Click here to switch to the map view.

The map label for this gene is fdhC [H]

Identifier: 119944474

GI number: 119944474

Start: 894175

End: 894987

Strand: Direct

Name: fdhC [H]

Synonym: Ping_0703

Alternate gene names: 119944474

Gene position: 894175-894987 (Clockwise)

Preceding gene: 119944473

Following gene: 119944475

Centisome position: 19.61

GC content: 40.1

Gene sequence:

>813_bases
ATGTCTTATATTGAACCGAGTGAATTTGTTACCAAGATGGTTGATTCTGGTGAACAAAAAATATACATGTCTACTAAAGA
CACCCTTATCCGTGGATTCATGGCCGGCGCTATTTTAGGTTTAGCTGCCGTTTTTGCAATAACGGTGGCAACAAAAACAG
GTAGCCCTATATTAGGCGCAGTTCTTTTCCCTGTTGGTTTTATTATGCTGTATTTAATGAAATTTGACTTACTAACCGGT
GTATTTACACTTGCGCCACTGGCGTTATTGGATAAACGTCCTGGGGTAACCTTTGGCGGTGTCATGCGCAATTGGGGTCT
AGTATTTCTTGGTAACTTTGCTGGAGCATTAACAACTGCCTTTTTAATGTCTTTTATTTTAACCTATGGTTATTCAACGG
ACGGTGGTGCTATCGCCGCTAAGGTGAGTACTATTGGTGAATCAAGAACCTTAGGTTATCAAGAACATGGTGTTGGTGGT
TGGCTCACTATCTTTGTTCGCGGTATGTTATGTAACTGGATGGTATCAATGGGCGTTGTTGGTGCAATGATATCAACTTC
TGCGGGTGCTAAAATGGCGGCAATGTGGATGCCTGTTATGTTGTTCTTCTACATGGGATTTGAGCATTCAATTGTAAATA
TGTTTTTATTCCCGTTCTCTATGATTATGGGCGGTGAATTTACCGTGACTGATTACATATTATGGAACGAAGTACCTACT
GTTCTTGGTAACTTAGTAGGTGGCTTATTATTTGTAGCTTTACCCTTGTATTATACACATGTTAAGACATCACCAGCGCG
TAAACTTGTTTAA

Upstream 100 bases:

>100_bases
AGATCTTTTTGAAAATAAGTGGAAATTAGCAGTTTTCCACTTGTCTTTGTCATTGAAATGCATGTTATTGAATAATTTAA
TATTAAAAGTGAGAATTTAA

Downstream 100 bases:

>100_bases
TAGAAACCTTTAATTAATACCTTTAAAGCGCCAAAGTAATAACACTTTGGCGCTTTTTTATAAATATTAGCTATAAAATT
ATTCACATAAAGAGAATGAT

Product: formate/nitrite transporter

Products: formate [Periplasm]; formate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MSYIEPSEFVTKMVDSGEQKIYMSTKDTLIRGFMAGAILGLAAVFAITVATKTGSPILGAVLFPVGFIMLYLMKFDLLTG
VFTLAPLALLDKRPGVTFGGVMRNWGLVFLGNFAGALTTAFLMSFILTYGYSTDGGAIAAKVSTIGESRTLGYQEHGVGG
WLTIFVRGMLCNWMVSMGVVGAMISTSAGAKMAAMWMPVMLFFYMGFEHSIVNMFLFPFSMIMGGEFTVTDYILWNEVPT
VLGNLVGGLLFVALPLYYTHVKTSPARKLV

Sequences:

>Translated_270_residues
MSYIEPSEFVTKMVDSGEQKIYMSTKDTLIRGFMAGAILGLAAVFAITVATKTGSPILGAVLFPVGFIMLYLMKFDLLTG
VFTLAPLALLDKRPGVTFGGVMRNWGLVFLGNFAGALTTAFLMSFILTYGYSTDGGAIAAKVSTIGESRTLGYQEHGVGG
WLTIFVRGMLCNWMVSMGVVGAMISTSAGAKMAAMWMPVMLFFYMGFEHSIVNMFLFPFSMIMGGEFTVTDYILWNEVPT
VLGNLVGGLLFVALPLYYTHVKTSPARKLV
>Mature_269_residues
SYIEPSEFVTKMVDSGEQKIYMSTKDTLIRGFMAGAILGLAAVFAITVATKTGSPILGAVLFPVGFIMLYLMKFDLLTGV
FTLAPLALLDKRPGVTFGGVMRNWGLVFLGNFAGALTTAFLMSFILTYGYSTDGGAIAAKVSTIGESRTLGYQEHGVGGW
LTIFVRGMLCNWMVSMGVVGAMISTSAGAKMAAMWMPVMLFFYMGFEHSIVNMFLFPFSMIMGGEFTVTDYILWNEVPTV
LGNLVGGLLFVALPLYYTHVKTSPARKLV

Specific function: May act as a formate transporter [H]

COG id: COG2116

COG function: function code P; Formate/nitrite family of transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FNT transporter (TC 2.A.44) family [H]

Homologues:

Organism=Escherichia coli, GI1787132, Length=278, Percent_Identity=28.4172661870504, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1788837, Length=280, Percent_Identity=24.2857142857143, Blast_Score=67, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6321779, Length=270, Percent_Identity=24.8148148148148, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000292 [H]

Pfam domain/function: PF01226 Form_Nir_trans [H]

EC number: NA

Molecular weight: Translated: 29268; Mature: 29137

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS00133 CARBOXYPEPT_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
7.4 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHCCCCHHCCC
>Mature Secondary Structure 
SYIEPSEFVTKMVDSGEQKIYMSTKDTLIRGFMAGAILGLAAVFAITVATKTGSPILGA
CCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
VLFPVGFIMLYLMKFDLLTGVFTLAPLALLDKRPGVTFGGVMRNWGLVFLGNFAGALTTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEHHHHHHHHHH
FLMSFILTYGYSTDGGAIAAKVSTIGESRTLGYQEHGVGGWLTIFVRGMLCNWMVSMGVV
HHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHH
GAMISTSAGAKMAAMWMPVMLFFYMGFEHSIVNMFLFPFSMIMGGEFTVTDYILWNEVPT
HHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHH
VLGNLVGGLLFVALPLYYTHVKTSPARKLV
HHHHHHHHHHHHHHHHHHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate [Cytoplasm]; formate [Periplasm] [C]

Specific reaction: formate [Cytoplasm] = formate [Periplasm] formate [Periplasm] = formate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9006048 [H]