| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is srmB [H]
Identifier: 119944643
GI number: 119944643
Start: 1103992
End: 1105311
Strand: Direct
Name: srmB [H]
Synonym: Ping_0882
Alternate gene names: 119944643
Gene position: 1103992-1105311 (Clockwise)
Preceding gene: 119944642
Following gene: 119944644
Centisome position: 24.21
GC content: 40.38
Gene sequence:
>1320_bases TTGCTGATCGATGATTTACCCGTTGACCGCCGTTTAATCATTTCGTTATCCCACCTTGGATTTACTGAAACCACAGAAAT TCAAGCTAAAGCCGTTCCCATTGCCGTTGCTGGGAAAGATTTACTGGCATCATCAAAAACCGGGTCGGGTAAAACATTAG CATATTTGCTACCTGCTATGCAGCGCGTTTTAAAAACACGGGCATTAACCAAACGTGATCCGCGTGTTTTAATATTAACG CCAACACGTGAGCTTGCAAAACAGGTTTATGCACAATTGCGTTTATTAGTGTCAAATACCAGTTTGAAATCAACCCTAGT ATCAGGGGGAGAAAACTTTAATGATCAAGTTAAAGCGCTGGATAAAGACCCGCATTTTGTTGTTGGAACACCAGGACGAA TTGTTGATCATTTAAAAAAAGGGTTGTTACATTTAGAAGGCTTAGAGTTATTAATTTTAGATGAAGCAGATCGTATGTTG GATTTAGGCTTTGCAGAGCAATTAAAGGCGGTTAACTCGGCAGCGAACCATCGTTTGCGCCAAACATTGTTATTTTCAGC CACCTTAGGGCATGCCGAAGTTAATGAATTTGCCAGTGAATTATTAAAAGCACCCGTACGTATTGCTATTGGTGAAGAAA ATCAGCAGCACAGTGAAATTTCACAGCGTTTTTATCTGGCAGATAACTTAAATCAAAAAGAAAAATTACTTTTCCATTTT ATAAAAAATGAAGAAATTAAGCAGGCTATTATCTTCACCGCAACGCGTCTGGATGCACAGCGTCTAAGTGCTGCTTTAAG TGAAAAAGGCTATGGTACTTTGGCCCTGCATGGCGATTTAACGCAGAATAACCGTAACAGCATTATGGACAGTTTTTCCC GTGGTAAAGCCCAGCTATTAGTGACAACGGATATCGCCTCCCGCGGATTAGATTTACTCAATGTCAGTCATGTGATTAAT TTTGATATCCCTAAACATACGGAAGAGTATATTCATCGGATAGGCCGGACAGGTCGCGCAGGTGAGAAGGGGGATGCGAT TTCAATTATTGGCCCTAAAGACTGGGTAAACTTTAAAAAAGTCGAAGAGTTTGTGCAGCGACAGTTAACTTTTAACCGTG TTGATGGCATTAAACCTCAATTTAAAGGTATTGTTGAAAAAGTAGTTAAGGCACCAGAAACTAAAGTTGTCAGTCATAAA GCTGAAAAGAAACAGAGCAGTAAAACGCGTAAACCTAAAGCTGCCCCCAACAAAATTTTCCATGAAGCGGAAGAGGCTGG TTTTACACCGATGCGCCGTAAGAAAAAGATTGAAGAATAG
Upstream 100 bases:
>100_bases AAGAGATTAATTGCCGCACAATGTAAATTTTTTTTCTTCTTTTGGTGCTTAATCGTTATACTACTCAGATTATTACTAAT ATTGCCTTTTGGAGAGTACT
Downstream 100 bases:
>100_bases AAACAAAGAGTAGTTCGCTATGCTTAATCACTAAAGGAATTAAACTGGGGTAATAACATTGCCGCAGTATTCAGTGGTTT CTTGAACGACCAAAAAGTCA
Product: ATP-dependent RNA helicase, DEAD box family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MLIDDLPVDRRLIISLSHLGFTETTEIQAKAVPIAVAGKDLLASSKTGSGKTLAYLLPAMQRVLKTRALTKRDPRVLILT PTRELAKQVYAQLRLLVSNTSLKSTLVSGGENFNDQVKALDKDPHFVVGTPGRIVDHLKKGLLHLEGLELLILDEADRML DLGFAEQLKAVNSAANHRLRQTLLFSATLGHAEVNEFASELLKAPVRIAIGEENQQHSEISQRFYLADNLNQKEKLLFHF IKNEEIKQAIIFTATRLDAQRLSAALSEKGYGTLALHGDLTQNNRNSIMDSFSRGKAQLLVTTDIASRGLDLLNVSHVIN FDIPKHTEEYIHRIGRTGRAGEKGDAISIIGPKDWVNFKKVEEFVQRQLTFNRVDGIKPQFKGIVEKVVKAPETKVVSHK AEKKQSSKTRKPKAAPNKIFHEAEEAGFTPMRRKKKIEE
Sequences:
>Translated_439_residues MLIDDLPVDRRLIISLSHLGFTETTEIQAKAVPIAVAGKDLLASSKTGSGKTLAYLLPAMQRVLKTRALTKRDPRVLILT PTRELAKQVYAQLRLLVSNTSLKSTLVSGGENFNDQVKALDKDPHFVVGTPGRIVDHLKKGLLHLEGLELLILDEADRML DLGFAEQLKAVNSAANHRLRQTLLFSATLGHAEVNEFASELLKAPVRIAIGEENQQHSEISQRFYLADNLNQKEKLLFHF IKNEEIKQAIIFTATRLDAQRLSAALSEKGYGTLALHGDLTQNNRNSIMDSFSRGKAQLLVTTDIASRGLDLLNVSHVIN FDIPKHTEEYIHRIGRTGRAGEKGDAISIIGPKDWVNFKKVEEFVQRQLTFNRVDGIKPQFKGIVEKVVKAPETKVVSHK AEKKQSSKTRKPKAAPNKIFHEAEEAGFTPMRRKKKIEE >Mature_439_residues MLIDDLPVDRRLIISLSHLGFTETTEIQAKAVPIAVAGKDLLASSKTGSGKTLAYLLPAMQRVLKTRALTKRDPRVLILT PTRELAKQVYAQLRLLVSNTSLKSTLVSGGENFNDQVKALDKDPHFVVGTPGRIVDHLKKGLLHLEGLELLILDEADRML DLGFAEQLKAVNSAANHRLRQTLLFSATLGHAEVNEFASELLKAPVRIAIGEENQQHSEISQRFYLADNLNQKEKLLFHF IKNEEIKQAIIFTATRLDAQRLSAALSEKGYGTLALHGDLTQNNRNSIMDSFSRGKAQLLVTTDIASRGLDLLNVSHVIN FDIPKHTEEYIHRIGRTGRAGEKGDAISIIGPKDWVNFKKVEEFVQRQLTFNRVDGIKPQFKGIVEKVVKAPETKVVSHK AEKKQSSKTRKPKAAPNKIFHEAEEAGFTPMRRKKKIEE
Specific function: RNA-dependent ATPase activity. Acts in 50S ribosomal subunit biogenesis at low temperatures, acting before DeaD/CsdA. Suppressor of a mutant defective in 50S ribosomal subunit assembly. Probably interacts with 23S ribosomal RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI45446747, Length=355, Percent_Identity=36.3380281690141, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI45446743, Length=355, Percent_Identity=36.3380281690141, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI4758138, Length=349, Percent_Identity=38.3954154727794, Blast_Score=236, Evalue=2e-62, Organism=Homo sapiens, GI20149629, Length=370, Percent_Identity=36.2162162162162, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI148613856, Length=352, Percent_Identity=37.5, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI38201710, Length=352, Percent_Identity=37.5, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI169881239, Length=351, Percent_Identity=35.3276353276353, Blast_Score=232, Evalue=4e-61, Organism=Homo sapiens, GI13514809, Length=351, Percent_Identity=35.3276353276353, Blast_Score=232, Evalue=4e-61, Organism=Homo sapiens, GI262118318, Length=345, Percent_Identity=35.0724637681159, Blast_Score=232, Evalue=5e-61, Organism=Homo sapiens, GI224593278, Length=362, Percent_Identity=36.4640883977901, Blast_Score=231, Evalue=7e-61, Organism=Homo sapiens, GI216548263, Length=345, Percent_Identity=35.0724637681159, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI262231852, Length=345, Percent_Identity=35.0724637681159, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI13518015, Length=345, Percent_Identity=35.0724637681159, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI87196351, Length=357, Percent_Identity=35.2941176470588, Blast_Score=229, Evalue=3e-60, Organism=Homo sapiens, GI301171467, Length=357, Percent_Identity=35.2941176470588, Blast_Score=229, Evalue=3e-60, Organism=Homo sapiens, GI301171475, Length=357, Percent_Identity=35.2941176470588, Blast_Score=229, Evalue=3e-60, Organism=Homo sapiens, GI222352149, Length=405, Percent_Identity=34.0740740740741, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI164664518, Length=368, Percent_Identity=34.7826086956522, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI7661920, Length=370, Percent_Identity=33.5135135135135, Blast_Score=218, Evalue=9e-57, Organism=Homo sapiens, GI41327773, Length=348, Percent_Identity=35.3448275862069, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI13514831, Length=354, Percent_Identity=35.3107344632768, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI188035877, Length=341, Percent_Identity=36.0703812316716, Blast_Score=215, Evalue=5e-56, Organism=Homo sapiens, GI38327634, Length=390, Percent_Identity=32.5641025641026, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI164419743, Length=358, Percent_Identity=35.7541899441341, Blast_Score=208, Evalue=9e-54, Organism=Homo sapiens, GI31542656, Length=384, Percent_Identity=35.4166666666667, Blast_Score=208, Evalue=1e-53, Organism=Homo sapiens, GI51094101, Length=358, Percent_Identity=35.7541899441341, Blast_Score=208, Evalue=1e-53, Organism=Homo sapiens, GI21071032, Length=342, Percent_Identity=35.672514619883, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI41327771, Length=380, Percent_Identity=31.5789473684211, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI41327776, Length=370, Percent_Identity=33.5135135135135, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI55749865, Length=347, Percent_Identity=33.4293948126801, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI13129006, Length=383, Percent_Identity=33.420365535248, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI50659095, Length=370, Percent_Identity=35.1351351351351, Blast_Score=191, Evalue=8e-49, Organism=Homo sapiens, GI4503529, Length=362, Percent_Identity=32.8729281767956, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI83700235, Length=362, Percent_Identity=32.8729281767956, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI9506931, Length=393, Percent_Identity=32.5699745547074, Blast_Score=182, Evalue=5e-46, Organism=Homo sapiens, GI17505907, Length=396, Percent_Identity=31.8181818181818, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI41327779, Length=372, Percent_Identity=30.3763440860215, Blast_Score=176, Evalue=5e-44, Organism=Homo sapiens, GI8922886, Length=387, Percent_Identity=30.749354005168, Blast_Score=172, Evalue=6e-43, Organism=Homo sapiens, GI38569503, Length=370, Percent_Identity=30.2702702702703, Blast_Score=172, Evalue=7e-43, Organism=Homo sapiens, GI38569505, Length=370, Percent_Identity=30.2702702702703, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI164419732, Length=358, Percent_Identity=32.9608938547486, Blast_Score=169, Evalue=3e-42, Organism=Homo sapiens, GI21040371, Length=343, Percent_Identity=29.1545189504373, Blast_Score=168, Evalue=9e-42, Organism=Homo sapiens, GI6005743, Length=387, Percent_Identity=30.2325581395349, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI62241022, Length=375, Percent_Identity=30.9333333333333, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI4758112, Length=343, Percent_Identity=29.7376093294461, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI18375623, Length=343, Percent_Identity=29.7376093294461, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI62241024, Length=350, Percent_Identity=30.8571428571429, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI9966805, Length=324, Percent_Identity=31.7901234567901, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI256223453, Length=357, Percent_Identity=29.4117647058824, Blast_Score=153, Evalue=4e-37, Organism=Homo sapiens, GI154759257, Length=414, Percent_Identity=28.2608695652174, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI4826686, Length=366, Percent_Identity=27.5956284153005, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI256773275, Length=376, Percent_Identity=30.5851063829787, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI20336298, Length=269, Percent_Identity=32.7137546468402, Blast_Score=122, Evalue=8e-28, Organism=Escherichia coli, GI1788930, Length=383, Percent_Identity=39.4255874673629, Blast_Score=275, Evalue=4e-75, Organism=Escherichia coli, GI1787016, Length=381, Percent_Identity=34.9081364829396, Blast_Score=244, Evalue=8e-66, Organism=Escherichia coli, GI1790214, Length=377, Percent_Identity=35.5437665782493, Blast_Score=241, Evalue=7e-65, Organism=Escherichia coli, GI1787605, Length=362, Percent_Identity=38.121546961326, Blast_Score=235, Evalue=3e-63, Organism=Escherichia coli, GI87082221, Length=350, Percent_Identity=36.8571428571429, Blast_Score=229, Evalue=2e-61, Organism=Escherichia coli, GI48994977, Length=370, Percent_Identity=25.6756756756757, Blast_Score=86, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17555296, Length=430, Percent_Identity=33.7209302325581, Blast_Score=234, Evalue=5e-62, Organism=Caenorhabditis elegans, GI115533224, Length=335, Percent_Identity=39.1044776119403, Blast_Score=228, Evalue=5e-60, Organism=Caenorhabditis elegans, GI71995718, Length=370, Percent_Identity=35.1351351351351, Blast_Score=227, Evalue=8e-60, Organism=Caenorhabditis elegans, GI17510559, Length=375, Percent_Identity=34.6666666666667, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI17552642, Length=349, Percent_Identity=36.676217765043, Blast_Score=224, Evalue=5e-59, Organism=Caenorhabditis elegans, GI17510309, Length=350, Percent_Identity=34.8571428571429, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17510307, Length=350, Percent_Identity=34.8571428571429, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI71995514, Length=350, Percent_Identity=34.8571428571429, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17507121, Length=362, Percent_Identity=34.5303867403315, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI71995724, Length=362, Percent_Identity=34.2541436464088, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI86570094, Length=353, Percent_Identity=37.3937677053824, Blast_Score=218, Evalue=7e-57, Organism=Caenorhabditis elegans, GI71987143, Length=371, Percent_Identity=33.4231805929919, Blast_Score=215, Evalue=3e-56, Organism=Caenorhabditis elegans, GI17507945, Length=344, Percent_Identity=34.0116279069767, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17507877, Length=357, Percent_Identity=35.8543417366947, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17507881, Length=373, Percent_Identity=35.3887399463807, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17507879, Length=357, Percent_Identity=36.4145658263305, Blast_Score=205, Evalue=3e-53, Organism=Caenorhabditis elegans, GI32565321, Length=369, Percent_Identity=32.7913279132791, Blast_Score=205, Evalue=4e-53, Organism=Caenorhabditis elegans, GI17552114, Length=361, Percent_Identity=32.6869806094183, Blast_Score=201, Evalue=7e-52, Organism=Caenorhabditis elegans, GI17537549, Length=360, Percent_Identity=33.8888888888889, Blast_Score=201, Evalue=8e-52, Organism=Caenorhabditis elegans, GI17509811, Length=360, Percent_Identity=31.1111111111111, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17505370, Length=391, Percent_Identity=33.5038363171356, Blast_Score=191, Evalue=4e-49, Organism=Caenorhabditis elegans, GI115532546, Length=357, Percent_Identity=31.9327731092437, Blast_Score=188, Evalue=6e-48, Organism=Caenorhabditis elegans, GI115532548, Length=366, Percent_Identity=31.4207650273224, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI71999646, Length=346, Percent_Identity=32.3699421965318, Blast_Score=184, Evalue=9e-47, Organism=Caenorhabditis elegans, GI71999644, Length=346, Percent_Identity=32.3699421965318, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI17508543, Length=375, Percent_Identity=31.2, Blast_Score=174, Evalue=6e-44, Organism=Caenorhabditis elegans, GI17507641, Length=444, Percent_Identity=29.5045045045045, Blast_Score=171, Evalue=5e-43, Organism=Caenorhabditis elegans, GI32564046, Length=438, Percent_Identity=29.6803652968037, Blast_Score=168, Evalue=6e-42, Organism=Caenorhabditis elegans, GI71990816, Length=369, Percent_Identity=31.4363143631436, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI17556951, Length=329, Percent_Identity=31.0030395136778, Blast_Score=164, Evalue=8e-41, Organism=Caenorhabditis elegans, GI71982858, Length=340, Percent_Identity=28.2352941176471, Blast_Score=157, Evalue=7e-39, Organism=Caenorhabditis elegans, GI193208216, Length=384, Percent_Identity=31.7708333333333, Blast_Score=155, Evalue=3e-38, Organism=Caenorhabditis elegans, GI193206561, Length=351, Percent_Identity=27.0655270655271, Blast_Score=150, Evalue=1e-36, Organism=Caenorhabditis elegans, GI17536099, Length=383, Percent_Identity=29.242819843342, Blast_Score=149, Evalue=4e-36, Organism=Caenorhabditis elegans, GI17536101, Length=383, Percent_Identity=29.242819843342, Blast_Score=148, Evalue=6e-36, Organism=Caenorhabditis elegans, GI17536103, Length=383, Percent_Identity=29.242819843342, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17553716, Length=351, Percent_Identity=28.7749287749288, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI25148203, Length=411, Percent_Identity=24.5742092457421, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI25148291, Length=328, Percent_Identity=26.8292682926829, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI71997889, Length=364, Percent_Identity=28.021978021978, Blast_Score=114, Evalue=9e-26, Organism=Caenorhabditis elegans, GI25148205, Length=337, Percent_Identity=23.7388724035608, Blast_Score=103, Evalue=3e-22, Organism=Caenorhabditis elegans, GI71987152, Length=104, Percent_Identity=43.2692307692308, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17557982, Length=390, Percent_Identity=24.6153846153846, Blast_Score=96, Evalue=5e-20, Organism=Caenorhabditis elegans, GI71982862, Length=179, Percent_Identity=29.0502793296089, Blast_Score=83, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6321856, Length=368, Percent_Identity=37.5, Blast_Score=236, Evalue=4e-63, Organism=Saccharomyces cerevisiae, GI6321360, Length=353, Percent_Identity=39.0934844192635, Blast_Score=235, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6324217, Length=339, Percent_Identity=37.4631268436578, Blast_Score=233, Evalue=4e-62, Organism=Saccharomyces cerevisiae, GI6325138, Length=358, Percent_Identity=34.9162011173184, Blast_Score=229, Evalue=7e-61, Organism=Saccharomyces cerevisiae, GI6324778, Length=358, Percent_Identity=34.6368715083799, Blast_Score=227, Evalue=3e-60, Organism=Saccharomyces cerevisiae, GI6323021, Length=354, Percent_Identity=36.7231638418079, Blast_Score=219, Evalue=6e-58, Organism=Saccharomyces cerevisiae, GI6320041, Length=363, Percent_Identity=35.2617079889807, Blast_Score=214, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6322427, Length=366, Percent_Identity=34.9726775956284, Blast_Score=212, Evalue=9e-56, Organism=Saccharomyces cerevisiae, GI6320224, Length=356, Percent_Identity=32.5842696629214, Blast_Score=211, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6323947, Length=399, Percent_Identity=31.077694235589, Blast_Score=201, Evalue=3e-52, Organism=Saccharomyces cerevisiae, GI6321963, Length=384, Percent_Identity=33.59375, Blast_Score=193, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6322912, Length=366, Percent_Identity=33.3333333333333, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6322323, Length=366, Percent_Identity=33.3333333333333, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6320449, Length=364, Percent_Identity=34.8901098901099, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6320173, Length=405, Percent_Identity=30.3703703703704, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6319714, Length=371, Percent_Identity=32.8840970350404, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6321111, Length=390, Percent_Identity=30, Blast_Score=176, Evalue=6e-45, Organism=Saccharomyces cerevisiae, GI6321267, Length=369, Percent_Identity=33.0623306233062, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6324620, Length=366, Percent_Identity=31.6939890710383, Blast_Score=172, Evalue=6e-44, Organism=Saccharomyces cerevisiae, GI6319618, Length=413, Percent_Identity=28.5714285714286, Blast_Score=165, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6320400, Length=423, Percent_Identity=29.3144208037825, Blast_Score=164, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6323306, Length=408, Percent_Identity=29.1666666666667, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6320119, Length=372, Percent_Identity=27.6881720430108, Blast_Score=157, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6322876, Length=403, Percent_Identity=31.2655086848635, Blast_Score=139, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6324366, Length=126, Percent_Identity=40.4761904761905, Blast_Score=91, Evalue=3e-19, Organism=Drosophila melanogaster, GI24662330, Length=350, Percent_Identity=39.1428571428571, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24584399, Length=344, Percent_Identity=37.7906976744186, Blast_Score=248, Evalue=6e-66, Organism=Drosophila melanogaster, GI21356161, Length=353, Percent_Identity=38.5269121813031, Blast_Score=238, Evalue=8e-63, Organism=Drosophila melanogaster, GI28574962, Length=338, Percent_Identity=38.4615384615385, Blast_Score=232, Evalue=4e-61, Organism=Drosophila melanogaster, GI24585582, Length=395, Percent_Identity=34.4303797468354, Blast_Score=230, Evalue=1e-60, Organism=Drosophila melanogaster, GI21355075, Length=360, Percent_Identity=35.8333333333333, Blast_Score=228, Evalue=9e-60, Organism=Drosophila melanogaster, GI17985987, Length=354, Percent_Identity=36.1581920903955, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI24644479, Length=337, Percent_Identity=38.5756676557863, Blast_Score=225, Evalue=4e-59, Organism=Drosophila melanogaster, GI24644483, Length=337, Percent_Identity=38.5756676557863, Blast_Score=225, Evalue=4e-59, Organism=Drosophila melanogaster, GI281361218, Length=337, Percent_Identity=38.5756676557863, Blast_Score=225, Evalue=4e-59, Organism=Drosophila melanogaster, GI24644481, Length=337, Percent_Identity=38.5756676557863, Blast_Score=225, Evalue=4e-59, Organism=Drosophila melanogaster, GI24644487, Length=337, Percent_Identity=38.5756676557863, Blast_Score=225, Evalue=5e-59, Organism=Drosophila melanogaster, GI45551833, Length=337, Percent_Identity=38.5756676557863, Blast_Score=225, Evalue=5e-59, Organism=Drosophila melanogaster, GI24644485, Length=337, Percent_Identity=38.5756676557863, Blast_Score=225, Evalue=5e-59, Organism=Drosophila melanogaster, GI18857967, Length=365, Percent_Identity=34.5205479452055, Blast_Score=224, Evalue=6e-59, Organism=Drosophila melanogaster, GI24642151, Length=351, Percent_Identity=35.042735042735, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24645031, Length=354, Percent_Identity=34.4632768361582, Blast_Score=222, Evalue=3e-58, Organism=Drosophila melanogaster, GI17977678, Length=346, Percent_Identity=35.5491329479769, Blast_Score=208, Evalue=6e-54, Organism=Drosophila melanogaster, GI24584994, Length=385, Percent_Identity=32.4675324675325, Blast_Score=202, Evalue=3e-52, Organism=Drosophila melanogaster, GI28571808, Length=345, Percent_Identity=33.3333333333333, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI28571809, Length=345, Percent_Identity=33.3333333333333, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI17136814, Length=377, Percent_Identity=33.9522546419098, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI28575014, Length=366, Percent_Identity=33.879781420765, Blast_Score=194, Evalue=8e-50, Organism=Drosophila melanogaster, GI24642822, Length=371, Percent_Identity=32.6145552560647, Blast_Score=194, Evalue=9e-50, Organism=Drosophila melanogaster, GI24583281, Length=366, Percent_Identity=31.6939890710383, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI24583279, Length=366, Percent_Identity=31.6939890710383, Blast_Score=192, Evalue=3e-49, Organism=Drosophila melanogaster, GI24582080, Length=361, Percent_Identity=34.3490304709141, Blast_Score=190, Evalue=1e-48, Organism=Drosophila melanogaster, GI24582078, Length=361, Percent_Identity=34.3490304709141, Blast_Score=190, Evalue=1e-48, Organism=Drosophila melanogaster, GI17136248, Length=361, Percent_Identity=34.3490304709141, Blast_Score=190, Evalue=1e-48, Organism=Drosophila melanogaster, GI24582075, Length=361, Percent_Identity=34.3490304709141, Blast_Score=190, Evalue=1e-48, Organism=Drosophila melanogaster, GI281365720, Length=298, Percent_Identity=37.248322147651, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24666101, Length=398, Percent_Identity=31.6582914572864, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI21355559, Length=386, Percent_Identity=30.5699481865285, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI24581954, Length=343, Percent_Identity=29.7376093294461, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI24581952, Length=343, Percent_Identity=29.7376093294461, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI24581956, Length=343, Percent_Identity=29.7376093294461, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI24643725, Length=400, Percent_Identity=28.25, Blast_Score=153, Evalue=2e-37, Organism=Drosophila melanogaster, GI20130173, Length=448, Percent_Identity=27.2321428571429, Blast_Score=152, Evalue=3e-37, Organism=Drosophila melanogaster, GI19920478, Length=390, Percent_Identity=29.7435897435897, Blast_Score=152, Evalue=3e-37, Organism=Drosophila melanogaster, GI17136666, Length=396, Percent_Identity=30.8080808080808, Blast_Score=151, Evalue=7e-37, Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=30.3680981595092, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI17647335, Length=359, Percent_Identity=29.5264623955432, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI24640164, Length=356, Percent_Identity=26.685393258427, Blast_Score=122, Evalue=5e-28, Organism=Drosophila melanogaster, GI18859659, Length=209, Percent_Identity=37.3205741626794, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI28571338, Length=209, Percent_Identity=37.3205741626794, Blast_Score=111, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 49015; Mature: 49015
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIDDLPVDRRLIISLSHLGFTETTEIQAKAVPIAVAGKDLLASSKTGSGKTLAYLLPAM CCCCCCCCCCEEEEEEHHCCCCCCCCEEEEEEEEEEECHHHHCCCCCCCCCHHHHHHHHH QRVLKTRALTKRDPRVLILTPTRELAKQVYAQLRLLVSNTSLKSTLVSGGENFNDQVKAL HHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHC DKDPHFVVGTPGRIVDHLKKGLLHLEGLELLILDEADRMLDLGFAEQLKAVNSAANHRLR CCCCCEEEECCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHH QTLLFSATLGHAEVNEFASELLKAPVRIAIGEENQQHSEISQRFYLADNLNQKEKLLFHF HHHHHHHHCCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHH IKNEEIKQAIIFTATRLDAQRLSAALSEKGYGTLALHGDLTQNNRNSIMDSFSRGKAQLL HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEE VTTDIASRGLDLLNVSHVINFDIPKHTEEYIHRIGRTGRAGEKGDAISIIGPKDWVNFKK EEECHHHCCCHHEEHHHEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCHHHCCHHH VEEFVQRQLTFNRVDGIKPQFKGIVEKVVKAPETKVVSHKAEKKQSSKTRKPKAAPNKIF HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH HEAEEAGFTPMRRKKKIEE HHHHHCCCCCHHHHHCCCC >Mature Secondary Structure MLIDDLPVDRRLIISLSHLGFTETTEIQAKAVPIAVAGKDLLASSKTGSGKTLAYLLPAM CCCCCCCCCCEEEEEEHHCCCCCCCCEEEEEEEEEEECHHHHCCCCCCCCCHHHHHHHHH QRVLKTRALTKRDPRVLILTPTRELAKQVYAQLRLLVSNTSLKSTLVSGGENFNDQVKAL HHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHC DKDPHFVVGTPGRIVDHLKKGLLHLEGLELLILDEADRMLDLGFAEQLKAVNSAANHRLR CCCCCEEEECCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHH QTLLFSATLGHAEVNEFASELLKAPVRIAIGEENQQHSEISQRFYLADNLNQKEKLLFHF HHHHHHHHCCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHH IKNEEIKQAIIFTATRLDAQRLSAALSEKGYGTLALHGDLTQNNRNSIMDSFSRGKAQLL HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEE VTTDIASRGLDLLNVSHVINFDIPKHTEEYIHRIGRTGRAGEKGDAISIIGPKDWVNFKK EEECHHHCCCHHEEHHHEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCHHHCCHHH VEEFVQRQLTFNRVDGIKPQFKGIVEKVVKAPETKVVSHKAEKKQSSKTRKPKAAPNKIF HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH HEAEEAGFTPMRRKKKIEE HHHHHCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2461520; 9278503 [H]