| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944442
Identifier: 119944442
GI number: 119944442
Start: 859357
End: 859926
Strand: Direct
Name: 119944442
Synonym: Ping_0670
Alternate gene names: NA
Gene position: 859357-859926 (Clockwise)
Preceding gene: 119944441
Following gene: 119944443
Centisome position: 18.85
GC content: 35.44
Gene sequence:
>570_bases ATGAGTATGGAATTATTAGTCGAAGTCTTAGGTTGGACGAGTGTCCTTTTTTATATTTTATTATTGGTTTTTAATGGCAT GAAAAGAGTGCGTCTTGCTTCTTTTCTTTCTGTTGCTAATGATACCCTTTGGGGATTGCTAATCGGTGTTATGCCTAAGG TGTTACTGAACTTAGTCGTTGGTGGTGTTACTTTATACCGTTATGCTTGTGATTTTACTAAGACCCCTAAAAAAATTATT AACCTATTGTTAGTACTGATGTTGGCTGGTTTTGCTTATTTTGCCAATTTTGCAATTAACAGTTATTTGGCAAATCCATC CTTAGGATTGTTACTAACTTGGGTTGATTTTACGGTGATATTAACCGCATTAAGTATGAAACGTCTGCGTTTATTTCAAA TTTTAATGCTTAGCTCAGCGTTCGTCGGAGGTTATGCCTATTACCTGCTTGGCATTGAACAGATGGTGGTGATTAAAATA ATTGTCGGTATGCTGACAACTTATAAAATTTTTATTCACCCGGTTTTTCCACAGCTTGAAAACAAGCTATTATTTTGGAA AGCGGCTTAA
Upstream 100 bases:
>100_bases TGGGCGAATTTAGTGGGTTAGATCATTTATTAACAAAAAAAGAAAGAGTAAACTACTGCCTCTTTTAAAAATAATGTCAC AGTGGAGATAGTAGTCAAAA
Downstream 100 bases:
>100_bases TCGTTTATTCATCTTAATTAAATCGGGTATTAGAAAATGATAGCTTGTGGATCCTTGTCTTTTGATGGGGATTTTTTACT TGTTAGCGTGCGTTTAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSMELLVEVLGWTSVLFYILLLVFNGMKRVRLASFLSVANDTLWGLLIGVMPKVLLNLVVGGVTLYRYACDFTKTPKKII NLLLVLMLAGFAYFANFAINSYLANPSLGLLLTWVDFTVILTALSMKRLRLFQILMLSSAFVGGYAYYLLGIEQMVVIKI IVGMLTTYKIFIHPVFPQLENKLLFWKAA
Sequences:
>Translated_189_residues MSMELLVEVLGWTSVLFYILLLVFNGMKRVRLASFLSVANDTLWGLLIGVMPKVLLNLVVGGVTLYRYACDFTKTPKKII NLLLVLMLAGFAYFANFAINSYLANPSLGLLLTWVDFTVILTALSMKRLRLFQILMLSSAFVGGYAYYLLGIEQMVVIKI IVGMLTTYKIFIHPVFPQLENKLLFWKAA >Mature_188_residues SMELLVEVLGWTSVLFYILLLVFNGMKRVRLASFLSVANDTLWGLLIGVMPKVLLNLVVGGVTLYRYACDFTKTPKKIIN LLLVLMLAGFAYFANFAINSYLANPSLGLLLTWVDFTVILTALSMKRLRLFQILMLSSAFVGGYAYYLLGIEQMVVIKII VGMLTTYKIFIHPVFPQLENKLLFWKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21331; Mature: 21200
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMELLVEVLGWTSVLFYILLLVFNGMKRVRLASFLSVANDTLWGLLIGVMPKVLLNLVV CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGVTLYRYACDFTKTPKKIINLLLVLMLAGFAYFANFAINSYLANPSLGLLLTWVDFTVI HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LTALSMKRLRLFQILMLSSAFVGGYAYYLLGIEQMVVIKIIVGMLTTYKIFIHPVFPQLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NKLLFWKAA CCEEEEECC >Mature Secondary Structure SMELLVEVLGWTSVLFYILLLVFNGMKRVRLASFLSVANDTLWGLLIGVMPKVLLNLVV CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGVTLYRYACDFTKTPKKIINLLLVLMLAGFAYFANFAINSYLANPSLGLLLTWVDFTVI HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LTALSMKRLRLFQILMLSSAFVGGYAYYLLGIEQMVVIKIIVGMLTTYKIFIHPVFPQLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NKLLFWKAA CCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA