise)

Preceding gene: 119944881

Following gene: 119944883

Centisome position: 30.92

GC content: 41.33

Gene sequence:

>1476_bases
ATGTCCGTTGAATTATTAATGAATATCACCCCCACCGAAACACGCGTTGCGTTAGTTGAAGGTGGTGTACTGCAAGAGCT
ACATATAGAGCGTCAGGCGACCAAAGGAATTGTTGGTAATATATACAAAGGCAAAGTCAGCAGAGTGTTAGCCGGCATGC
AAGCCGCTTTTGTTGATATTGGCTTGGAAAAGGCGGCATTTTTACATGCTTCAGACATTGTGCCCTTTACAGAATGTGTT
GCCAAGAATGAAAAAGCAAAATTTAAAGTTGCAGATATCTCACAACTTGTCCGTCCAGGGCAGGATATTATGGTGCAGGT
GGTTAAAGATCCGCTCGGCACTAAGGGAGCCCGTCTTACAACTGATATAACCTTGCCTTCACGCTATTTGGTTTTTATGC
CTGGAACAGGCCATGTTGGTGTATCACAGCGTATTGAAAGTGCACAGGAACGTGAACGTTTAAAGGTAATCGCCCAAGGC
TGCTGTGTCAATGATCTGGGCGGCTTTATTATCCGTACAGCGGCAGATGGCGCACCGGAAAAGGAGTTGATTAACGATGC
GGCTTTTTTACTCCGAGTTTGGCGTAAAGTATTGACGCGTCGTAAGCGGACTGCTAGCAAAAACAGGCTACTTTACCGTG
ACTTAGGACTCGCATTTCGTATACTGAGAGATTTTGTTGGTGAGGAAATAGACAGAGTACGTATTGATTCGCGATTAAAT
TTTAGTCTGATTCAGAAGTTTACCCATGATTTTGTACCTGAACTGGAGGATAAAATCGAATGTTACCGGGGTAAAAGCCC
TATTTTTGATCTGTTCGATGTTGAAAATGAAGTGCAGCGTGCATTAGAGCGTAAGGTGGAACTTAAATCAGGTGGATATT
TGATTATTGATCAGACCGAAGCGATGACCACTGTTGATATTAATACCGGTGCATTTGTTGGCCATAGAAATCTTGAAGAG
ACGATATTTAATACCAATATTGAAGCGACACAGGCTATTGCCAGGCAATTACGTTTACGCAATTTAGGCGGTATTATTAT
TATTGATTTCATCGACATGCAGTCAGTTGAACATAAACGCAGAGTATTTAACAGTTTAGAACAAGCATTGTCAAAAGATC
GTGTTAAAACCAATATCAATGATTTTTCTCCCTTAGGTTTAATTGAAATGACACGCAAACGCACGCAGGAAAGTTTAGAG
CATATTTTCTGTGGTGTTTGTGAGCAGTGTAGTGGACGCGGTTATATTAAAACAGTAGAAACCGTTTGTTATGAAGTTCT
GCGTGAAATATTACGCGTGAATCGCGCCTATGATGCTGATCGTTTTGTTGTTTATACGTCACCTAAAGTGGCTGAGGCAT
TAACGGGGGATGAATCTCATAACCTGGCTGAATTAGTTTTATTTATGGAAAAACCGGTTAAAATTAATGCTGAGCCTCTC
TATGGTCAAGAACAGTTTGATGTTGTAATGATGTGA

Upstream 100 bases:

>100_bases
CTTGGCGATGTAGTAAGAAGTTTGGGTATAAATTGCTGCTTCATATTGTTTATATTATTAAGCGATACAGCTTATAAAAA
ATTTTAAAGGAATTGGTCTA

Downstream 100 bases:

>100_bases
TAGGAAGATATATGACCTTTAAAAATTCAGGTATTCGAAGTGCTGATCTAGGCTTTATTTTCTTTCATATTGAGTCGGTA
AATTGAAATTCTGCTCTTTA

Product: ribonuclease G

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 491; Mature: 490

Protein sequence:

>491_residues
MSVELLMNITPTETRVALVEGGVLQELHIERQATKGIVGNIYKGKVSRVLAGMQAAFVDIGLEKAAFLHASDIVPFTECV
AKNEKAKFKVADISQLVRPGQDIMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGTGHVGVSQRIESAQERERLKVIAQG
CCVNDLGGFIIRTAADGAPEKELINDAAFLLRVWRKVLTRRKRTASKNRLLYRDLGLAFRILRDFVGEEIDRVRIDSRLN
FSLIQKFTHDFVPELEDKIECYRGKSPIFDLFDVENEVQRALERKVELKSGGYLIIDQTEAMTTVDINTGAFVGHRNLEE
TIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMQSVEHKRRVFNSLEQALSKDRVKTNINDFSPLGLIEMTRKRTQESLE
HIFCGVCEQCSGRGYIKTVETVCYEVLREILRVNRAYDADRFVVYTSPKVAEALTGDESHNLAELVLFMEKPVKINAEPL
YGQEQFDVVMM

Sequences:

>Translated_491_residues
MSVELLMNITPTETRVALVEGGVLQELHIERQATKGIVGNIYKGKVSRVLAGMQAAFVDIGLEKAAFLHASDIVPFTECV
AKNEKAKFKVADISQLVRPGQDIMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGTGHVGVSQRIESAQERERLKVIAQG
CCVNDLGGFIIRTAADGAPEKELINDAAFLLRVWRKVLTRRKRTASKNRLLYRDLGLAFRILRDFVGEEIDRVRIDSRLN
FSLIQKFTHDFVPELEDKIECYRGKSPIFDLFDVENEVQRALERKVELKSGGYLIIDQTEAMTTVDINTGAFVGHRNLEE
TIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMQSVEHKRRVFNSLEQALSKDRVKTNINDFSPLGLIEMTRKRTQESLE
HIFCGVCEQCSGRGYIKTVETVCYEVLREILRVNRAYDADRFVVYTSPKVAEALTGDESHNLAELVLFMEKPVKINAEPL
YGQEQFDVVMM
>Mature_490_residues
SVELLMNITPTETRVALVEGGVLQELHIERQATKGIVGNIYKGKVSRVLAGMQAAFVDIGLEKAAFLHASDIVPFTECVA
KNEKAKFKVADISQLVRPGQDIMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGTGHVGVSQRIESAQERERLKVIAQGC
CVNDLGGFIIRTAADGAPEKELINDAAFLLRVWRKVLTRRKRTASKNRLLYRDLGLAFRILRDFVGEEIDRVRIDSRLNF
SLIQKFTHDFVPELEDKIECYRGKSPIFDLFDVENEVQRALERKVELKSGGYLIIDQTEAMTTVDINTGAFVGHRNLEET
IFNTNIEATQAIARQLRLRNLGGIIIIDFIDMQSVEHKRRVFNSLEQALSKDRVKTNINDFSPLGLIEMTRKRTQESLEH
IFCGVCEQCSGRGYIKTVETVCYEVLREILRVNRAYDADRFVVYTSPKVAEALTGDESHNLAELVLFMEKPVKINAEPLY
GQEQFDVVMM

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=492, Percent_Identity=71.9512195121951, Blast_Score=715, Evalue=0.0,
Organism=Escherichia coli, GI1787325, Length=431, Percent_Identity=37.8190255220418, Blast_Score=275, Evalue=5e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 55443; Mature: 55312

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVELLMNITPTETRVALVEGGVLQELHIERQATKGIVGNIYKGKVSRVLAGMQAAFVDI
CCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHH
GLEKAAFLHASDIVPFTECVAKNEKAKFKVADISQLVRPGQDIMVQVVKDPLGTKGARLT
CCHHHHHHHHCCCCHHHHHHCCCCCCEEEHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEE
TDITLPSRYLVFMPGTGHVGVSQRIESAQERERLKVIAQGCCVNDLGGFIIRTAADGAPE
EEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCEEEEECCCCCCH
KELINDAAFLLRVWRKVLTRRKRTASKNRLLYRDLGLAFRILRDFVGEEIDRVRIDSRLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHEECCCCCC
FSLIQKFTHDFVPELEDKIECYRGKSPIFDLFDVENEVQRALERKVELKSGGYLIIDQTE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHEECCCCEEEEECCC
AMTTVDINTGAFVGHRNLEETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMQSVEHKR
CEEEEECCCCCEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH
RVFNSLEQALSKDRVKTNINDFSPLGLIEMTRKRTQESLEHIFCGVCEQCSGRGYIKTVE
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
TVCYEVLREILRVNRAYDADRFVVYTSPKVAEALTGDESHNLAELVLFMEKPVKINAEPL
HHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHCCCCCCCHHHHHHHHCCCCEECCCCC
YGQEQFDVVMM
CCCCCCCEEEC
>Mature Secondary Structure 
SVELLMNITPTETRVALVEGGVLQELHIERQATKGIVGNIYKGKVSRVLAGMQAAFVDI
CEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHH
GLEKAAFLHASDIVPFTECVAKNEKAKFKVADISQLVRPGQDIMVQVVKDPLGTKGARLT
CCHHHHHHHHCCCCHHHHHHCCCCCCEEEHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEE
TDITLPSRYLVFMPGTGHVGVSQRIESAQERERLKVIAQGCCVNDLGGFIIRTAADGAPE
EEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCEEEEECCCCCCH
KELINDAAFLLRVWRKVLTRRKRTASKNRLLYRDLGLAFRILRDFVGEEIDRVRIDSRLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHEECCCCCC
FSLIQKFTHDFVPELEDKIECYRGKSPIFDLFDVENEVQRALERKVELKSGGYLIIDQTE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHEECCCCEEEEECCC
AMTTVDINTGAFVGHRNLEETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMQSVEHKR
CEEEEECCCCCEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH
RVFNSLEQALSKDRVKTNINDFSPLGLIEMTRKRTQESLEHIFCGVCEQCSGRGYIKTVE
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
TVCYEVLREILRVNRAYDADRFVVYTSPKVAEALTGDESHNLAELVLFMEKPVKINAEPL
HHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHCCCCCCCHHHHHHHHCCCCEECCCCC
YGQEQFDVVMM
CCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]