Definition | Mycobacterium sp. KMS plasmid pMKMS02, complete sequence. |
---|---|
Accession | NC_008704 |
Length | 216,763 |
Click here to switch to the map view.
The map label for this gene is 119855231
Identifier: 119855231
GI number: 119855231
Start: 53763
End: 54206
Strand: Reverse
Name: 119855231
Synonym: Mkms_5845
Alternate gene names: NA
Gene position: 54206-53763 (Counterclockwise)
Preceding gene: 119855232
Following gene: 119855230
Centisome position: 25.01
GC content: 63.96
Gene sequence:
>444_bases ATGTCTACGTTCCTCGAACCACAGCGATGTGCCGACGATGTGACCGCCCTGAAAGTGATGACAGAGGAAATGCGCCCGCT TCTGATCGGCGACGGCTACCAGATGTTCGAGGTGCGCGCACCTGAATCATCTGGACCGCCTCCGCACCAGCATCCCTGGG ATGAAAGCTACGTGGTGCTCGAGGGCGTGCTGTGGGTAAGCCGCGGCGGCGAAGAAGCGACCCTGCAGGTGGGTGAGGCG ATTCGGGTGCCGGCCGGCGTCGTGCACGCCTATCGCGTTCTCTCTGACGGCGCCCGGTGGATCACGACCTCGTCTACCCC GGGCGGCGCGCTGGATTTCTTCTCCGATGTGGATGCCGCGTCCAACGGCCCCGGCGACGTGAGAGCCCTCATCGAGGCCG CGAAGCGAAACAGGGTCGAATTCGCCGATCCGGCATTGCAATAG
Upstream 100 bases:
>100_bases AAATGCCTCCCAATCTTTGACCCTTGACCATCAGGGGTTAAGAATATAGCGTTCCCTAAATATCCTTTCGCGCCGGACGA CCAAGAAGGAGGCCTCTGGA
Downstream 100 bases:
>100_bases CCGTCATTTTGATTTCTCAGCACGCACACGGCGCCGTGGTATGCCAAAAGTGTTGACAGCCGGCGCAGAAGGTGGCGTTG GGCCGGCTGCTGTCATGAGG
Product: cupin 2 domain-containing protein
Products: NA
Alternate protein names: Cupin Superfamily Protein; Cupin 2 Conserved Barrel; Cupin Region
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSTFLEPQRCADDVTALKVMTEEMRPLLIGDGYQMFEVRAPESSGPPPHQHPWDESYVVLEGVLWVSRGGEEATLQVGEA IRVPAGVVHAYRVLSDGARWITTSSTPGGALDFFSDVDAASNGPGDVRALIEAAKRNRVEFADPALQ
Sequences:
>Translated_147_residues MSTFLEPQRCADDVTALKVMTEEMRPLLIGDGYQMFEVRAPESSGPPPHQHPWDESYVVLEGVLWVSRGGEEATLQVGEA IRVPAGVVHAYRVLSDGARWITTSSTPGGALDFFSDVDAASNGPGDVRALIEAAKRNRVEFADPALQ >Mature_146_residues STFLEPQRCADDVTALKVMTEEMRPLLIGDGYQMFEVRAPESSGPPPHQHPWDESYVVLEGVLWVSRGGEEATLQVGEAI RVPAGVVHAYRVLSDGARWITTSSTPGGALDFFSDVDAASNGPGDVRALIEAAKRNRVEFADPALQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15939; Mature: 15808
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTFLEPQRCADDVTALKVMTEEMRPLLIGDGYQMFEVRAPESSGPPPHQHPWDESYVVL CCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEEECCCCCCCCCCCCCCCCCEEEE EGVLWVSRGGEEATLQVGEAIRVPAGVVHAYRVLSDGARWITTSSTPGGALDFFSDVDAA EEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHCCCCC SNGPGDVRALIEAAKRNRVEFADPALQ CCCCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure STFLEPQRCADDVTALKVMTEEMRPLLIGDGYQMFEVRAPESSGPPPHQHPWDESYVVL CCCCCHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEEECCCCCCCCCCCCCCCCCEEEE EGVLWVSRGGEEATLQVGEAIRVPAGVVHAYRVLSDGARWITTSSTPGGALDFFSDVDAA EEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHCCCCC SNGPGDVRALIEAAKRNRVEFADPALQ CCCCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA