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The map label for this gene is ycbL [H]

Identifier: 119855106

GI number: 119855106

Start: 229354

End: 230046

Strand: Direct

Name: ycbL [H]

Synonym: Mkms_5719

Alternate gene names: 119855106

Gene position: 229354-230046 (Clockwise)

Preceding gene: 119855105

Following gene: 119855112

Centisome position: 75.92

GC content: 66.23

Gene sequence:

>693_bases
GTGGCGGCCGCTGGCCGCATCCGTGTGCTACTGGTGGAGCCTCGACGCATCTATGCGGCCACCGTGGCGCGACACTTACG
CGCCGGCGGTTTCGCCGTGGAGGTGGCCTATTCGCCAGGTGCTGCACTCACAGGGCTGCGCGAGCGTGATCCCGATGTGG
TCGTGGTGGGCGTCGGCACTCAGGGGCTGGGCACGGCCATGCTTGACCGCATCCGTCAGGAAACTCAAGTCGGCGTGGTT
GCTCTCAGCGACGGCGATATTACGCCGCTGCTCGTGAGTACCGGGGTCGTCTGTGTGGGCGACATCGAGGCGCTGAACGT
GCGAATTCGGCTGGCGCTGAGGCGCTGCGGTGTCGGCGGCGAACCACGTGGCGGCGGCCACGGCGACGAGACGCATCGCC
GTGAGATCGGAGATCTCCGTATTGATGTGGCCGCGCGTCGGGTGTTCCTCCGCGACGAGCCATTGCCGCTCACCCGCACG
GAGTTTGAGATTCTCTGCACGCTGGCGGAGAGTCCCGGTGAACCGGTGACGTGTCGTCAATTGCAGCTGAGCCTGTGGGG
GGATGCGTCCGACGGTGGCCGGTCCACTCTGGGGGTGCATGTGGGTAATCTTCGGCGCAAGCTGGGTGAGGACCCACACT
CACCGCGGTATCTCCGTACGGTGCGCGGGACCGGTTACTGTCTGACCGGCTAA

Upstream 100 bases:

>100_bases
TGCAGTGAGGATGCATAGGCGCGCTTTAGTTTTCGTGAACGGCTAGGAGAATGCCACGACGATCGAGTCGCACCGCTATG
TCGCTGGTTCCGTACCGCCA

Downstream 100 bases:

>100_bases
GTGGGGGCAGCGAGTGCCTGGTGCGCCGCAGTGATGCAGCTGGTGACAGATTGCGGCGAGGACTTAGCTTTCGATGATGC
GAACGACGTAGGGCGTCATC

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MAAAGRIRVLLVEPRRIYAATVARHLRAGGFAVEVAYSPGAALTGLRERDPDVVVVGVGTQGLGTAMLDRIRQETQVGVV
ALSDGDITPLLVSTGVVCVGDIEALNVRIRLALRRCGVGGEPRGGGHGDETHRREIGDLRIDVAARRVFLRDEPLPLTRT
EFEILCTLAESPGEPVTCRQLQLSLWGDASDGGRSTLGVHVGNLRRKLGEDPHSPRYLRTVRGTGYCLTG

Sequences:

>Translated_230_residues
MAAAGRIRVLLVEPRRIYAATVARHLRAGGFAVEVAYSPGAALTGLRERDPDVVVVGVGTQGLGTAMLDRIRQETQVGVV
ALSDGDITPLLVSTGVVCVGDIEALNVRIRLALRRCGVGGEPRGGGHGDETHRREIGDLRIDVAARRVFLRDEPLPLTRT
EFEILCTLAESPGEPVTCRQLQLSLWGDASDGGRSTLGVHVGNLRRKLGEDPHSPRYLRTVRGTGYCLTG
>Mature_229_residues
AAAGRIRVLLVEPRRIYAATVARHLRAGGFAVEVAYSPGAALTGLRERDPDVVVVGVGTQGLGTAMLDRIRQETQVGVVA
LSDGDITPLLVSTGVVCVGDIEALNVRIRLALRRCGVGGEPRGGGHGDETHRREIGDLRIDVAARRVFLRDEPLPLTRTE
FEILCTLAESPGEPVTCRQLQLSLWGDASDGGRSTLGVHVGNLRRKLGEDPHSPRYLRTVRGTGYCLTG

Specific function: Member of the two-component regulatory system ycbM/ycbL [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786911, Length=229, Percent_Identity=28.3842794759825, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789809, Length=125, Percent_Identity=33.6, Blast_Score=71, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24647; Mature: 24515

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAAGRIRVLLVEPRRIYAATVARHLRAGGFAVEVAYSPGAALTGLRERDPDVVVVGVGT
CCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCC
QGLGTAMLDRIRQETQVGVVALSDGDITPLLVSTGVVCVGDIEALNVRIRLALRRCGVGG
CCHHHHHHHHHHHHHHEEEEEECCCCCCEEHHHCCEEEEECCEEEEEEEEEEEHHCCCCC
EPRGGGHGDETHRREIGDLRIDVAARRVFLRDEPLPLTRTEFEILCTLAESPGEPVTCRQ
CCCCCCCCCHHHHHHHCCEEEEEEHEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEE
LQLSLWGDASDGGRSTLGVHVGNLRRKLGEDPHSPRYLRTVRGTGYCLTG
EEEEEECCCCCCCCEEEEEEHHHHHHHHCCCCCCCCEEEEECCCEEEECC
>Mature Secondary Structure 
AAAGRIRVLLVEPRRIYAATVARHLRAGGFAVEVAYSPGAALTGLRERDPDVVVVGVGT
CCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCC
QGLGTAMLDRIRQETQVGVVALSDGDITPLLVSTGVVCVGDIEALNVRIRLALRRCGVGG
CCHHHHHHHHHHHHHHEEEEEECCCCCCEEHHHCCEEEEECCEEEEEEEEEEEHHCCCCC
EPRGGGHGDETHRREIGDLRIDVAARRVFLRDEPLPLTRTEFEILCTLAESPGEPVTCRQ
CCCCCCCCCHHHHHHHCCEEEEEEHEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEE
LQLSLWGDASDGGRSTLGVHVGNLRRKLGEDPHSPRYLRTVRGTGYCLTG
EEEEEECCCCCCCCEEEEEEHHHHHHHHCCCCCCCCEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704254; 9384377 [H]