Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is dhfrIII [H]
Identifier: 119944803
GI number: 119944803
Start: 1318477
End: 1318968
Strand: Direct
Name: dhfrIII [H]
Synonym: Ping_1045
Alternate gene names: 119944803
Gene position: 1318477-1318968 (Clockwise)
Preceding gene: 119944798
Following gene: 119944809
Centisome position: 28.92
GC content: 40.85
Gene sequence:
>492_bases ATGAAAATTTCAATGATTGTTGCGATGTCGGAGAATAGGGTAATTGGTTTGGATAATAAAATGCCATGGCATTTACCTGC CGATTTAATGTTTTTTAAACGAGTCACATTAGGTAAACCCATTATTATGGGGCGGAAAACCTTCGAGTCAATCGGGCGGC CGTTACCTGGAAGAAAAAACATAGTACTAAGCCGTGATAAAAATCTTCACATAGAGGGGGTTTGCTGCGTGCAAACTGTT GAGCAGGCACTCGCACTGGTGGAAGATTGTGATGAAGTCATGGTGATCGGTGGAGCGACGATTTATGAGCAGTTTTTACC ACAAGCAAGCCGTTTATATATTACTTTTATCGATTTAAAAACAGCGGGTGACACACACTTTCCCGATTATAAAATGATTG CCGATTGGCGAGAAGTACAGAAAGAAGCGCATCAGAGCGATGCGCAAAACAGTTATAATTATCAATTTATAACATTGGAC CGAGTAAGCTGA
Upstream 100 bases:
>100_bases ATGCAGTTTTATCAGATAGTATCAGCATAAGTAAAGAGAAAATAAGTGGATTTGGTATTCTATGGTAATCTTCCTGCAAA ATAGTTGAACAGGGTGAGTT
Downstream 100 bases:
>100_bases TTTATTTACTGTGAACTCTCTGGCGTTGGCAAGCAAAAGAAAACATTTTTTTATCTTGCCAACGTAACATACTCAGGCTA TTTCCCCAGACGCATCCGGT
Product: dihydrofolate reductase
Products: NA
Alternate protein names: Dihydrofolate reductase type III [H]
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MKISMIVAMSENRVIGLDNKMPWHLPADLMFFKRVTLGKPIIMGRKTFESIGRPLPGRKNIVLSRDKNLHIEGVCCVQTV EQALALVEDCDEVMVIGGATIYEQFLPQASRLYITFIDLKTAGDTHFPDYKMIADWREVQKEAHQSDAQNSYNYQFITLD RVS
Sequences:
>Translated_163_residues MKISMIVAMSENRVIGLDNKMPWHLPADLMFFKRVTLGKPIIMGRKTFESIGRPLPGRKNIVLSRDKNLHIEGVCCVQTV EQALALVEDCDEVMVIGGATIYEQFLPQASRLYITFIDLKTAGDTHFPDYKMIADWREVQKEAHQSDAQNSYNYQFITLD RVS >Mature_163_residues MKISMIVAMSENRVIGLDNKMPWHLPADLMFFKRVTLGKPIIMGRKTFESIGRPLPGRKNIVLSRDKNLHIEGVCCVQTV EQALALVEDCDEVMVIGGATIYEQFLPQASRLYITFIDLKTAGDTHFPDYKMIADWREVQKEAHQSDAQNSYNYQFITLD RVS
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Homo sapiens, GI4503323, Length=179, Percent_Identity=30.7262569832402, Blast_Score=69, Evalue=3e-12, Organism=Escherichia coli, GI1786233, Length=159, Percent_Identity=56.6037735849057, Blast_Score=187, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17505899, Length=178, Percent_Identity=29.7752808988764, Blast_Score=63, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6324810, Length=136, Percent_Identity=32.3529411764706, Blast_Score=65, Evalue=7e-12, Organism=Drosophila melanogaster, GI116008026, Length=185, Percent_Identity=32.972972972973, Blast_Score=81, Evalue=3e-16, Organism=Drosophila melanogaster, GI24647458, Length=185, Percent_Identity=32.972972972973, Blast_Score=81, Evalue=3e-16,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 18624; Mature: 18624
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS00075 DHFR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISMIVAMSENRVIGLDNKMPWHLPADLMFFKRVTLGKPIIMGRKTFESIGRPLPGRKN CEEEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHHCCCCCCCCC IVLSRDKNLHIEGVCCVQTVEQALALVEDCDEVMVIGGATIYEQFLPQASRLYITFIDLK EEEECCCCEEEEEEHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCEEEEEEEEEE TAGDTHFPDYKMIADWREVQKEAHQSDAQNSYNYQFITLDRVS ECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC >Mature Secondary Structure MKISMIVAMSENRVIGLDNKMPWHLPADLMFFKRVTLGKPIIMGRKTFESIGRPLPGRKN CEEEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHHCCCCCCCCC IVLSRDKNLHIEGVCCVQTVEQALALVEDCDEVMVIGGATIYEQFLPQASRLYITFIDLK EEEECCCCEEEEEEHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCEEEEEEEEEE TAGDTHFPDYKMIADWREVQKEAHQSDAQNSYNYQFITLDRVS ECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2840679; 6371010 [H]