| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is add [H]
Identifier: 119944464
GI number: 119944464
Start: 881628
End: 882635
Strand: Direct
Name: add [H]
Synonym: Ping_0692
Alternate gene names: 119944464
Gene position: 881628-882635 (Clockwise)
Preceding gene: 119944461
Following gene: 119944465
Centisome position: 19.34
GC content: 40.28
Gene sequence:
>1008_bases ATGTCAGAAATAAATTTTGATTGGTTAAATGCATTACCAAAAGTTGAATTACACCTGCACTTAGAGGGCAGTTTAGAGCC AGAGTTAATGTTTACACTGGCAAAACGTAATAATGTGAAGATCCCTTTTACGTCCGTTGAGCAGATTAAAGAAGCCTACC AATTTAATAATCTGCAGGACTTTTTAGATATCTATTATCAAGGCGCAGACGTCTTGGTCGTTGAGCAGGATTTTTATGAT TTAACCTGGGCTTATTTATTGAAATGTCAGCAACAAAATGTATTGCATGTTGAACCATTTTTTGATCCGCAAACCCATAC GGCACGCGGTATTGATTTTTCAACCATTATCGATGGGATAAACCGTGCATTAGTTGATGGACGTGAAAAATTAGGTATCA GCAGTGAATTAATACTGTGTTTTTTACGTCATCTTAGCGAAGATGACGCCTTTATTACATTACAACAGGCCATCCCCCAT TTAGATAAAATTAAGGCAGTTGGTTTAGACAGCTCGGAAAAAGGGCATCCGCCGGAAAAATTCAGTCGAGTATTTGCCAA AGCGCGGGAGCTGGGATTATTAACCGTGGCCCATGCGGGAGAGGAGGGGCCTGCTGAGTATATTTGGACTGCGCTTAATG ATTTAAAAGTATCACGTGTTGATCATGGTGTCAGTGCCATTTTCGATAAGGCGCTGATGGAGTATTTAATTGCGGCACAG ATGCCGCTAACGATTTGCCCGTTATCCAATACCAAGTTGAAAGTGTTTGCTGATATGTCTGAGCATACTATTTTACAAAT GTTGGAACTGGGTGTTTGTGTGACGGTCAATTCTGATGATCCTGCCTATTTCGGCGGTTATATGACCGAAAACTTTGTTG TCTTGAGGGATTCATTAGCCATGACAAAAGCACAAGCAAAACGGCTAGTGAGCAATAGTATTAAGGGCAGTTTTACCTCG CTTGAATATAAAAACACAATGCAGCAACAACTTGCTGATTATCGTTAA
Upstream 100 bases:
>100_bases ATGCTGGAAGATGATTTATCAATAAAAGCTAAGCTACAACAAGAGTCAAAACTTAAAGCGTTAAGCTTATAATAATAAAA ATGAGAAGGTGAACGTAAGT
Downstream 100 bases:
>100_bases TTATTATGGACTAATGTTATTAGTCAGTTTTTAAGTTTTTACTGCTTTAATCAAGTAAGGCTCAATGCATTAAAAGCAAA GCCATTAAGCTATCTGATTA
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSEINFDWLNALPKVELHLHLEGSLEPELMFTLAKRNNVKIPFTSVEQIKEAYQFNNLQDFLDIYYQGADVLVVEQDFYD LTWAYLLKCQQQNVLHVEPFFDPQTHTARGIDFSTIIDGINRALVDGREKLGISSELILCFLRHLSEDDAFITLQQAIPH LDKIKAVGLDSSEKGHPPEKFSRVFAKARELGLLTVAHAGEEGPAEYIWTALNDLKVSRVDHGVSAIFDKALMEYLIAAQ MPLTICPLSNTKLKVFADMSEHTILQMLELGVCVTVNSDDPAYFGGYMTENFVVLRDSLAMTKAQAKRLVSNSIKGSFTS LEYKNTMQQQLADYR
Sequences:
>Translated_335_residues MSEINFDWLNALPKVELHLHLEGSLEPELMFTLAKRNNVKIPFTSVEQIKEAYQFNNLQDFLDIYYQGADVLVVEQDFYD LTWAYLLKCQQQNVLHVEPFFDPQTHTARGIDFSTIIDGINRALVDGREKLGISSELILCFLRHLSEDDAFITLQQAIPH LDKIKAVGLDSSEKGHPPEKFSRVFAKARELGLLTVAHAGEEGPAEYIWTALNDLKVSRVDHGVSAIFDKALMEYLIAAQ MPLTICPLSNTKLKVFADMSEHTILQMLELGVCVTVNSDDPAYFGGYMTENFVVLRDSLAMTKAQAKRLVSNSIKGSFTS LEYKNTMQQQLADYR >Mature_334_residues SEINFDWLNALPKVELHLHLEGSLEPELMFTLAKRNNVKIPFTSVEQIKEAYQFNNLQDFLDIYYQGADVLVVEQDFYDL TWAYLLKCQQQNVLHVEPFFDPQTHTARGIDFSTIIDGINRALVDGREKLGISSELILCFLRHLSEDDAFITLQQAIPHL DKIKAVGLDSSEKGHPPEKFSRVFAKARELGLLTVAHAGEEGPAEYIWTALNDLKVSRVDHGVSAIFDKALMEYLIAAQM PLTICPLSNTKLKVFADMSEHTILQMLELGVCVTVNSDDPAYFGGYMTENFVVLRDSLAMTKAQAKRLVSNSIKGSFTSL EYKNTMQQQLADYR
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=331, Percent_Identity=24.4712990936556, Blast_Score=105, Evalue=5e-23, Organism=Escherichia coli, GI1787910, Length=326, Percent_Identity=26.3803680981595, Blast_Score=140, Evalue=1e-34, Organism=Caenorhabditis elegans, GI32565969, Length=346, Percent_Identity=22.5433526011561, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17538512, Length=346, Percent_Identity=22.5433526011561, Blast_Score=75, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6324188, Length=333, Percent_Identity=44.7447447447448, Blast_Score=291, Evalue=1e-79, Organism=Drosophila melanogaster, GI24645260, Length=339, Percent_Identity=23.598820058997, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 37887; Mature: 37756
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEINFDWLNALPKVELHLHLEGSLEPELMFTLAKRNNVKIPFTSVEQIKEAYQFNNLQD CCCCCCHHHCCCCCEEEEEEECCCCCHHHEEEEECCCCEECCCHHHHHHHHHHHCCCHHH FLDIYYQGADVLVVEQDFYDLTWAYLLKCQQQNVLHVEPFFDPQTHTARGIDFSTIIDGI HHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH NRALVDGREKLGISSELILCFLRHLSEDDAFITLQQAIPHLDKIKAVGLDSSEKGHPPEK HHHHHCCHHHCCCCHHHHHHHHHHCCCCCCEEEHHHHCCCHHHHHEECCCCCCCCCCHHH FSRVFAKARELGLLTVAHAGEEGPAEYIWTALNDLKVSRVDHGVSAIFDKALMEYLIAAQ HHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC MPLTICPLSNTKLKVFADMSEHTILQMLELGVCVTVNSDDPAYFGGYMTENFVVLRDSLA CCEEEECCCCCEEEEEECCHHHHHHHHHHCCEEEEECCCCCCEECCCCCCCEEEEEHHHH MTKAQAKRLVSNSIKGSFTSLEYKNTMQQQLADYR HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEINFDWLNALPKVELHLHLEGSLEPELMFTLAKRNNVKIPFTSVEQIKEAYQFNNLQD CCCCCHHHCCCCCEEEEEEECCCCCHHHEEEEECCCCEECCCHHHHHHHHHHHCCCHHH FLDIYYQGADVLVVEQDFYDLTWAYLLKCQQQNVLHVEPFFDPQTHTARGIDFSTIIDGI HHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH NRALVDGREKLGISSELILCFLRHLSEDDAFITLQQAIPHLDKIKAVGLDSSEKGHPPEK HHHHHCCHHHCCCCHHHHHHHHHHCCCCCCEEEHHHHCCCHHHHHEECCCCCCCCCCHHH FSRVFAKARELGLLTVAHAGEEGPAEYIWTALNDLKVSRVDHGVSAIFDKALMEYLIAAQ HHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC MPLTICPLSNTKLKVFADMSEHTILQMLELGVCVTVNSDDPAYFGGYMTENFVVLRDSLA CCEEEECCCCCEEEEEECCHHHHHHHHHHCCEEEEECCCCCCEECCCCCCCEEEEEHHHH MTKAQAKRLVSNSIKGSFTSLEYKNTMQQQLADYR HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA