| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944544
Identifier: 119944544
GI number: 119944544
Start: 977598
End: 978926
Strand: Direct
Name: 119944544
Synonym: Ping_0778
Alternate gene names: NA
Gene position: 977598-978926 (Clockwise)
Preceding gene: 119944543
Following gene: 119944545
Centisome position: 21.44
GC content: 32.88
Gene sequence:
>1329_bases ATGGTAATGGGGTCACAAGTTTCTGGTGCAAGGTCTAAGAGATATCTAAAGCAGCTTAAAGGGGCTTTTGTCTTTAAAAT GTTGGCATTGATGGCCTCATTTCTTATTATACCAATAATGATTAAATATCTAGGTGCAATAAAATATGGAATCTGGTCAA CTTTATTGTCCATCCTATCCTGGGTGCTGATGTTTGACCTTGGAATTGGAAACGGTTTAAGAAATCGAATATCAGAATCA ATAGCAAAAAATGATCTCGTTTCCGTAAGGAAGTATATCTCAACTGCTTACGTTTCGATTGGTTTAGGCGCAGTGTGCAT TGGAGGGCTATTTTTCATAGGAAGTGAGTATATTCCCTGGAATCGTGTTTTTAATACTGAAATTATTACAAATAAAGAAT TGAAATTTGTTGTAAATATTTCAATGTTTTTTGTACTTGTAAATTTCCTTCTCTCGCTTATTAATCAAGTTTTAAATGCG GTACAAAAAGCGGAACAGACGATATTTAATCAGTTTTTATCAAATGTTTTGTCGTTAACATTTGTTTATGCCCTTTATCT ATATACTGAAAGTTCGATGGAGTATTTAGCTTTTTCGTATGGCATCTCCATTTTTATTTCAAACTCTATTTTTAGCATTT GGTTCTACAAATCGAACCCCGATTTCACACCCAGTTTTAGCTTTGTACGGAAGAATCGATTAGTTGATACTTTAGCATTA GGGTTAAGGTTTTTTGTTATTCAAATTGCAGTTGTGGTATTATTTACTACGGATAAATTGATGATCACGCAACTTTTAGG CCCTGCTTACGTTACGTCTTATGATGTTGTCTTCAAATTATTCACCGTTATTACCATTATTCATGGGATTATTGTTGCGC CATTATGGACTTCATATTCTGATGCATTTCATCGTGGGGATTACACTTGGATGAGAACGATGATGAATAAGCAATTGCAA GCTTTCGGCATAATATTTTTGGGGATACTTGTTCTCTCTTTAATTTCACCTTTTGTTATCGAAATATGGGTTGGAGAGAT ACCTCATCTAGATAATAAATTAATATACTTCTTAGCCGTTTTTACTTTTTTTCTAACTTGGAATAATGTTTTTGCTATAT TTTTAAATGGTATAAATGAAACTAAATTACAGATGCGAACTGCAATTGTCGCATCTGTTATTAACATCCCATTGTCTGTT TTTTTTGTGAAATATTTTAACATGGGAGTTGAAGGTGTTGTACTCGGCACTATTTTAGCGTTGAGTATATTTGCTTTTTT TGGCCCATATGAATCATATAAATTATTGTATAAGGTAAAAAATGACTGA
Upstream 100 bases:
>100_bases TTGTTGCTGATTCTACAAAATTAGAGTCGTTAACTGGCTGGAAGCCTAAAGTAAGCAAAGAAGATGGTGTTGGGCGAATG ATCGAGTGGCTGAGTCAGTA
Downstream 100 bases:
>100_bases ACTTGTAAGTATCCTGATTCCTGTTTTTAATCGTGAAACTCTGATAGAGGAAACACTTTATAGCGCATTAAATCAAACAT ACGGTAATATAGAAGTCGTG
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: O Antigen Flippase Wzx; O-Antigen Export Protein; Flippase Wzx
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MVMGSQVSGARSKRYLKQLKGAFVFKMLALMASFLIIPIMIKYLGAIKYGIWSTLLSILSWVLMFDLGIGNGLRNRISES IAKNDLVSVRKYISTAYVSIGLGAVCIGGLFFIGSEYIPWNRVFNTEIITNKELKFVVNISMFFVLVNFLLSLINQVLNA VQKAEQTIFNQFLSNVLSLTFVYALYLYTESSMEYLAFSYGISIFISNSIFSIWFYKSNPDFTPSFSFVRKNRLVDTLAL GLRFFVIQIAVVVLFTTDKLMITQLLGPAYVTSYDVVFKLFTVITIIHGIIVAPLWTSYSDAFHRGDYTWMRTMMNKQLQ AFGIIFLGILVLSLISPFVIEIWVGEIPHLDNKLIYFLAVFTFFLTWNNVFAIFLNGINETKLQMRTAIVASVINIPLSV FFVKYFNMGVEGVVLGTILALSIFAFFGPYESYKLLYKVKND
Sequences:
>Translated_442_residues MVMGSQVSGARSKRYLKQLKGAFVFKMLALMASFLIIPIMIKYLGAIKYGIWSTLLSILSWVLMFDLGIGNGLRNRISES IAKNDLVSVRKYISTAYVSIGLGAVCIGGLFFIGSEYIPWNRVFNTEIITNKELKFVVNISMFFVLVNFLLSLINQVLNA VQKAEQTIFNQFLSNVLSLTFVYALYLYTESSMEYLAFSYGISIFISNSIFSIWFYKSNPDFTPSFSFVRKNRLVDTLAL GLRFFVIQIAVVVLFTTDKLMITQLLGPAYVTSYDVVFKLFTVITIIHGIIVAPLWTSYSDAFHRGDYTWMRTMMNKQLQ AFGIIFLGILVLSLISPFVIEIWVGEIPHLDNKLIYFLAVFTFFLTWNNVFAIFLNGINETKLQMRTAIVASVINIPLSV FFVKYFNMGVEGVVLGTILALSIFAFFGPYESYKLLYKVKND >Mature_442_residues MVMGSQVSGARSKRYLKQLKGAFVFKMLALMASFLIIPIMIKYLGAIKYGIWSTLLSILSWVLMFDLGIGNGLRNRISES IAKNDLVSVRKYISTAYVSIGLGAVCIGGLFFIGSEYIPWNRVFNTEIITNKELKFVVNISMFFVLVNFLLSLINQVLNA VQKAEQTIFNQFLSNVLSLTFVYALYLYTESSMEYLAFSYGISIFISNSIFSIWFYKSNPDFTPSFSFVRKNRLVDTLAL GLRFFVIQIAVVVLFTTDKLMITQLLGPAYVTSYDVVFKLFTVITIIHGIIVAPLWTSYSDAFHRGDYTWMRTMMNKQLQ AFGIIFLGILVLSLISPFVIEIWVGEIPHLDNKLIYFLAVFTFFLTWNNVFAIFLNGINETKLQMRTAIVASVINIPLSV FFVKYFNMGVEGVVLGTILALSIFAFFGPYESYKLLYKVKND
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50237; Mature: 50237
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMGSQVSGARSKRYLKQLKGAFVFKMLALMASFLIIPIMIKYLGAIKYGIWSTLLSILS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WVLMFDLGIGNGLRNRISESIAKNDLVSVRKYISTAYVSIGLGAVCIGGLFFIGSEYIPW HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC NRVFNTEIITNKELKFVVNISMFFVLVNFLLSLINQVLNAVQKAEQTIFNQFLSNVLSLT CCEECCEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVYALYLYTESSMEYLAFSYGISIFISNSIFSIWFYKSNPDFTPSFSFVRKNRLVDTLAL HHHHHHHHHCCCHHHHHHHHHHHEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH GLRFFVIQIAVVVLFTTDKLMITQLLGPAYVTSYDVVFKLFTVITIIHGIIVAPLWTSYS HHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAFHRGDYTWMRTMMNKQLQAFGIIFLGILVLSLISPFVIEIWVGEIPHLDNKLIYFLAV HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH FTFFLTWNNVFAIFLNGINETKLQMRTAIVASVINIPLSVFFVKYFNMGVEGVVLGTILA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LSIFAFFGPYESYKLLYKVKND HHHHHHHCCCCCCEEEEEECCC >Mature Secondary Structure MVMGSQVSGARSKRYLKQLKGAFVFKMLALMASFLIIPIMIKYLGAIKYGIWSTLLSILS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WVLMFDLGIGNGLRNRISESIAKNDLVSVRKYISTAYVSIGLGAVCIGGLFFIGSEYIPW HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC NRVFNTEIITNKELKFVVNISMFFVLVNFLLSLINQVLNAVQKAEQTIFNQFLSNVLSLT CCEECCEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVYALYLYTESSMEYLAFSYGISIFISNSIFSIWFYKSNPDFTPSFSFVRKNRLVDTLAL HHHHHHHHHCCCHHHHHHHHHHHEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH GLRFFVIQIAVVVLFTTDKLMITQLLGPAYVTSYDVVFKLFTVITIIHGIIVAPLWTSYS HHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAFHRGDYTWMRTMMNKQLQAFGIIFLGILVLSLISPFVIEIWVGEIPHLDNKLIYFLAV HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH FTFFLTWNNVFAIFLNGINETKLQMRTAIVASVINIPLSVFFVKYFNMGVEGVVLGTILA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LSIFAFFGPYESYKLLYKVKND HHHHHHHCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA