Click here to switch to the map view.

The map label for this gene is 119944384

Identifier: 119944384

GI number: 119944384

Start: 793705

End: 794112

Strand: Reverse

Name: 119944384

Synonym: Ping_0611

Alternate gene names: NA

Gene position: 794112-793705 (Counterclockwise)

Preceding gene: 119944385

Following gene: 119944377

Centisome position: 17.42

GC content: 44.36

Gene sequence:

>408_bases
TTGGTGGCTATAAGGCAAATTACTCGTGGAATCGATCTGTATTCCAAAAAAATGAGTAAAGATTTTGGCCTGACCAGTCC
GCAATTAATGTTAATGCGTACGATTCAACGCGATAATCATGTCACCATTCGTCAATTATCGGAAAAGACTAATATGAGTC
AGGCAACAGCAACCATTATTCTTGATCGGCTGGAGGCCCGCGGGCGAGTAGTGCGTATACGCAATCAACAGGATAAGCGT
AAAGTACATGCTCTGCTCACCGAATCCGGTCAGCAGATGTTAGCGCAAGAGCCCAGTATCTTGCAACCAGGCTTTCTGGA
GCAATTTCAGGCGCTGGAAATTTGGGAACAAAACCTGATATTGTCTTCATTACAGCGTTTATCAAGCATGATGAATACCC
AGGACTAG

Upstream 100 bases:

>100_bases
CAAATAATAGATAGTCAAAGAAAGTAAAAATACAGAGGCTACTGCGCTAGCCTCTGTATTTAAATAAAAGGAGTTTGATA
TCGAAACAAGTGATAAAGTC

Downstream 100 bases:

>100_bases
AGCCGAGTCTATTGAACAAAGCACTAACAAAAACAGCCACAATAGCGGCTGTTTTTAATAGGATATGTTGCGTTTTTTAA
ACTGAAAGGCAGTCAAACTC

Product: transcriptional regulator of MarR family protein

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator TrmB; Regulatory Protein MarR; Transcriptional Regulator Of MarR Family Protein; Transcriptional Regulator MarR Family Protein; HTH-Type Transcriptional Regulator; MarR Family Regulatory Protein; MarR-Family Transcriptional Regulator; Transcriptional Regulator BlaI/MecI/CopY Family; MarR Family Regulatory Helix-Turn-Helix

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MVAIRQITRGIDLYSKKMSKDFGLTSPQLMLMRTIQRDNHVTIRQLSEKTNMSQATATIILDRLEARGRVVRIRNQQDKR
KVHALLTESGQQMLAQEPSILQPGFLEQFQALEIWEQNLILSSLQRLSSMMNTQD

Sequences:

>Translated_135_residues
MVAIRQITRGIDLYSKKMSKDFGLTSPQLMLMRTIQRDNHVTIRQLSEKTNMSQATATIILDRLEARGRVVRIRNQQDKR
KVHALLTESGQQMLAQEPSILQPGFLEQFQALEIWEQNLILSSLQRLSSMMNTQD
>Mature_135_residues
MVAIRQITRGIDLYSKKMSKDFGLTSPQLMLMRTIQRDNHVTIRQLSEKTNMSQATATIILDRLEARGRVVRIRNQQDKR
KVHALLTESGQQMLAQEPSILQPGFLEQFQALEIWEQNLILSSLQRLSSMMNTQD

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15597; Mature: 15597

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAIRQITRGIDLYSKKMSKDFGLTSPQLMLMRTIQRDNHVTIRQLSEKTNMSQATATII
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHH
LDRLEARGRVVRIRNQQDKRKVHALLTESGQQMLAQEPSILQPGFLEQFQALEIWEQNLI
HHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
LSSLQRLSSMMNTQD
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MVAIRQITRGIDLYSKKMSKDFGLTSPQLMLMRTIQRDNHVTIRQLSEKTNMSQATATII
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHH
LDRLEARGRVVRIRNQQDKRKVHALLTESGQQMLAQEPSILQPGFLEQFQALEIWEQNLI
HHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
LSSLQRLSSMMNTQD
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA