| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944551
Identifier: 119944551
GI number: 119944551
Start: 987920
End: 988894
Strand: Direct
Name: 119944551
Synonym: Ping_0788
Alternate gene names: NA
Gene position: 987920-988894 (Clockwise)
Preceding gene: 119944550
Following gene: 119944552
Centisome position: 21.67
GC content: 28.92
Gene sequence:
>975_bases ATGAATAAAATATTAGTGAATGGGACTGCCGCTAGAGAAGGCGGAGCTTTAACTATCATCAATCAGTTTTCAATGTCAAA AAAAGATGATGCTGAAAATTTTTATTATATATTATCTCCTCTAAAACCAGATGTTTGTCCCACAAATTATAAATGGATAA AAAAAGAAACTCGCGGACTGAACACTCTTTTTTTCTCTTTGTTTTTTTCTTGGTTTTATTGTGTTTTTTTTAGATGCAAT AAATTAATTAGCTTTTCCAACGTTAATACGATATTTCCTGTGAAAAATAAAGTGACATATTTTCACAACCTTTTGATTAT AAAAGGGGGAGGGGTGAAATATTTCATCATCAAGTTTATAATAACTTGGTGCAATCAAAAAGAACCTTTATACATATTTC AAACATCATATGTACAGGAACAATTTAAAAAGGAATTTCATTTTGAACCTAAGAATAAAATATTATGGCCAGGTGTTCTT CGAAATATAATTACACCTCGCCTTATAAAAAAAAACAATAGTATTTACAATCTAGTTGTTCCAATTACTAATATAAATCA TAGCCATAGAAATTTTAAAAAAATCATTCAATTCGCTAAGGTATTAGAAAAATATAACATCAATTTTCTAGTTACGGTTG AAACTCTTCCACAAGGTTTACCTGCAAATATTAAAGCAACGGGTCATTTGTCACGAGGCGACTTTCTTTTGTTAATTTAT AATAATGATGGAATATTAGTATCTTCCGAATTTGAAACCCTTTGCTTGCCTATATTTGAATCACTACAATTAAATCGCCC TGCATTTGTATTAGAAAAAGAATATGTGAAGGGTTTGAAAAGCACGTTTGGTGAAATTGAGGGGTTATTTTTATATGAAG ATTCTGACGAGCTATATAATCATATTTTAAGTACGAGAAACAAAGAAAATATATTTTTTAGAGATAAATACTCAATTGGT AGATGGGAGTTTTAA
Upstream 100 bases:
>100_bases ATACAGCACTCGGTGACTTAACACCGATTAACTATGAAAATTTACAAAGTCAGGGGCCTGTCGGTCTTGACCGGTGTAAC TGTATGATAAGAAGAACTAC
Downstream 100 bases:
>100_bases GGGGACATATGTTCAAAAATAAAGTTTTATTAATAACTGGCGGTACTGGTTCATTTGGTAATGCAGTCTTGAAGCGTTTC TTGGATACGGATATTAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MNKILVNGTAAREGGALTIINQFSMSKKDDAENFYYILSPLKPDVCPTNYKWIKKETRGLNTLFFSLFFSWFYCVFFRCN KLISFSNVNTIFPVKNKVTYFHNLLIIKGGGVKYFIIKFIITWCNQKEPLYIFQTSYVQEQFKKEFHFEPKNKILWPGVL RNIITPRLIKKNNSIYNLVVPITNINHSHRNFKKIIQFAKVLEKYNINFLVTVETLPQGLPANIKATGHLSRGDFLLLIY NNDGILVSSEFETLCLPIFESLQLNRPAFVLEKEYVKGLKSTFGEIEGLFLYEDSDELYNHILSTRNKENIFFRDKYSIG RWEF
Sequences:
>Translated_324_residues MNKILVNGTAAREGGALTIINQFSMSKKDDAENFYYILSPLKPDVCPTNYKWIKKETRGLNTLFFSLFFSWFYCVFFRCN KLISFSNVNTIFPVKNKVTYFHNLLIIKGGGVKYFIIKFIITWCNQKEPLYIFQTSYVQEQFKKEFHFEPKNKILWPGVL RNIITPRLIKKNNSIYNLVVPITNINHSHRNFKKIIQFAKVLEKYNINFLVTVETLPQGLPANIKATGHLSRGDFLLLIY NNDGILVSSEFETLCLPIFESLQLNRPAFVLEKEYVKGLKSTFGEIEGLFLYEDSDELYNHILSTRNKENIFFRDKYSIG RWEF >Mature_324_residues MNKILVNGTAAREGGALTIINQFSMSKKDDAENFYYILSPLKPDVCPTNYKWIKKETRGLNTLFFSLFFSWFYCVFFRCN KLISFSNVNTIFPVKNKVTYFHNLLIIKGGGVKYFIIKFIITWCNQKEPLYIFQTSYVQEQFKKEFHFEPKNKILWPGVL RNIITPRLIKKNNSIYNLVVPITNINHSHRNFKKIIQFAKVLEKYNINFLVTVETLPQGLPANIKATGHLSRGDFLLLIY NNDGILVSSEFETLCLPIFESLQLNRPAFVLEKEYVKGLKSTFGEIEGLFLYEDSDELYNHILSTRNKENIFFRDKYSIG RWEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37998; Mature: 37998
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKILVNGTAAREGGALTIINQFSMSKKDDAENFYYILSPLKPDVCPTNYKWIKKETRGL CCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCH NTLFFSLFFSWFYCVFFRCNKLISFSNVNTIFPVKNKVTYFHNLLIIKGGGVKYFIIKFI HHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEECCCCEEEEEEEEEEECCCCCHHHHHHH ITWCNQKEPLYIFQTSYVQEQFKKEFHFEPKNKILWPGVLRNIITPRLIKKNNSIYNLVV HHHCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCEECHHHHHHHCCCCEEECCCCEEEEEE PITNINHSHRNFKKIIQFAKVLEKYNINFLVTVETLPQGLPANIKATGHLSRGDFLLLIY EEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEE NNDGILVSSEFETLCLPIFESLQLNRPAFVLEKEYVKGLKSTFGEIEGLFLYEDSDELYN CCCCEEEECCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCEEEEEECCHHHHH HILSTRNKENIFFRDKYSIGRWEF HHHHCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure MNKILVNGTAAREGGALTIINQFSMSKKDDAENFYYILSPLKPDVCPTNYKWIKKETRGL CCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCH NTLFFSLFFSWFYCVFFRCNKLISFSNVNTIFPVKNKVTYFHNLLIIKGGGVKYFIIKFI HHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEECCCCEEEEEEEEEEECCCCCHHHHHHH ITWCNQKEPLYIFQTSYVQEQFKKEFHFEPKNKILWPGVLRNIITPRLIKKNNSIYNLVV HHHCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCEECHHHHHHHCCCCEEECCCCEEEEEE PITNINHSHRNFKKIIQFAKVLEKYNINFLVTVETLPQGLPANIKATGHLSRGDFLLLIY EEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEE NNDGILVSSEFETLCLPIFESLQLNRPAFVLEKEYVKGLKSTFGEIEGLFLYEDSDELYN CCCCEEEECCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCEEEEEECCHHHHH HILSTRNKENIFFRDKYSIGRWEF HHHHCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA