| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yehS [H]
Identifier: 119944502
GI number: 119944502
Start: 925282
End: 925764
Strand: Direct
Name: yehS [H]
Synonym: Ping_0731
Alternate gene names: 119944502
Gene position: 925282-925764 (Clockwise)
Preceding gene: 119944501
Following gene: 119944510
Centisome position: 20.29
GC content: 34.78
Gene sequence:
>483_bases ATGATCACCAATGATGTTTTACGACGTGTACGTTATGCGTTCAAACTGAACGATAAAAAAATGCTAGAAATTTTTGCCTC GGTTGATAATGCAATTGACGAAACAACCCTACACAGCATCATAGCTAAAGAAGGTGAAGAAAATTTTGTTTTGTGTCAAG ATAGCTTGTTATCACTTTTTTTAGATGGTCTTATTAATGAAAAACGCGGTAAAAAAGAAGGCTCCAAGCCGGTTATACTA GCAGAAAATGTTTTTTTGCCTAACAATGATATTTTAAGAAAGCTACGTATCGCATTGAATTATAAAGATGAAGATATGTT AAAGATGTTAGCGCTAGCCGAATTCCCGATTTCTAAAAGTGAATTGTCAGCCTTATTTAGAAAACAGGATCACCGTAACT ACAAGCTATGTGGTGATCAACTGTTAAGATACTTCTTAAACGGTATTACTATTCATTTACGGGGTGACAAGGGCGAAGAT TAA
Upstream 100 bases:
>100_bases AAGTTAACGCGCTTTCTTTTTCCATAATAATTCTAAATTGGCATATTTTCGCTGTTTGCGTATAGTGTGCCTTCTAAAAA CCTAAACCTATTGAGAAATT
Downstream 100 bases:
>100_bases TCGCTTTCGGATCGCAAAGACTAAAAAGCCCGAAGCCGTCAGCCGTCAGCTGTCAGTTGTTAGCCGTCAGCTGTTAGCTG TCAGTTGTTAGCCGTCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MITNDVLRRVRYAFKLNDKKMLEIFASVDNAIDETTLHSIIAKEGEENFVLCQDSLLSLFLDGLINEKRGKKEGSKPVIL AENVFLPNNDILRKLRIALNYKDEDMLKMLALAEFPISKSELSALFRKQDHRNYKLCGDQLLRYFLNGITIHLRGDKGED
Sequences:
>Translated_160_residues MITNDVLRRVRYAFKLNDKKMLEIFASVDNAIDETTLHSIIAKEGEENFVLCQDSLLSLFLDGLINEKRGKKEGSKPVIL AENVFLPNNDILRKLRIALNYKDEDMLKMLALAEFPISKSELSALFRKQDHRNYKLCGDQLLRYFLNGITIHLRGDKGED >Mature_160_residues MITNDVLRRVRYAFKLNDKKMLEIFASVDNAIDETTLHSIIAKEGEENFVLCQDSLLSLFLDGLINEKRGKKEGSKPVIL AENVFLPNNDILRKLRIALNYKDEDMLKMLALAEFPISKSELSALFRKQDHRNYKLCGDQLLRYFLNGITIHLRGDKGED
Specific function: Unknown
COG id: COG4807
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788443, Length=158, Percent_Identity=42.4050632911392, Blast_Score=121, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009921 [H]
Pfam domain/function: PF07308 DUF1456 [H]
EC number: NA
Molecular weight: Translated: 18431; Mature: 18431
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITNDVLRRVRYAFKLNDKKMLEIFASVDNAIDETTLHSIIAKEGEENFVLCQDSLLSLF CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHH LDGLINEKRGKKEGSKPVILAENVFLPNNDILRKLRIALNYKDEDMLKMLALAEFPISKS HHHHHHHHCCCCCCCCCEEEECCEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHH ELSALFRKQDHRNYKLCGDQLLRYFLNGITIHLRGDKGED HHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEECCCCCC >Mature Secondary Structure MITNDVLRRVRYAFKLNDKKMLEIFASVDNAIDETTLHSIIAKEGEENFVLCQDSLLSLF CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHH LDGLINEKRGKKEGSKPVILAENVFLPNNDILRKLRIALNYKDEDMLKMLALAEFPISKS HHHHHHHHCCCCCCCCCEEEECCEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHH ELSALFRKQDHRNYKLCGDQLLRYFLNGITIHLRGDKGED HHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]