| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944665
Identifier: 119944665
GI number: 119944665
Start: 1133407
End: 1134345
Strand: Direct
Name: 119944665
Synonym: Ping_0904
Alternate gene names: NA
Gene position: 1133407-1134345 (Clockwise)
Preceding gene: 119944664
Following gene: 119944666
Centisome position: 24.86
GC content: 44.3
Gene sequence:
>939_bases ATGAAAACTAACATGTTATTTATTTTAGGGCTGAGTTTTTTGCTTCTCGCCTGCGGAGACGAGCGTCCCGAAAAACTTCA GGCTAATACTCGAACAGCCGAATATTTAACAACTAATCTGGGCGAAAATCTTGATACAAAGGCATTAGCTAATGCGGCTA TTTTAAGTGAATATGCAAGACTGTTAAGTGAAGATAAACCGCAACTTAAACCTTTATTAACTGCATTAAGTCGTGATGCA ACGCGCCAAGGGCCTATGTATCAAGGTCTGCTGCAGCGTTTAAAAACCCTTAAAGAGCAGCCTCAGGTACTGGGCGATAT TGAGGCGCAGCTATTTGAAAGTGAAAATCTTATTGCAGCATCGGATCCGGCTTTATTTAATGATGCCTTATCGGATCCCA TTAATGTGATTGCTGATCTGTCCCAAGGAGAATTAGCCCGGGTTAATGCCATCAGCAAGCAGCAGAGTCTGCAGGCAAAT GCGGCTGCAGATAATGGCGCTGGCAGTCAGTTAGTGGGTAATCCCGGTTACGGGCAATGGCAAACTAATAGTGGCGGTAC CTCATTTTGGCAGTGGTATGGCATGTACTCCATGTTTTCAGCTCTTTCCCCAAACCGCACTCGCTATGATAGCTGGTCAT CACGCCGAGATTACAGTTATTATAATGATGTAGGCCGTAACCGTTATACCTCACCACAACAAGTAAAATCTCAGGATAAT TTAGCCGCCAGAACCAAAAAAAAATTTGCCAATAAGGGCGGTTTTCGAAGCCCCTATGCAAAATCTAAAACGGGGGCAAG CCGTATGTCGACTTCCAGTCGTCAGGCGCAGCAAACAACCTCTTTTGCGGGAAAGTCTAGTTACTCAAAAGCAAAGTCAT CGAGCAGTTTTAGAAATAGCAAAACAACGACCTCTCGCGGTATAAGTCGCGGAAAATAA
Upstream 100 bases:
>100_bases AAATTCACGTTGAGCAGGCAAATAAAATCCCACCACCTGGAATCGATACTCAGGATGATTTGCAGCGTGTTATTGATTGT TTATCGCACTAGGAAACGCA
Downstream 100 bases:
>100_bases GGCTAAAAAAATATGAATGAATTAATGGCAACATTAGAGCAAAACGGCAGTTTGGTCATTTACTTATTAATTGATATGGC AGTTGCGATTCTTTTATTAG
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MKTNMLFILGLSFLLLACGDERPEKLQANTRTAEYLTTNLGENLDTKALANAAILSEYARLLSEDKPQLKPLLTALSRDA TRQGPMYQGLLQRLKTLKEQPQVLGDIEAQLFESENLIAASDPALFNDALSDPINVIADLSQGELARVNAISKQQSLQAN AAADNGAGSQLVGNPGYGQWQTNSGGTSFWQWYGMYSMFSALSPNRTRYDSWSSRRDYSYYNDVGRNRYTSPQQVKSQDN LAARTKKKFANKGGFRSPYAKSKTGASRMSTSSRQAQQTTSFAGKSSYSKAKSSSSFRNSKTTTSRGISRGK
Sequences:
>Translated_312_residues MKTNMLFILGLSFLLLACGDERPEKLQANTRTAEYLTTNLGENLDTKALANAAILSEYARLLSEDKPQLKPLLTALSRDA TRQGPMYQGLLQRLKTLKEQPQVLGDIEAQLFESENLIAASDPALFNDALSDPINVIADLSQGELARVNAISKQQSLQAN AAADNGAGSQLVGNPGYGQWQTNSGGTSFWQWYGMYSMFSALSPNRTRYDSWSSRRDYSYYNDVGRNRYTSPQQVKSQDN LAARTKKKFANKGGFRSPYAKSKTGASRMSTSSRQAQQTTSFAGKSSYSKAKSSSSFRNSKTTTSRGISRGK >Mature_312_residues MKTNMLFILGLSFLLLACGDERPEKLQANTRTAEYLTTNLGENLDTKALANAAILSEYARLLSEDKPQLKPLLTALSRDA TRQGPMYQGLLQRLKTLKEQPQVLGDIEAQLFESENLIAASDPALFNDALSDPINVIADLSQGELARVNAISKQQSLQAN AAADNGAGSQLVGNPGYGQWQTNSGGTSFWQWYGMYSMFSALSPNRTRYDSWSSRRDYSYYNDVGRNRYTSPQQVKSQDN LAARTKKKFANKGGFRSPYAKSKTGASRMSTSSRQAQQTTSFAGKSSYSKAKSSSSFRNSKTTTSRGISRGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34304; Mature: 34304
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNMLFILGLSFLLLACGDERPEKLQANTRTAEYLTTNLGENLDTKALANAAILSEYAR CCCCHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LLSEDKPQLKPLLTALSRDATRQGPMYQGLLQRLKTLKEQPQVLGDIEAQLFESENLIAA HHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC SDPALFNDALSDPINVIADLSQGELARVNAISKQQSLQANAAADNGAGSQLVGNPGYGQW CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCE QTNSGGTSFWQWYGMYSMFSALSPNRTRYDSWSSRRDYSYYNDVGRNRYTSPQQVKSQDN ECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHH LAARTKKKFANKGGFRSPYAKSKTGASRMSTSSRQAQQTTSFAGKSSYSKAKSSSSFRNS HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC KTTTSRGISRGK CCHHHCCCCCCC >Mature Secondary Structure MKTNMLFILGLSFLLLACGDERPEKLQANTRTAEYLTTNLGENLDTKALANAAILSEYAR CCCCHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LLSEDKPQLKPLLTALSRDATRQGPMYQGLLQRLKTLKEQPQVLGDIEAQLFESENLIAA HHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC SDPALFNDALSDPINVIADLSQGELARVNAISKQQSLQANAAADNGAGSQLVGNPGYGQW CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCE QTNSGGTSFWQWYGMYSMFSALSPNRTRYDSWSSRRDYSYYNDVGRNRYTSPQQVKSQDN ECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHH LAARTKKKFANKGGFRSPYAKSKTGASRMSTSSRQAQQTTSFAGKSSYSKAKSSSSFRNS HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC KTTTSRGISRGK CCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA