| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is yceF2 [H]
Identifier: 119944881
GI number: 119944881
Start: 1409094
End: 1409672
Strand: Direct
Name: yceF2 [H]
Synonym: Ping_1125
Alternate gene names: 119944881
Gene position: 1409094-1409672 (Clockwise)
Preceding gene: 119944880
Following gene: 119944882
Centisome position: 30.9
GC content: 39.55
Gene sequence:
>579_bases ATGAACGTTTCTATCTATCTTGCATCGAGTTCACCTCGTCGTAGTGAACTTCTAAATCAAATTGGAGTCTTATTTGATCG AGTGAAAGCTGCCATTGAAGAAAAACCGGAAACAGGTGAATCAGCGCAGGATTATGTTTTACGTTTAGCATTACAAAAAG CGCAAGCAGGTTTCAAAAATAGCGATAAAGAGAGACCCGTTTTAGGGGCTGATACAATTATTGTTATTGATCAAAAAATA TTAGAAAAACCACGTGATAAAAAACATGCCCGGGAGATGCTGCAATTATTGTCGGGGCGAGTTCATCAAGTCTTTACTGC AGTGGCACTGGTACAAGGTGTTTATACAAAAAGTACTCTGGTTAAAACCGAGGTGAGTTTTAAAAAATTGAGTGAGCAGG ATATCTCTGATTACTGGCGCTCCGGTGAACCTGTTGGTAAGGCTGCTGGTTATGCTATTCAAGGAATTGCCGGAAAGTTC ATTAACAATATATCAGGTAGTTATAGTGGCGTTGTTGGGCTGCCGCTTTTTGAAACAGCAGAACTGATTCGTGAGTTTAT GGAAGAAGTTAATCATTAA
Upstream 100 bases:
>100_bases ATCAATCTTATTTCTGGTCAGTCTTTACCTCGATGCTGGTTTGGCCCTGGTTTTTTCTTTTTTTGCGTTTTATTCGTCGC CGTTTTAAGGTCGTATAAGC
Downstream 100 bases:
>100_bases GATAAAATTTATAAATGAAATTAATAAATGCTGTTGAGAACGCTTTCTTTGATTGTAAACTTGCCCGTTTGATTTTTTTG TTATGGCACCAATTTGCAAG
Product: maf protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MNVSIYLASSSPRRSELLNQIGVLFDRVKAAIEEKPETGESAQDYVLRLALQKAQAGFKNSDKERPVLGADTIIVIDQKI LEKPRDKKHAREMLQLLSGRVHQVFTAVALVQGVYTKSTLVKTEVSFKKLSEQDISDYWRSGEPVGKAAGYAIQGIAGKF INNISGSYSGVVGLPLFETAELIREFMEEVNH
Sequences:
>Translated_192_residues MNVSIYLASSSPRRSELLNQIGVLFDRVKAAIEEKPETGESAQDYVLRLALQKAQAGFKNSDKERPVLGADTIIVIDQKI LEKPRDKKHAREMLQLLSGRVHQVFTAVALVQGVYTKSTLVKTEVSFKKLSEQDISDYWRSGEPVGKAAGYAIQGIAGKF INNISGSYSGVVGLPLFETAELIREFMEEVNH >Mature_192_residues MNVSIYLASSSPRRSELLNQIGVLFDRVKAAIEEKPETGESAQDYVLRLALQKAQAGFKNSDKERPVLGADTIIVIDQKI LEKPRDKKHAREMLQLLSGRVHQVFTAVALVQGVYTKSTLVKTEVSFKKLSEQDISDYWRSGEPVGKAAGYAIQGIAGKF INNISGSYSGVVGLPLFETAELIREFMEEVNH
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family [H]
Homologues:
Organism=Homo sapiens, GI117553627, Length=191, Percent_Identity=38.7434554973822, Blast_Score=117, Evalue=9e-27, Organism=Homo sapiens, GI291045183, Length=184, Percent_Identity=35.3260869565217, Blast_Score=101, Evalue=3e-22, Organism=Homo sapiens, GI291045181, Length=145, Percent_Identity=40, Blast_Score=98, Evalue=4e-21, Organism=Homo sapiens, GI310133124, Length=129, Percent_Identity=42.6356589147287, Blast_Score=97, Evalue=1e-20, Organism=Escherichia coli, GI1789646, Length=183, Percent_Identity=53.551912568306, Blast_Score=203, Evalue=7e-54, Organism=Escherichia coli, GI87081830, Length=183, Percent_Identity=29.5081967213115, Blast_Score=90, Evalue=1e-19, Organism=Caenorhabditis elegans, GI193202443, Length=180, Percent_Identity=34.4444444444444, Blast_Score=84, Evalue=3e-17, Organism=Drosophila melanogaster, GI78706856, Length=198, Percent_Identity=34.3434343434343, Blast_Score=103, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003697 [H]
Pfam domain/function: PF02545 Maf [H]
EC number: NA
Molecular weight: Translated: 21269; Mature: 21269
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVSIYLASSSPRRSELLNQIGVLFDRVKAAIEEKPETGESAQDYVLRLALQKAQAGFKN CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC SDKERPVLGADTIIVIDQKILEKPRDKKHAREMLQLLSGRVHQVFTAVALVQGVYTKSTL CCCCCCCCCCCEEEEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKTEVSFKKLSEQDISDYWRSGEPVGKAAGYAIQGIAGKFINNISGSYSGVVGLPLFETA HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHH ELIREFMEEVNH HHHHHHHHHHCC >Mature Secondary Structure MNVSIYLASSSPRRSELLNQIGVLFDRVKAAIEEKPETGESAQDYVLRLALQKAQAGFKN CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC SDKERPVLGADTIIVIDQKILEKPRDKKHAREMLQLLSGRVHQVFTAVALVQGVYTKSTL CCCCCCCCCCCEEEEECHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKTEVSFKKLSEQDISDYWRSGEPVGKAAGYAIQGIAGKFINNISGSYSGVVGLPLFETA HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHH ELIREFMEEVNH HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA