Click here to switch to the map view.

The map label for this gene is yadS [H]

Identifier: 119944631

GI number: 119944631

Start: 1091673

End: 1092299

Strand: Direct

Name: yadS [H]

Synonym: Ping_0870

Alternate gene names: 119944631

Gene position: 1091673-1092299 (Clockwise)

Preceding gene: 119944630

Following gene: 119944633

Centisome position: 23.94

GC content: 43.22

Gene sequence:

>627_bases
ATGTTAGAACAATTTATCTATATTGCAGATATGATTGGCGTTATCTCCTGTGCTATTTCAGGTGTGCTGGTAGCAACTAG
GTTACGTATGGATCCCGTTGGTATTATTGTGCTTGCAGCCGTGACCGGGATAGGTGGCGGCACACTTCGGGATATGATGA
TGGGAGCAACGCCAGTTTTTTGGATTGTTGATAATAATTATACTTATGTGATTACAATAACGGCTATTTTAACTGTTTTC
TGGTTAAAACATATTCATCGATCCCCGCCTTATCTATTAATGATATTAGATGCGTTTGGACTGGCAATCTTCACTATTGT
GGGTGCTCAAAAAGCATTAGCGTTAGGTTTTAGCGGACCTGTCGCTATTGCTATGGGGTGTATAACCGGGGTTGTGGGCG
GTATGATTCGGGATCTGTTAAGCGGTCAAATACCCTTTGTGTTACAAAAAGAGATCTATGCAACAGCCTCTGTTCTGGGT
GGAGTATTATTTGTATTATGCAGCTATCTTGAATTTACACCCATTTTAGCGATGAGCATCGCAATCAGCGGGACCTTATC
ACTACGCTTGAGTGCTATCTATTGGCACCTTTCCCTGCCCGTCTTTGCGTCGGACCGGGAAGCCTAA

Upstream 100 bases:

>100_bases
ATAAAGCAAAATAAAATCAACTAACTCAGTCCTTAAGCCTGTTTGGGTATATAATGTGCCATTTTTTATGAAATGGAGAA
TAATAAGTGGATAATCAAAG

Downstream 100 bases:

>100_bases
TTAATAAGGTTTTATAAGAATGAGAGGGTAAGCTATTAGTTAACCAGTGGGTATTGTAATTGCTCCCATAAAACCATATG
CCCGGTTAAGTCAATGAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MLEQFIYIADMIGVISCAISGVLVATRLRMDPVGIIVLAAVTGIGGGTLRDMMMGATPVFWIVDNNYTYVITITAILTVF
WLKHIHRSPPYLLMILDAFGLAIFTIVGAQKALALGFSGPVAIAMGCITGVVGGMIRDLLSGQIPFVLQKEIYATASVLG
GVLFVLCSYLEFTPILAMSIAISGTLSLRLSAIYWHLSLPVFASDREA

Sequences:

>Translated_208_residues
MLEQFIYIADMIGVISCAISGVLVATRLRMDPVGIIVLAAVTGIGGGTLRDMMMGATPVFWIVDNNYTYVITITAILTVF
WLKHIHRSPPYLLMILDAFGLAIFTIVGAQKALALGFSGPVAIAMGCITGVVGGMIRDLLSGQIPFVLQKEIYATASVLG
GVLFVLCSYLEFTPILAMSIAISGTLSLRLSAIYWHLSLPVFASDREA
>Mature_208_residues
MLEQFIYIADMIGVISCAISGVLVATRLRMDPVGIIVLAAVTGIGGGTLRDMMMGATPVFWIVDNNYTYVITITAILTVF
WLKHIHRSPPYLLMILDAFGLAIFTIVGAQKALALGFSGPVAIAMGCITGVVGGMIRDLLSGQIPFVLQKEIYATASVLG
GVLFVLCSYLEFTPILAMSIAISGTLSLRLSAIYWHLSLPVFASDREA

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=205, Percent_Identity=44.8780487804878, Blast_Score=151, Evalue=3e-38,
Organism=Escherichia coli, GI87082304, Length=183, Percent_Identity=36.0655737704918, Blast_Score=117, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 22276; Mature: 22276

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEQFIYIADMIGVISCAISGVLVATRLRMDPVGIIVLAAVTGIGGGTLRDMMMGATPVF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCEEE
WIVDNNYTYVITITAILTVFWLKHIHRSPPYLLMILDAFGLAIFTIVGAQKALALGFSGP
EEEECCEEEEEEHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHEECCCCH
VAIAMGCITGVVGGMIRDLLSGQIPFVLQKEIYATASVLGGVLFVLCSYLEFTPILAMSI
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AISGTLSLRLSAIYWHLSLPVFASDREA
HHHHHHHHEEEEEEEEEECCEECCCCCC
>Mature Secondary Structure
MLEQFIYIADMIGVISCAISGVLVATRLRMDPVGIIVLAAVTGIGGGTLRDMMMGATPVF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCEEE
WIVDNNYTYVITITAILTVFWLKHIHRSPPYLLMILDAFGLAIFTIVGAQKALALGFSGP
EEEECCEEEEEEHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHEECCCCH
VAIAMGCITGVVGGMIRDLLSGQIPFVLQKEIYATASVLGGVLFVLCSYLEFTPILAMSI
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AISGTLSLRLSAIYWHLSLPVFASDREA
HHHHHHHHEEEEEEEEEECCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA