| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yaiI [C]
Identifier: 119944525
GI number: 119944525
Start: 948521
End: 948976
Strand: Reverse
Name: yaiI [C]
Synonym: Ping_0754
Alternate gene names: 119944525
Gene position: 948976-948521 (Counterclockwise)
Preceding gene: 119944557
Following gene: 119944515
Centisome position: 20.81
GC content: 45.61
Gene sequence:
>456_bases ATGACAATATGGATTGATGCTGATGCTTGCCCGGTACCGGTAAGAGAGATGGTATTACGAGCAGGTCAGCGCACTGCCAC TGCATTGGTTTTTGTGGCTAATTCGCCTTTACCTGTTCCCAGACGCGCATTGGTTAAAACCGTGCAGGTGGCTCAGGGCT TTGATGTGGCAGATAATTATATTAGCCAACATGCAGTGATCAATGATCTGGTGATAACGCAAGATATACCGCTGGCGGCT GAAATTGTCGAGAAAGGCATAACAGCACTTAATCCAAGGGGAGAGCTTTATACTGAGGCGAACATCCGCCAGCGTCTGGC AATGCGTAATTTATCGGAAGAGCTAAGAAGCATGGGGCAAATCAGTGGCGGCCCAAATAAATTTGGAGATAAAGAAAAAC AAAACTTTGCTAATGCGTTAGATCGTTGGCTGCAAAAAGCTAAAAAAACGACCTAA
Upstream 100 bases:
>100_bases AAACTCACAATGCAGTTAGGGATGATTTTAACCAGCAAGGGTGAGCATCTTTTTAGTTCTTTTGGTATTATAGTCGCTGA CTTTTCAATAAGGATTATTA
Downstream 100 bases:
>100_bases GCTGTGGGTTATCAGCTATCGGCTGTCAGTAAAGGACGAGACCGGCTATCAGTAAAGAGCGAGATCGGCTATCGGCTGTC GGCTATAAGCGCTTTATATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MTIWIDADACPVPVREMVLRAGQRTATALVFVANSPLPVPRRALVKTVQVAQGFDVADNYISQHAVINDLVITQDIPLAA EIVEKGITALNPRGELYTEANIRQRLAMRNLSEELRSMGQISGGPNKFGDKEKQNFANALDRWLQKAKKTT
Sequences:
>Translated_151_residues MTIWIDADACPVPVREMVLRAGQRTATALVFVANSPLPVPRRALVKTVQVAQGFDVADNYISQHAVINDLVITQDIPLAA EIVEKGITALNPRGELYTEANIRQRLAMRNLSEELRSMGQISGGPNKFGDKEKQNFANALDRWLQKAKKTT >Mature_150_residues TIWIDADACPVPVREMVLRAGQRTATALVFVANSPLPVPRRALVKTVQVAQGFDVADNYISQHAVINDLVITQDIPLAAE IVEKGITALNPRGELYTEANIRQRLAMRNLSEELRSMGQISGGPNKFGDKEKQNFANALDRWLQKAKKTT
Specific function: Unknown
COG id: COG1671
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0178 family
Homologues:
Organism=Escherichia coli, GI87081732, Length=150, Percent_Identity=50, Blast_Score=157, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y754_PSYIN (A1SSZ1)
Other databases:
- EMBL: CP000510 - RefSeq: YP_942205.1 - STRING: A1SSZ1 - GeneID: 4623672 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_0754 - eggNOG: COG1671 - HOGENOM: HBG363074 - OMA: PLASRCV - PhylomeDB: A1SSZ1 - BioCyc: PING357804:PING_0754-MONOMER - HAMAP: MF_00489 - InterPro: IPR003791
Pfam domain/function: PF02639 DUF188
EC number: NA
Molecular weight: Translated: 16697; Mature: 16566
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIWIDADACPVPVREMVLRAGQRTATALVFVANSPLPVPRRALVKTVQVAQGFDVADNY CEEEECCCCCCCCHHHHHHHCCCCHHEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHH ISQHAVINDLVITQDIPLAAEIVEKGITALNPRGELYTEANIRQRLAMRNLSEELRSMGQ HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHC ISGGPNKFGDKEKQNFANALDRWLQKAKKTT CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TIWIDADACPVPVREMVLRAGQRTATALVFVANSPLPVPRRALVKTVQVAQGFDVADNY EEEECCCCCCCCHHHHHHHCCCCHHEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHH ISQHAVINDLVITQDIPLAAEIVEKGITALNPRGELYTEANIRQRLAMRNLSEELRSMGQ HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHC ISGGPNKFGDKEKQNFANALDRWLQKAKKTT CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA