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The map label for this gene is capD [H]

Identifier: 119944552

GI number: 119944552

Start: 988903

End: 989940

Strand: Direct

Name: capD [H]

Synonym: Ping_0789

Alternate gene names: 119944552

Gene position: 988903-989940 (Clockwise)

Preceding gene: 119944551

Following gene: 119944553

Centisome position: 21.69

GC content: 38.25

Gene sequence:

>1038_bases
ATGTTCAAAAATAAAGTTTTATTAATAACTGGCGGTACTGGTTCATTTGGTAATGCAGTCTTGAAGCGTTTCTTGGATAC
GGATATTAAAGAAATTCGTATTTTTTCTCGGGATGAAAAAAAACAAGATGATATGCGCAAAGCATTTAACAATGATAAAT
TAAAGTTTTATATTGGTGATGTGCGGGATCCTCAAAGTATTTCAACTGCGATGCGCGGAGTTGATTATGTATTCCATGCA
GCTGCATTAAAACAGGTACCATCTTGTGAATTTTACCCATTAGAAGCAGTAAAAACCAATGTATTAGGCACTGAGAATGT
TTTAGAGTCTGCTATTTTTCACGGTGTAAGTCGTGTTGTTTGTTTAAGCACTGATAAAGCGGTGTATCCTATCAATGCGA
TGGGGATATCTAAGGCAATGATGGAAAAAGTAATTGTTGCTAAAAGCCGTAATTTAGCAGGCACCAACACAGTTATTTGT
GGTACGCGTTACGGCAATGTCATGGCTTCTCGTGGTTCTGTTATTCCTCTGTTTATCCGTCAAATTATTGAGGGCATGCC
ACTTACCCTTACTGACCCTTCGATGACACGTTTTATGATGACCTTGGATGATGCCGTTGATTTGGTATTGCATGCATTTA
CTTATGGTGTGAATGGGGATATTTTTGTGCAGAAAGCGCCCGCAGCTACGATTGAGGTCTTAACTAAAGCAATCTTAGAG
TTGATGAAAAAACCAGATCATAAAGTGAATGTGATTGGTACACGTCATGGTGAAAAGCTATTTGAAGCATTATGCAGCCG
TGAAGAGATGTTTGTCGCTCAAGATCAAGGTGAATATTACCGAGTTCCAGCTGATAATCGTGATTTGAATTATTCAAAAT
ACTTCGAAGAGGGTGAACAAGACCTCTCTGCCGTAGAAGATTATAACTCACACAATACAGAACGTTTAGATGTTGAGGGA
ATGAAGACCTTATTACGTAAACTCGATTTTATGCGTGATATCGAGAGTGGTAATCTAACTGTTCCAGAAGGTGTATAA

Upstream 100 bases:

>100_bases
CTGACGAGCTATATAATCATATTTTAAGTACGAGAAACAAAGAAAATATATTTTTTAGAGATAAATACTCAATTGGTAGA
TGGGAGTTTTAAGGGGACAT

Downstream 100 bases:

>100_bases
ATGAAAGTTTTGATTATTGGTGCAACAGGTATGCTAGGTTATAGCCTATTCCAGAACCTTTGTGATGTAGCTCATTTAGA
TGTTTATGGAACAGTTCGCA

Product: fused dTDP-4-dehydrorhamnose reductase and 3-beta hydroxysteroid dehydrogenase/isomerase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MFKNKVLLITGGTGSFGNAVLKRFLDTDIKEIRIFSRDEKKQDDMRKAFNNDKLKFYIGDVRDPQSISTAMRGVDYVFHA
AALKQVPSCEFYPLEAVKTNVLGTENVLESAIFHGVSRVVCLSTDKAVYPINAMGISKAMMEKVIVAKSRNLAGTNTVIC
GTRYGNVMASRGSVIPLFIRQIIEGMPLTLTDPSMTRFMMTLDDAVDLVLHAFTYGVNGDIFVQKAPAATIEVLTKAILE
LMKKPDHKVNVIGTRHGEKLFEALCSREEMFVAQDQGEYYRVPADNRDLNYSKYFEEGEQDLSAVEDYNSHNTERLDVEG
MKTLLRKLDFMRDIESGNLTVPEGV

Sequences:

>Translated_345_residues
MFKNKVLLITGGTGSFGNAVLKRFLDTDIKEIRIFSRDEKKQDDMRKAFNNDKLKFYIGDVRDPQSISTAMRGVDYVFHA
AALKQVPSCEFYPLEAVKTNVLGTENVLESAIFHGVSRVVCLSTDKAVYPINAMGISKAMMEKVIVAKSRNLAGTNTVIC
GTRYGNVMASRGSVIPLFIRQIIEGMPLTLTDPSMTRFMMTLDDAVDLVLHAFTYGVNGDIFVQKAPAATIEVLTKAILE
LMKKPDHKVNVIGTRHGEKLFEALCSREEMFVAQDQGEYYRVPADNRDLNYSKYFEEGEQDLSAVEDYNSHNTERLDVEG
MKTLLRKLDFMRDIESGNLTVPEGV
>Mature_345_residues
MFKNKVLLITGGTGSFGNAVLKRFLDTDIKEIRIFSRDEKKQDDMRKAFNNDKLKFYIGDVRDPQSISTAMRGVDYVFHA
AALKQVPSCEFYPLEAVKTNVLGTENVLESAIFHGVSRVVCLSTDKAVYPINAMGISKAMMEKVIVAKSRNLAGTNTVIC
GTRYGNVMASRGSVIPLFIRQIIEGMPLTLTDPSMTRFMMTLDDAVDLVLHAFTYGVNGDIFVQKAPAATIEVLTKAILE
LMKKPDHKVNVIGTRHGEKLFEALCSREEMFVAQDQGEYYRVPADNRDLNYSKYFEEGEQDLSAVEDYNSHNTERLDVEG
MKTLLRKLDFMRDIESGNLTVPEGV

Specific function: Epimerizes UDP-galactose to UDP-glucose [H]

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869
- InterPro:   IPR013692 [H]

Pfam domain/function: PF08485 Polysacc_syn_2C; PF02719 Polysacc_synt_2 [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 38654; Mature: 38654

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKNKVLLITGGTGSFGNAVLKRFLDTDIKEIRIFSRDEKKQDDMRKAFNNDKLKFYIGD
CCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHEECCCCCHHHHHHHHHHCCCCEEEEECC
VRDPQSISTAMRGVDYVFHAAALKQVPSCEFYPLEAVKTNVLGTENVLESAIFHGVSRVV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHHHEE
CLSTDKAVYPINAMGISKAMMEKVIVAKSRNLAGTNTVICGTRYGNVMASRGSVIPLFIR
EEECCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEECCCCCCHHHHHH
QIIEGMPLTLTDPSMTRFMMTLDDAVDLVLHAFTYGVNGDIFVQKAPAATIEVLTKAILE
HHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHH
LMKKPDHKVNVIGTRHGEKLFEALCSREEMFVAQDQGEYYRVPADNRDLNYSKYFEEGEQ
HHHCCCCEEEEEECCCHHHHHHHHHCCCCEEEEECCCCEEECCCCCCCCCHHHHHHHHHH
DLSAVEDYNSHNTERLDVEGMKTLLRKLDFMRDIESGNLTVPEGV
HHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHCCCCCEECCCCC
>Mature Secondary Structure
MFKNKVLLITGGTGSFGNAVLKRFLDTDIKEIRIFSRDEKKQDDMRKAFNNDKLKFYIGD
CCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHEECCCCCHHHHHHHHHHCCCCEEEEECC
VRDPQSISTAMRGVDYVFHAAALKQVPSCEFYPLEAVKTNVLGTENVLESAIFHGVSRVV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHHHEE
CLSTDKAVYPINAMGISKAMMEKVIVAKSRNLAGTNTVICGTRYGNVMASRGSVIPLFIR
EEECCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEECCCCCCHHHHHH
QIIEGMPLTLTDPSMTRFMMTLDDAVDLVLHAFTYGVNGDIFVQKAPAATIEVLTKAILE
HHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHH
LMKKPDHKVNVIGTRHGEKLFEALCSREEMFVAQDQGEYYRVPADNRDLNYSKYFEEGEQ
HHHCCCCEEEEEECCCHHHHHHHHHCCCCEEEEECCCCEEECCCCCCCCCHHHHHHHHHH
DLSAVEDYNSHNTERLDVEGMKTLLRKLDFMRDIESGNLTVPEGV
HHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA