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The map label for this gene is ompA [H]

Identifier: 119944462

GI number: 119944462

Start: 877988

End: 878983

Strand: Reverse

Name: ompA [H]

Synonym: Ping_0690

Alternate gene names: 119944462

Gene position: 878983-877988 (Counterclockwise)

Preceding gene: 119944463

Following gene: 119944460

Centisome position: 19.28

GC content: 43.78

Gene sequence:

>996_bases
ATGTCTAAAATGAATTACATACTGCCATTGGCATTACTGGTCTCCGGTGCAGCAACTGCCGCAACCGAAGCAACTGAAAA
CCCTTGGTATACCGGTGCCCGCTTGGGTGGCGCTCACTATAGTGATTTTGCGGAGAACATCTGGACACCGGATAATCAAG
ATCAGAATGATCTTGCGGGCGGTATTTTCCTAGGTTATAACTACAAACCATGGTTGGCTGTTGAAACAGGTTACACATAC
CTTGGTGAAGCTCAGTTTGGAAACAATCGCTCCGTCGAACAACAAGGCATCGATCTTGTTGGTAAATTCACTTGGCAAGC
AACAGATTCTCTTGATGTTTTCGCTAAGGCCGGCGGATTTTACTACTTTGCTGATGGCAAAGGTGAGTTTAACACTTCTC
ACGATAGAGGGCTGATTCCAACTACAGGTGCTGGTGTAGAATACTTTTTCAATAAAAACGTCTCTGCACGCCTTGAGTAT
CAATACTATCATGATATAGATCTTAAAGATTCAGGGGTCGATACTAGCTGGAATACGCATTTTTATGGTGTCAGTCTAGT
TTATAGCTGGGGTGCACCTGCGCCAATAACAATGACAGCTATGGAACCAGCGGTTGCTGAGCCACAAAAAACAATTGACA
TTGAGCCACTGATCATTGAAATACCCTTTGCGTTTGATAGTGTTAAATTAGCACCTAAATATATCGACCAATTAAAACCC
ATTGCACAGCAGCTCATTAAATACCCGGAAGCAGAGTTAATCGTCATTGGTCATACTGATAGCACCGGCCCAGAGTCTTA
CAATCAACAGTTATCTGAGCGACGTGCAGCATTAGTTGCTGATTACTTAGCAACTCACTTTGCTATTGCTAAAAACCGCA
TCAAGGAAAGTGGTCGCGGCGAACTAGCGCCAAAAGCAAGTAATGCAACCAAAGACGGACGAGCGTTAAACCGTCGTGTA
TCAGTATTTACACCCGGCTTAACCGTTGTAAAATAA

Upstream 100 bases:

>100_bases
AGAGTAGGAAAAAATAAAGAATTAACTTACCAAAAGTACAAAAGCTTCTCACATTGTAGAGGCAATGATAAAAACTATAC
ATAACTAAAAGGATATAACT

Downstream 100 bases:

>100_bases
ATATACTTACTTAAGTAGCAATTCGCATCAATAAAAAGGCTAATGTTACGCAGTAAAAATAAATGATTGTCAGGTATTTG
ATTGAGTAACAGCGGCTTAT

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MSKMNYILPLALLVSGAATAATEATENPWYTGARLGGAHYSDFAENIWTPDNQDQNDLAGGIFLGYNYKPWLAVETGYTY
LGEAQFGNNRSVEQQGIDLVGKFTWQATDSLDVFAKAGGFYYFADGKGEFNTSHDRGLIPTTGAGVEYFFNKNVSARLEY
QYYHDIDLKDSGVDTSWNTHFYGVSLVYSWGAPAPITMTAMEPAVAEPQKTIDIEPLIIEIPFAFDSVKLAPKYIDQLKP
IAQQLIKYPEAELIVIGHTDSTGPESYNQQLSERRAALVADYLATHFAIAKNRIKESGRGELAPKASNATKDGRALNRRV
SVFTPGLTVVK

Sequences:

>Translated_331_residues
MSKMNYILPLALLVSGAATAATEATENPWYTGARLGGAHYSDFAENIWTPDNQDQNDLAGGIFLGYNYKPWLAVETGYTY
LGEAQFGNNRSVEQQGIDLVGKFTWQATDSLDVFAKAGGFYYFADGKGEFNTSHDRGLIPTTGAGVEYFFNKNVSARLEY
QYYHDIDLKDSGVDTSWNTHFYGVSLVYSWGAPAPITMTAMEPAVAEPQKTIDIEPLIIEIPFAFDSVKLAPKYIDQLKP
IAQQLIKYPEAELIVIGHTDSTGPESYNQQLSERRAALVADYLATHFAIAKNRIKESGRGELAPKASNATKDGRALNRRV
SVFTPGLTVVK
>Mature_330_residues
SKMNYILPLALLVSGAATAATEATENPWYTGARLGGAHYSDFAENIWTPDNQDQNDLAGGIFLGYNYKPWLAVETGYTYL
GEAQFGNNRSVEQQGIDLVGKFTWQATDSLDVFAKAGGFYYFADGKGEFNTSHDRGLIPTTGAGVEYFFNKNVSARLEYQ
YYHDIDLKDSGVDTSWNTHFYGVSLVYSWGAPAPITMTAMEPAVAEPQKTIDIEPLIIEIPFAFDSVKLAPKYIDQLKPI
AQQLIKYPEAELIVIGHTDSTGPESYNQQLSERRAALVADYLATHFAIAKNRIKESGRGELAPKASNATKDGRALNRRVS
VFTPGLTVVK

Specific function: Required for the action of colicins K and L and for the stabilization of mating aggregates in conjugation. Serves as a receptor for a number of T-even like phages. Also acts as a porin with low permeability that allows slow penetration of small solutes [H

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=342, Percent_Identity=32.4561403508772, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI48994946, Length=110, Percent_Identity=39.0909090909091, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1788957, Length=102, Percent_Identity=40.1960784313725, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR006664
- InterPro:   IPR002368
- InterPro:   IPR006690
- InterPro:   IPR000498
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA; PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 36467; Mature: 36336

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKMNYILPLALLVSGAATAATEATENPWYTGARLGGAHYSDFAENIWTPDNQDQNDLAG
CCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCCCCC
GIFLGYNYKPWLAVETGYTYLGEAQFGNNRSVEQQGIDLVGKFTWQATDSLDVFAKAGGF
EEEEECCCCCEEEEECCCEEEEECCCCCCCCHHHHCCEEEEEEEEECCCCCEEEEECCCE
YYFADGKGEFNTSHDRGLIPTTGAGVEYFFNKNVSARLEYQYYHDIDLKDSGVDTSWNTH
EEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCE
FYGVSLVYSWGAPAPITMTAMEPAVAEPQKTIDIEPLIIEIPFAFDSVKLAPKYIDQLKP
EEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEECCHHHHHHHHH
IAQQLIKYPEAELIVIGHTDSTGPESYNQQLSERRAALVADYLATHFAIAKNRIKESGRG
HHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ELAPKASNATKDGRALNRRVSVFTPGLTVVK
CCCCCCCCCCCCCHHHHCEEEEEECCEEEEC
>Mature Secondary Structure 
SKMNYILPLALLVSGAATAATEATENPWYTGARLGGAHYSDFAENIWTPDNQDQNDLAG
CCCHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCCCCC
GIFLGYNYKPWLAVETGYTYLGEAQFGNNRSVEQQGIDLVGKFTWQATDSLDVFAKAGGF
EEEEECCCCCEEEEECCCEEEEECCCCCCCCHHHHCCEEEEEEEEECCCCCEEEEECCCE
YYFADGKGEFNTSHDRGLIPTTGAGVEYFFNKNVSARLEYQYYHDIDLKDSGVDTSWNTH
EEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCE
FYGVSLVYSWGAPAPITMTAMEPAVAEPQKTIDIEPLIIEIPFAFDSVKLAPKYIDQLKP
EEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEECCHHHHHHHHH
IAQQLIKYPEAELIVIGHTDSTGPESYNQQLSERRAALVADYLATHFAIAKNRIKESGRG
HHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ELAPKASNATKDGRALNRRVSVFTPGLTVVK
CCCCCCCCCCCCCHHHHCEEEEEECCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]