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The map label for this gene is tolR [H]

Identifier: 119944496

GI number: 119944496

Start: 918542

End: 918979

Strand: Direct

Name: tolR [H]

Synonym: Ping_0725

Alternate gene names: 119944496

Gene position: 918542-918979 (Clockwise)

Preceding gene: 119944495

Following gene: 119944497

Centisome position: 20.15

GC content: 43.15

Gene sequence:

>438_bases
ATGCAACAATATTCATATCGAAGCCCCAAAAGACGCCGCGTTATTGCTGAAATTAATGTCGTTCCTTATATCGACGTTAT
GTTGGTTTTATTAATTATTTTTATGGTAACCGCTCCCCTTGTGACACAGGGAGTTAAAGTTGATTTGCCGCAAGCTGCCG
CAGAAACCCTGGCGGAAGACAGTAAACCGCCAATGATCGCTTCCATCGATAAACAGGGTCGCTATTATTTAAGTGTTGGT
GAGAGTATTGAGTCGCCGATTGATGGGCAGCAGATGACGGCTTTAGTTCGCGCACAATTAGCGATCGATCCCAATGCTCA
ATTTGTGGTTAAAGGTGATGGGGATGTTAACTATAAAAGCGTTATAGACTTAATGGTTTTGTTGCAATCTGCTGGTGTGC
CTTCCATTGGACTAATGACTGAGCCAGAAGAAGAATGA

Upstream 100 bases:

>100_bases
CACAAGTGGGTAAATTAGAAACGGCATATATTAACTTAATGGAAGAATTCACCTCCATTTTACACCGTCAGTCAACGACT
GAAAGTGACTAGGGAAGGTT

Downstream 100 bases:

>100_bases
AAAATAGATCAACATTAATTGCGTTTATTGGCGCACTTTTGATGCATATTATTGTTGGCACTCTGTTGCTTTTGAATGTG
AATTTTTCCAACCCTAAAAT

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MQQYSYRSPKRRRVIAEINVVPYIDVMLVLLIIFMVTAPLVTQGVKVDLPQAAAETLAEDSKPPMIASIDKQGRYYLSVG
ESIESPIDGQQMTALVRAQLAIDPNAQFVVKGDGDVNYKSVIDLMVLLQSAGVPSIGLMTEPEEE

Sequences:

>Translated_145_residues
MQQYSYRSPKRRRVIAEINVVPYIDVMLVLLIIFMVTAPLVTQGVKVDLPQAAAETLAEDSKPPMIASIDKQGRYYLSVG
ESIESPIDGQQMTALVRAQLAIDPNAQFVVKGDGDVNYKSVIDLMVLLQSAGVPSIGLMTEPEEE
>Mature_145_residues
MQQYSYRSPKRRRVIAEINVVPYIDVMLVLLIIFMVTAPLVTQGVKVDLPQAAAETLAEDSKPPMIASIDKQGRYYLSVG
ESIESPIDGQQMTALVRAQLAIDPNAQFVVKGDGDVNYKSVIDLMVLLQSAGVPSIGLMTEPEEE

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1786959, Length=128, Percent_Identity=41.40625, Blast_Score=81, Evalue=3e-17,
Organism=Escherichia coli, GI1789380, Length=127, Percent_Identity=34.6456692913386, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15909; Mature: 15909

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQYSYRSPKRRRVIAEINVVPYIDVMLVLLIIFMVTAPLVTQGVKVDLPQAAAETLAED
CCCCCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHCC
SKPPMIASIDKQGRYYLSVGESIESPIDGQQMTALVRAQLAIDPNAQFVVKGDGDVNYKS
CCCCEEEEECCCCCEEEEECCHHCCCCCHHHHHHHHHHHHEECCCCEEEEECCCCCCHHH
VIDLMVLLQSAGVPSIGLMTEPEEE
HHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQQYSYRSPKRRRVIAEINVVPYIDVMLVLLIIFMVTAPLVTQGVKVDLPQAAAETLAED
CCCCCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHCC
SKPPMIASIDKQGRYYLSVGESIESPIDGQQMTALVRAQLAIDPNAQFVVKGDGDVNYKS
CCCCEEEEECCCCCEEEEECCHHCCCCCHHHHHHHHHHHHEECCCCEEEEECCCCCCHHH
VIDLMVLLQSAGVPSIGLMTEPEEE
HHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]