Click here to switch to the map view.

The map label for this gene is yhbY [C]

Identifier: 119944571

GI number: 119944571

Start: 1011669

End: 1012001

Strand: Reverse

Name: yhbY [C]

Synonym: Ping_0809

Alternate gene names: 119944571

Gene position: 1012001-1011669 (Counterclockwise)

Preceding gene: 119944591

Following gene: 119944567

Centisome position: 22.19

GC content: 35.74

Gene sequence:

>333_bases
ATGCTTTGTTTTCAACCCTTAATCAAAGAAATAAGCATGAAATTATCAAATAAACAAAAGCAATACTTAAAAGGCCTTGC
CCATAGCTTAAAACCAGTTGTTCTATTAGGGCAAAATGGCTTAACGGAAGGCGTATTAGCTGAAATAGAAAATGCACTTA
GCCACCACGAACTCATCAAAATTAAAGTTTCAAGCGATGATCGCGAAACGAAACAGCTTATTATTGATGCGATTGTGCGT
GAAACTGAAGCACTTAACATCACTAAAATCGGCCATATTGTGGTTTTATTCCGACCAAGTGAAGATAAAAAAATAGAGCT
TCCGCGTAAATAA

Upstream 100 bases:

>100_bases
CCATCAATTTATTCCTTAACGTTAGTTATCTCCTGTGCTTAAAACAATAAACAGGTATAAGTAACAATCAAAATAGTAAA
GGTTAATATTTAAGGGTAGA

Downstream 100 bases:

>100_bases
TGATCAAAAGCATTATTAAAAAGCCCATTTTTAATGGGCTTTTTTGTGCTTTTTTATAAAATCAGGCAATATATTGAACG
CTGATAATTTCATAATCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MLCFQPLIKEISMKLSNKQKQYLKGLAHSLKPVVLLGQNGLTEGVLAEIENALSHHELIKIKVSSDDRETKQLIIDAIVR
ETEALNITKIGHIVVLFRPSEDKKIELPRK

Sequences:

>Translated_110_residues
MLCFQPLIKEISMKLSNKQKQYLKGLAHSLKPVVLLGQNGLTEGVLAEIENALSHHELIKIKVSSDDRETKQLIIDAIVR
ETEALNITKIGHIVVLFRPSEDKKIELPRK
>Mature_110_residues
MLCFQPLIKEISMKLSNKQKQYLKGLAHSLKPVVLLGQNGLTEGVLAEIENALSHHELIKIKVSSDDRETKQLIIDAIVR
ETEALNITKIGHIVVLFRPSEDKKIELPRK

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=97, Percent_Identity=70.1030927835051, Blast_Score=142, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 12435; Mature: 12435

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS01301 UPF0044

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCFQPLIKEISMKLSNKQKQYLKGLAHSLKPVVLLGQNGLTEGVLAEIENALSHHELIK
CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEE
IKVSSDDRETKQLIIDAIVRETEALNITKIGHIVVLFRPSEDKKIELPRK
EEECCCCHHHHHHHHHHHHHHHHCCCEEEECEEEEEEECCCCCEEECCCC
>Mature Secondary Structure
MLCFQPLIKEISMKLSNKQKQYLKGLAHSLKPVVLLGQNGLTEGVLAEIENALSHHELIK
CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEE
IKVSSDDRETKQLIIDAIVRETEALNITKIGHIVVLFRPSEDKKIELPRK
EEECCCCHHHHHHHHHHHHHHHHCCCEEEECEEEEEEECCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]