| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119867142
Identifier: 119867142
GI number: 119867142
Start: 1174853
End: 1176424
Strand: Reverse
Name: 119867142
Synonym: Mkms_1090
Alternate gene names: NA
Gene position: 1176424-1174853 (Counterclockwise)
Preceding gene: 119867146
Following gene: 119867141
Centisome position: 20.51
GC content: 68.83
Gene sequence:
>1572_bases ATGGCCCCGTCCAGTCGGGACCTTTCGACGGGCCGTGAGGTCCGAAGACCGCTGCGGCAAACCCGTCCGCGAAGCGACCA TTGGCCCATGACCACCGCGGAGGAGACCGCTGCCGACGATTCGCCGGTGAACGACATGGCCGCCGAGGTGTACGAGACAC ACACCGGTGTGGTGCTACTGCTCGGCGAGAAGGCCTACAAGATCAAGAAGCCGGTGACCACGGACTTCCTCGATTTCAGC GCGCCGGAACAGCGGGAGCGGGTGTGCGCCCGCGAAGTGGAGTTGAACAGCCGCCTCGCGCCGGGCAGCTACCTCGGCGT CGCCCACATGCACGGACCCGGTCACGACGTGCCCGAACCGGTCGTGGTGATGCGCCGCTACCCCGACCGGTACCGGCTGC GGTCCATGGTGATACGCGGTGAGTCGACCGAGAATCACCTCACGATGCTCGCGAGCATGCTCGCCCGCTTCCATGCGACG GCGGACCGGCGCGCGGACATCGATGCCTGCGCGACAGCCGCCGCGGTCAGGGCGCGGTGGTGCGAGAACCTCGACGAGCT GGACCATTCCGCGGGTGCAGTGGTTTCGGCGCAGACGGTCGACGAGGTCCGCCGACTGGCGTTGCGGTATCTCGACGGCC GGGACGCGTTGTTCGCCGGCCGCATCGCCGACCGCCGCATCGTCGACGGTCACGGCGACCTGCTGGCCGACGACGTCTTC TGCACACCCGACGGCCCGGTTCCGTTGGACTGCCTGGAGTTCGACGACCGGCTGCGCTTCGTCGACGGCGTCGATGACGC CGCATTTCTGGCGATGGACCTGGAATTCCTGGGCCGGCGTGACCTGGCCGACCACTTCCTCGATCAGTACCAGGAACTCG CCGGGGACTCCGCGCCGCGCTCGCTGGTCGACTTCTACATCGCCTACCGCGCCGTCGTGCGCGCCAAGGTCGACTGCATC AAGGTCGGCCAGGGACACGAGGACGCGGCGGCCGACGCAGGGTGGCACCTGGACATCGCCGCCAACCACCTCAAAGCGGC CACGGTCCGGCTCGTCCTCGTCGGCGGGGGCCCAGGAACCGGTAAGACCACACTGTCGGGCGCCCTGGGTGAATCCGTTG GCGCCCATGTCATCTCGACCGACAATGTCCGTCGGGAACTTCAGGACTCCGGAGTCGTCCACGGCGCCGCCGGCGCTCTC GAGAGCGGGCTGTACTCACCCGAGAACGTGGCACTGGTGTACGACACCGTGCTGCATCGGGCGGCGGTGCTGCTCGCTCA CGGCGAGTCGGTGGTCCTCGACGGCACCTGGCGGGACCCGGGTCACCGCAGGGCGGCGCGTGACTGCGCCGACCGTTCAT CAGCCGTTCTGGTGGAACTGGCCTGCGATACCGAACTCTCGGCGGCCCAGACCCGGATCACGCACCGGACGTCGACCACC TCCGACGCCACCCCGCAGATCGCGGCCGACATCACGACGCCCGTCTGGCACGGCGCGCACCGTGTCGACACCGGCCGCCC GTTGGCCGACTCCGTGGCCGAAGCGCAGCAGATCTGTTGTCTGGCCTACTGA
Upstream 100 bases:
>100_bases ATCGATCAGCCTCCCTGTCCACCCGTTCTCCAGTCCACGCTCACAATCCGCCGGGTCCGGGACAAGAGTCTTTGGTCACA CGCCGAGCGGTTGAGGACCA
Downstream 100 bases:
>100_bases TCCACCACACCGATCCATGAAACCGAGGAGAATCCGACAATGCACGCAATGGTCTACCACGGCCCGGGGCGTCGATCGTG GGAGCAGGTGCCCGACCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 523; Mature: 522
Protein sequence:
>523_residues MAPSSRDLSTGREVRRPLRQTRPRSDHWPMTTAEETAADDSPVNDMAAEVYETHTGVVLLLGEKAYKIKKPVTTDFLDFS APEQRERVCAREVELNSRLAPGSYLGVAHMHGPGHDVPEPVVVMRRYPDRYRLRSMVIRGESTENHLTMLASMLARFHAT ADRRADIDACATAAAVRARWCENLDELDHSAGAVVSAQTVDEVRRLALRYLDGRDALFAGRIADRRIVDGHGDLLADDVF CTPDGPVPLDCLEFDDRLRFVDGVDDAAFLAMDLEFLGRRDLADHFLDQYQELAGDSAPRSLVDFYIAYRAVVRAKVDCI KVGQGHEDAAADAGWHLDIAANHLKAATVRLVLVGGGPGTGKTTLSGALGESVGAHVISTDNVRRELQDSGVVHGAAGAL ESGLYSPENVALVYDTVLHRAAVLLAHGESVVLDGTWRDPGHRRAARDCADRSSAVLVELACDTELSAAQTRITHRTSTT SDATPQIAADITTPVWHGAHRVDTGRPLADSVAEAQQICCLAY
Sequences:
>Translated_523_residues MAPSSRDLSTGREVRRPLRQTRPRSDHWPMTTAEETAADDSPVNDMAAEVYETHTGVVLLLGEKAYKIKKPVTTDFLDFS APEQRERVCAREVELNSRLAPGSYLGVAHMHGPGHDVPEPVVVMRRYPDRYRLRSMVIRGESTENHLTMLASMLARFHAT ADRRADIDACATAAAVRARWCENLDELDHSAGAVVSAQTVDEVRRLALRYLDGRDALFAGRIADRRIVDGHGDLLADDVF CTPDGPVPLDCLEFDDRLRFVDGVDDAAFLAMDLEFLGRRDLADHFLDQYQELAGDSAPRSLVDFYIAYRAVVRAKVDCI KVGQGHEDAAADAGWHLDIAANHLKAATVRLVLVGGGPGTGKTTLSGALGESVGAHVISTDNVRRELQDSGVVHGAAGAL ESGLYSPENVALVYDTVLHRAAVLLAHGESVVLDGTWRDPGHRRAARDCADRSSAVLVELACDTELSAAQTRITHRTSTT SDATPQIAADITTPVWHGAHRVDTGRPLADSVAEAQQICCLAY >Mature_522_residues APSSRDLSTGREVRRPLRQTRPRSDHWPMTTAEETAADDSPVNDMAAEVYETHTGVVLLLGEKAYKIKKPVTTDFLDFSA PEQRERVCAREVELNSRLAPGSYLGVAHMHGPGHDVPEPVVVMRRYPDRYRLRSMVIRGESTENHLTMLASMLARFHATA DRRADIDACATAAAVRARWCENLDELDHSAGAVVSAQTVDEVRRLALRYLDGRDALFAGRIADRRIVDGHGDLLADDVFC TPDGPVPLDCLEFDDRLRFVDGVDDAAFLAMDLEFLGRRDLADHFLDQYQELAGDSAPRSLVDFYIAYRAVVRAKVDCIK VGQGHEDAAADAGWHLDIAANHLKAATVRLVLVGGGPGTGKTTLSGALGESVGAHVISTDNVRRELQDSGVVHGAAGALE SGLYSPENVALVYDTVLHRAAVLLAHGESVVLDGTWRDPGHRRAARDCADRSSAVLVELACDTELSAAQTRITHRTSTTS DATPQIAADITTPVWHGAHRVDTGRPLADSVAEAQQICCLAY
Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]
COG id: COG2187
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR010488 [H]
Pfam domain/function: PF06414 Zeta_toxin [H]
EC number: NA
Molecular weight: Translated: 56845; Mature: 56714
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPSSRDLSTGREVRRPLRQTRPRSDHWPMTTAEETAADDSPVNDMAAEVYETHTGVVLL CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCEEEE LGEKAYKIKKPVTTDFLDFSAPEQRERVCAREVELNSRLAPGSYLGVAHMHGPGHDVPEP ECCCCHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCH VVVMRRYPDRYRLRSMVIRGESTENHLTMLASMLARFHATADRRADIDACATAAAVRARW HHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH CENLDELDHSAGAVVSAQTVDEVRRLALRYLDGRDALFAGRIADRRIVDGHGDLLADDVF HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEECCCCCEEECCEE CTPDGPVPLDCLEFDDRLRFVDGVDDAAFLAMDLEFLGRRDLADHFLDQYQELAGDSAPR ECCCCCCCCHHHCCCCHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHH SLVDFYIAYRAVVRAKVDCIKVGQGHEDAAADAGWHLDIAANHLKAATVRLVLVGGGPGT HHHHHHHHHHHHHHHHHHEEECCCCCCCHHCCCCCEEEHHHHHHEEEEEEEEEEECCCCC GKTTLSGALGESVGAHVISTDNVRRELQDSGVVHGAAGALESGLYSPENVALVYDTVLHR CCHHHHHHHHHHHCCEEEECHHHHHHHHHCCCEECCHHHHHHCCCCCCCEEEHHHHHHHH AAVLLAHGESVVLDGTWRDPGHRRAARDCADRSSAVLVELACDTELSAAQTRITHRTSTT HHHHEECCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCC SDATPQIAADITTPVWHGAHRVDTGRPLADSVAEAQQICCLAY CCCCCCHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure APSSRDLSTGREVRRPLRQTRPRSDHWPMTTAEETAADDSPVNDMAAEVYETHTGVVLL CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCEEEE LGEKAYKIKKPVTTDFLDFSAPEQRERVCAREVELNSRLAPGSYLGVAHMHGPGHDVPEP ECCCCHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCH VVVMRRYPDRYRLRSMVIRGESTENHLTMLASMLARFHATADRRADIDACATAAAVRARW HHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH CENLDELDHSAGAVVSAQTVDEVRRLALRYLDGRDALFAGRIADRRIVDGHGDLLADDVF HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEECCCCCEEECCEE CTPDGPVPLDCLEFDDRLRFVDGVDDAAFLAMDLEFLGRRDLADHFLDQYQELAGDSAPR ECCCCCCCCHHHCCCCHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHH SLVDFYIAYRAVVRAKVDCIKVGQGHEDAAADAGWHLDIAANHLKAATVRLVLVGGGPGT HHHHHHHHHHHHHHHHHHEEECCCCCCCHHCCCCCEEEHHHHHHEEEEEEEEEEECCCCC GKTTLSGALGESVGAHVISTDNVRRELQDSGVVHGAAGALESGLYSPENVALVYDTVLHR CCHHHHHHHHHHHCCEEEECHHHHHHHHHCCCEECCHHHHHHCCCCCCCEEEHHHHHHHH AAVLLAHGESVVLDGTWRDPGHRRAARDCADRSSAVLVELACDTELSAAQTRITHRTSTT HHHHEECCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCC SDATPQIAADITTPVWHGAHRVDTGRPLADSVAEAQQICCLAY CCCCCCHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]