| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944557
Identifier: 119944557
GI number: 119944557
Start: 994825
End: 995115
Strand: Reverse
Name: 119944557
Synonym: Ping_0794
Alternate gene names: NA
Gene position: 995115-994825 (Counterclockwise)
Preceding gene: 119944565
Following gene: 119944525
Centisome position: 21.82
GC content: 36.43
Gene sequence:
>291_bases ATGCCTAGATTAATGTTAACTGATAAACGATGGGAAATGCTACTTCATTTAATGAAAAGCACAGGTCATATTTATAATAA ACCAGAGCACAGAAATACTTTTGAGGGAATTCTCTATCAACTTAGAACGGGTATTCCCTGGCGAGATTTGCCCAAAGAGT TTGGTGGCTGGAGTAGTATCTTCAGGCAGGGGGAAATTACGAACGACTTAATTCACATAATCAATCTAAATAGATTGAAA TTACCCTTCATTTATAACAACGAAAGTCCTGAAACAACTAGTTCTCGGTAA
Upstream 100 bases:
>100_bases CCAAGGCCCTAGGGCGTGTTGATCTTTCGAGTATGATTTTTAAACAGCATGGTAAAGCGTTATAATTTATTTCGCCAAAA ACTAACTACAACACTAAACC
Downstream 100 bases:
>100_bases CTATCACTGCGATTTGCTTGTTTATGCTTTCTCTTGATACCACCATCGAAAGACTTTTCATTCTTTAACAAGTTCAAGCT TGTATGTCGCACAGTTGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: ISSod6 Transposase; Transposase IS4 Family Protein; ISSod6 Transposase IS
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MPRLMLTDKRWEMLLHLMKSTGHIYNKPEHRNTFEGILYQLRTGIPWRDLPKEFGGWSSIFRQGEITNDLIHIINLNRLK LPFIYNNESPETTSSR
Sequences:
>Translated_96_residues MPRLMLTDKRWEMLLHLMKSTGHIYNKPEHRNTFEGILYQLRTGIPWRDLPKEFGGWSSIFRQGEITNDLIHIINLNRLK LPFIYNNESPETTSSR >Mature_95_residues PRLMLTDKRWEMLLHLMKSTGHIYNKPEHRNTFEGILYQLRTGIPWRDLPKEFGGWSSIFRQGEITNDLIHIINLNRLKL PFIYNNESPETTSSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11454; Mature: 11323
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLMLTDKRWEMLLHLMKSTGHIYNKPEHRNTFEGILYQLRTGIPWRDLPKEFGGWSSI CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCHHHH FRQGEITNDLIHIINLNRLKLPFIYNNESPETTSSR HHCCCCCHHHHHHHCCCCEECCEEECCCCCCCCCCC >Mature Secondary Structure PRLMLTDKRWEMLLHLMKSTGHIYNKPEHRNTFEGILYQLRTGIPWRDLPKEFGGWSSI CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCHHHH FRQGEITNDLIHIINLNRLKLPFIYNNESPETTSSR HHCCCCCHHHHHHHCCCCEECCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA